Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.119 Carica papaya HOM05D000987 ORTHO05D119534 1.1e-62 243.0 113 100.0
Atru.chr4.829 Acer truncatum HOM05D000987 ORTHO05D000831 3.6e-18 95.1 61 68.9
Thecc.01G127200 Theobroma cacao HOM05D000987 ORTHO05D000831 2.2e-15 85.9 60 61.7
Lj1g0028168 Lotus japonicus HOM05D000987 ORTHO05D000831 1.1e-14 83.6 64 62.5
Manes.12G153100 Manihot esculenta HOM05D000987 ORTHO05D000831 1.2e-13 80.1 63 58.7
Gohir.A11G056000 Gossypium hirsutum HOM05D000987 ORTHO05D000831 1.0e-12 77.0 58 60.3
Actinidia06652 Actinidia chinensis HOM05D000987 ORTHO05D000831 1.3e-12 76.6 61 60.7
Potri.007G107200 Populus trichocarpa HOM05D000987 ORTHO05D000831 1.3e-12 76.6 56 60.7
Ca_16930_v3 Cicer arietinum L. HOM05D000987 ORTHO05D000831 1.7e-12 76.3 64 57.8
TPR.G34647 Trifolium pratense HOM05D000987 ORTHO05D000831 2.3e-12 75.9 58 58.6
Gohir.D11G060100 Gossypium hirsutum HOM05D000987 ORTHO05D000831 3.0e-12 75.5 58 58.6
Gorai.007G064800 Gossypium raimondii HOM05D000987 ORTHO05D000831 3.0e-12 75.5 58 58.6
VMungo1309G0365 Vigna mungo HOM05D000987 ORTHO05D000831 3.9e-12 75.1 64 57.8
GSVIVG01026525001 Vitis vinifera HOM05D000987 ORTHO05D000831 3.9e-12 75.1 68 55.9
RcHm_v2.0_Chr2g0120261 Rosa chinensis HOM05D000987 ORTHO05D000831 1.5e-11 73.2 61 54.1
TWI79G1471 Tripterygium wilfordii HOM05D000987 ORTHO05D000831 5.6e-11 71.2 61 55.7
Glyma.04G214400 Glycine max HOM05D000987 ORTHO05D000831 7.3e-11 70.9 69 50.7
Medtr3g095910 Medicago truncatula HOM05D000987 ORTHO05D000831 9.5e-11 70.5 59 52.5
Sabra05G0051800 Salix brachista HOM05D000987 ORTHO05D000831 9.5e-11 70.5 74 51.4
Potri.005G061600 Populus trichocarpa HOM05D000987 ORTHO05D000831 2.1e-10 69.3 69 53.6
Cfa002829 Carpinus fangiana HOM05D000987 ORTHO05D000831 2.8e-10 68.9 69 52.2
Haze_25126 Corylus avellana HOM05D000987 ORTHO05D000831 2.8e-10 68.9 64 54.7
CANSAT01G1643 Cannabis sativa HOM05D000987 ORTHO05D000831 3.6e-10 68.6 66 53.0
arahy.Tifrunner.gnm1.ann1.31N5UK Arachis hypogaea HOM05D000987 ORTHO05D000831 4.7e-10 68.2 60 55.0
arahy.Tifrunner.gnm1.ann1.FFY9SF Arachis hypogaea HOM05D000987 ORTHO05D000831 4.7e-10 68.2 60 55.0
Psat5g056920 Pisum sativum HOM05D000987 ORTHO05D000831 6.2e-10 67.8 59 50.8
Phvul.009G148800 Phaseolus vulgaris HOM05D000987 ORTHO05D000831 1.8e-09 66.2 69 50.7
QL06p029466 Quercus lobata HOM05D000987 ORTHO05D000831 2.3e-09 65.9 61 52.5
Dinv41119 Davidia involucrata HOM05D000987 ORTHO05D000831 6.8e-09 64.3 60 58.3
Gohir.A10G082400 Gossypium hirsutum HOM05D000987 ORTHO05D000831 6.8e-09 64.3 54 51.9
CiPaw.03G128500 Carya illinoinensis HOM05D000987 ORTHO05D000831 1.2e-08 63.5 61 54.1
ClCG01G015520 Citrullus lanatus HOM05D000987 ORTHO05D000831 1.2e-08 63.5 59 54.2
Gohir.D10G106400 Gossypium hirsutum HOM05D000987 ORTHO05D000831 1.2e-08 63.5 54 51.9
Gorai.011G116600 Gossypium raimondii HOM05D000987 ORTHO05D000831 1.2e-08 63.5 54 51.9
Lalb_Chr08g0238471 Lupinus albus HOM05D000987 ORTHO05D000831 1.2e-08 63.5 71 49.3
Eucgr.H04942 Eucalyptus grandis HOM05D000987 ORTHO05D000831 2.0e-08 62.8 58 51.7
Rhsim10G0137000 Rhododendron simsii HOM05D000987 ORTHO05D000831 2.6e-08 62.4 65 49.2
Sed0016220 Sechium edule HOM05D000987 ORTHO05D000831 3.4e-08 62.0 57 54.4
CsaV3_6G041760 Cucumis sativus L. HOM05D000987 ORTHO05D000831 4.4e-08 61.6 57 54.4
vmacro12859 Vaccinium macrocarpon HOM05D000987 ORTHO05D000831 5.8e-08 61.2 65 47.7
Rhsim10G0136900 Rhododendron simsii HOM05D000987 ORTHO05D000831 7.5e-08 60.8 64 45.3
CAN.G267.5 Capsicum annuum HOM05D000987 ORTHO05D000831 9.9e-08 60.5 64 53.1
GSVIVG01010036001 Vitis vinifera HOM05D000987 ORTHO05D000831 1.3e-07 60.1 61 54.1
Nitab4.5_0009751g0010 Nicotiana tabacum HOM05D000987 ORTHO05D000831 2.9e-07 58.9 55 54.5
Eucgr.F02737 Eucalyptus grandis HOM05D000987 ORTHO05D000831 3.7e-07 58.5 70 42.9
Glyma.05G190200 Glycine max HOM05D000987 ORTHO05D000831 3.7e-07 58.5 61 44.3
MD10G1015900 Malus domestica HOM05D000987 ORTHO05D000831 3.7e-07 58.5 61 50.8
vmacro12860 Vaccinium macrocarpon HOM05D000987 ORTHO05D000831 3.7e-07 58.5 66 43.9
Sopen11g001720 Solanum pennellii HOM05D000987 ORTHO05D000831 4.9e-07 58.2 64 50.0
Nitab4.5_0003093g0030 Nicotiana tabacum HOM05D000987 ORTHO05D000831 6.4e-07 57.8 55 54.5
Prupe.8G019600 Prunus persica HOM05D000987 ORTHO05D000831 1.1e-06 57.0 59 54.2
MSTRG.3604 Avicennia marina HOM05D000987 ORTHO05D000831 1.4e-06 56.6 55 49.1
Aqoxy6G00270 Aquilegia oxysepala HOM05D000987 ORTHO05D000831 2.4e-06 55.8 58 50.0
Glyma.14G122600 Glycine max HOM05D000987 ORTHO05D000831 2.4e-06 55.8 62 53.2
Ca_12661_v3 Cicer arietinum L. HOM05D000987 ORTHO05D000831 5.4e-06 54.7 62 51.6
FAN19G0679 Fragaria x ananassa HOM05D000987 ORTHO05D000831 7.1e-06 54.3 57 45.6
Actinidia01138 Actinidia chinensis HOM05D000987 ORTHO05D000831 9.2e-06 53.9 60 51.7
FAN26G0395 Fragaria x ananassa HOM05D000987 ORTHO05D000831 9.2e-06 53.9 57 47.4
Nitab4.5_0000299g0120 Nicotiana tabacum HOM05D000987 ORTHO05D000831 9.2e-06 53.9 62 46.8


User provided reference genes

Program Settings