Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc3.209 Carica papaya HOM05D007277 ORTHO05D006336 6.0e-118 427.6 220 100.0
Cpa.g.sc3.199 Carica papaya HOM05D007277 ORTHO05D006336 8.7e-85 317.4 174 96.0
Cpa.g.sc3.210 Carica papaya HOM05D007277 ORTHO05D006336 1.4e-61 240.4 167 77.8
Cpa.g.sc3.198 Carica papaya HOM05D007277 ORTHO05D006336 1.3e-59 233.8 167 76.0
Thecc.03G110900 Theobroma cacao HOM05D007277 ORTHO05D006336 3.7e-19 99.4 120 52.5
COL.COLO4_28831 Corchorus olitorius HOM05D007277 ORTHO05D006336 1.2e-17 94.4 128 49.2
QL07p042928 Quercus lobata HOM05D007277 ORTHO05D006336 1.0e-16 91.3 91 56.0
QL07p042995 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-16 90.9 90 56.7
Thecc.03G111200 Theobroma cacao HOM05D007277 ORTHO05D006336 2.3e-16 90.1 116 49.1
QL07p042903 Quercus lobata HOM05D007277 ORTHO05D006336 3.0e-16 89.7 163 41.1
Gohir.D07G062800 Gossypium hirsutum HOM05D007277 ORTHO05D006336 5.6e-15 85.5 116 44.8
Gohir.A07G058000 Gossypium hirsutum HOM05D007277 ORTHO05D006336 7.3e-15 85.1 116 47.4
QL07p042879 Quercus lobata HOM05D007277 ORTHO05D006336 6.8e-13 78.6 94 47.9
QL10p012835 Quercus lobata HOM05D007277 ORTHO05D006336 8.9e-13 78.2 117 41.0
Ciclev10024167m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.5e-12 77.4 117 42.7
Gorai.001G066300 Gossypium raimondii HOM05D007277 ORTHO05D006336 2.6e-12 76.6 118 44.1
Cfa002615 Carpinus fangiana HOM05D007277 ORTHO05D006336 3.4e-12 76.3 88 48.9
Ciclev10029817m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.4e-12 76.3 119 42.0
Ciclev10023596m.g Citrus clementina HOM05D010635 ORTHO05D006336 4.4e-12 75.9 125 38.4
FAN18G2501 Fragaria x ananassa HOM05D007277 ORTHO05D006336 9.8e-12 74.7 111 44.1
Ciclev10024327m.g Citrus clementina HOM05D007277 ORTHO05D006336 1.3e-11 74.3 99 44.4
FAN18G2870 Fragaria x ananassa HOM05D000423 ORTHO05D000284 1.3e-11 74.3 111 43.2
QL02p080510 Quercus lobata HOM05D007277 ORTHO05D006336 1.3e-11 74.3 89 49.4
Haze_24862 Corylus avellana HOM05D007277 ORTHO05D006336 2.9e-11 73.2 95 46.3
Ciclev10023402m.g Citrus clementina HOM05D007277 ORTHO05D006336 3.7e-11 72.8 113 42.5
FvH4_5g13170 Fragaria vesca HOM05D007277 ORTHO05D006336 4.9e-11 72.4 111 42.3
FvH4_5g13230 Fragaria vesca HOM05D007277 ORTHO05D006336 1.1e-10 71.2 111 43.2
FAN08G1790 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.4e-10 70.1 92 47.8
QL10p051898 Quercus lobata HOM05D007277 ORTHO05D006336 2.4e-10 70.1 90 44.4
FvH4_5g13221 Fragaria vesca HOM05D007277 ORTHO05D006336 3.2e-10 69.7 86 47.7
Actinidia10434 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.1e-10 69.3 101 46.5
Cfa002614 Carpinus fangiana HOM05D007277 ORTHO05D006336 4.1e-10 69.3 85 47.1
FvH4_5g13140 Fragaria vesca HOM05D007277 ORTHO05D006336 4.1e-10 69.3 111 41.4
FAN18G0686 Fragaria x ananassa HOM05D007277 ORTHO05D006336 4.1e-10 69.3 119 40.3
QL07p042983 Quercus lobata HOM05D007277 ORTHO05D006336 4.1e-10 69.3 92 47.8
FvH4_5g13130 Fragaria vesca HOM05D007277 ORTHO05D006336 5.4e-10 68.9 119 40.3
FAN18G3246 Fragaria x ananassa HOM05D007277 ORTHO05D006336 5.4e-10 68.9 111 41.4
QL02p080387 Quercus lobata HOM05D007277 ORTHO05D006336 7.0e-10 68.6 89 46.1
Atru.chr9.2085 Acer truncatum HOM05D007277 ORTHO05D006336 1.2e-09 67.8 90 44.4
QL09p028728 Quercus lobata HOM05D007277 ORTHO05D006336 1.2e-09 67.8 88 45.5
Rhsim12G0165400 Rhododendron simsii HOM05D007277 ORTHO05D006336 1.2e-09 67.8 89 47.2
QL07p042874 Quercus lobata HOM05D007277 ORTHO05D006336 2.0e-09 67.0 94 43.6
Solyc03g114650.3 Solanum lycopersicum HOM05D007277 ORTHO05D006336 2.0e-09 67.0 122 37.7
Sopen03g033720 Solanum pennellii HOM05D007277 ORTHO05D006336 2.0e-09 67.0 141 34.0
FAN08G1781 Fragaria x ananassa HOM05D007277 ORTHO05D006336 2.7e-09 66.6 85 47.1
Prupe.6G011800 Prunus persica HOM05D007277 ORTHO05D006336 2.7e-09 66.6 129 36.4
Dinv36831 Davidia involucrata HOM05D007277 ORTHO05D006336 3.5e-09 66.2 85 49.4
FvH4_5g13190 Fragaria vesca HOM05D007277 ORTHO05D013598 3.5e-09 66.2 82 47.6
Atru.chr4.1305 Acer truncatum HOM05D010298 ORTHO05D006336 4.6e-09 65.9 127 38.6
Haze_24866 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-09 65.9 88 44.3
Haze_27687 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-09 65.9 113 38.9
Haze_27688 Corylus avellana HOM05D007277 ORTHO05D006336 4.6e-09 65.9 113 38.9
Dinv38624 Davidia involucrata HOM05D007277 ORTHO05D006336 7.8e-09 65.1 89 46.1
FAN13G2869 Fragaria x ananassa HOM05D007277 ORTHO05D006336 1.0e-08 64.7 94 41.5
PGSC0003DMG400024676 Solanum tuberosum HOM05D007277 ORTHO05D006336 1.3e-08 64.3 160 34.4
PGSC0003DMG400024518 Solanum tuberosum HOM05D007277 ORTHO05D006336 3.0e-08 63.2 183 29.5
CSS0000915 Camellia sinensis var. sinensis HOM05D007277 ORTHO05D006336 3.9e-08 62.8 89 40.4
DCAR_010189 Daucus carota HOM05D007277 ORTHO05D006336 3.9e-08 62.8 105 41.9
Prupe.1G109400 Prunus persica HOM05D007277 ORTHO05D006336 3.9e-08 62.8 91 41.8
MD03G1009100 Malus domestica HOM05D007277 ORTHO05D006336 5.0e-08 62.4 125 37.6
QL07p042908 Quercus lobata HOM05D007277 ORTHO05D006336 5.0e-08 62.4 91 45.1
Atru.chr4.1303 Acer truncatum HOM05D010298 ORTHO05D012539 1.1e-07 61.2 160 33.8
Actinidia24268 Actinidia chinensis HOM05D007277 ORTHO05D006336 1.1e-07 61.2 89 38.2
FvH4_5g13220 Fragaria vesca HOM05D007277 ORTHO05D006336 1.1e-07 61.2 96 44.8
Manes.05G115300 Manihot esculenta HOM05D007277 ORTHO05D006336 1.1e-07 61.2 95 45.3
Cfa021203 Carpinus fangiana HOM05D007277 ORTHO05D006336 2.5e-07 60.1 91 41.8
FAN08G3205 Fragaria x ananassa HOM05D007277 ORTHO05D006336 3.3e-07 59.7 83 43.4
Ciclev10023444m.g Citrus clementina HOM05D007277 ORTHO05D006336 5.6e-07 58.9 115 36.5
MD14G1141800 Malus domestica HOM05D007277 ORTHO05D006336 5.6e-07 58.9 90 41.1
Actinidia24271 Actinidia chinensis HOM05D007277 ORTHO05D006336 7.3e-07 58.5 90 36.7
Prupe.6G011200 Prunus persica HOM05D007277 ORTHO05D006336 7.3e-07 58.5 94 38.3
RcHm_v2.0_Chr7g0240781 Rosa chinensis HOM05D007277 ORTHO05D006336 7.3e-07 58.5 109 40.4
MD03G1010100 Malus domestica HOM05D007277 ORTHO05D006336 9.5e-07 58.2 154 31.8
RcHm_v2.0_Chr7g0241491 Rosa chinensis HOM05D007277 ORTHO05D006336 1.2e-06 57.8 101 39.6
MD03G1011400 Malus domestica HOM05D007277 ORTHO05D006336 1.6e-06 57.4 90 36.7
Potri.007G133200 Populus trichocarpa HOM05D010635 ORTHO05D006336 1.6e-06 57.4 82 36.6
MD11G1013400 Malus domestica HOM05D007277 ORTHO05D006336 2.1e-06 57.0 107 36.4
TAR636G2604 Trochodendron aralioides HOM05D012741 ORTHO05D006336 2.8e-06 56.6 122 36.1
QL11p034196 Quercus lobata HOM05D007277 ORTHO05D006336 3.6e-06 56.2 83 43.4
Actinidia22592 Actinidia chinensis HOM05D007277 ORTHO05D006336 4.7e-06 55.8 89 37.1


User provided reference genes

Program Settings