Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc27.192 Carica papaya HOM05D009991 ORTHO05D011409 1.6e-88 329.3 156 100.0
CiPaw.09G112400 Carya illinoinensis HOM05D009991 ORTHO05D011409 2.6e-19 99.4 156 41.7
TAR629G3136 Trochodendron aralioides HOM05D009991 ORTHO05D011409 4.2e-17 92.0 157 40.1
Cfa000004 Carpinus fangiana HOM05D009991 ORTHO05D011409 1.8e-15 86.7 164 38.4
Nn1g07681 Nelumbo nucifera HOM05D021029 ORTHO05D011409 1.5e-14 83.6 111 38.7
CANSAT56G4091 Cannabis sativa HOM05D009991 ORTHO05D011409 7.4e-14 81.3 170 33.5
QL05p066356 Quercus lobata HOM05D009991 ORTHO05D011409 9.7e-14 80.9 165 38.8
Manes.09G072700 Manihot esculenta HOM05D009991 ORTHO05D011409 1.7e-13 80.1 115 46.1
CiPaw.10G084400 Carya illinoinensis HOM05D009991 ORTHO05D011409 1.6e-11 73.6 164 35.4
Atru.chr1.2234 Acer truncatum HOM05D009991 ORTHO05D011409 3.5e-11 72.4 108 38.0
VMungo0540G1391 Vigna mungo HOM05D009991 ORTHO05D011409 7.7e-11 71.2 160 33.1
THA.LOC104821643 Tarenaya hassleriana HOM05D010775 ORTHO05D014755 1.7e-10 70.1 100 35.0
Lj4g0010151 Lotus japonicus HOM05D009991 ORTHO05D011409 2.9e-10 69.3 142 34.5
ClCG01G021060 Citrullus lanatus HOM05D021029 ORTHO05D011409 5.0e-10 68.6 104 38.5
TWI63G0729 Tripterygium wilfordii HOM05D009991 ORTHO05D011409 8.5e-10 67.8 166 36.7
Thecc.06G243600 Theobroma cacao HOM05D009991 ORTHO05D011409 9.4e-09 64.3 158 35.4
CSS0025740 Camellia sinensis var. sinensis HOM05D026581 ORTHO05D015213 1.2e-08 63.9 158 36.1
MD10G1341800 Malus domestica HOM05D026675 ORTHO05D011409 1.6e-08 63.5 200 31.0
Phvul.003G089000 Phaseolus vulgaris HOM05D009991 ORTHO05D011409 1.6e-08 63.5 167 33.5
Phvul.006G135200 Phaseolus vulgaris HOM05D009991 ORTHO05D011409 2.1e-08 63.2 166 35.5
Glyma.17G004050 Glycine max HOM05D000015 ORTHO05D000984 3.6e-08 62.4 157 34.4
MELO3C007992.2 Cucumis melo HOM05D021029 ORTHO05D011409 4.7e-08 62.0 104 32.7
Prupe.4G001400 Prunus persica HOM05D026675 ORTHO05D011409 4.7e-08 62.0 202 33.2
Sed0015901 Sechium edule HOM05D021029 ORTHO05D011409 1.0e-07 60.8 98 38.8
Glyma.09G016900 Glycine max HOM05D009991 ORTHO05D011409 3.0e-07 59.3 168 33.9
Oeu002785.2 Olea europaea HOM05D000064 ORTHO05D290147 3.0e-07 59.3 158 31.6
Glyma.15G122500 Glycine max HOM05D009991 ORTHO05D011409 4.0e-07 58.9 159 33.3
Lj6g0001356 Lotus japonicus HOM05D009991 ORTHO05D011409 8.8e-07 57.8 167 32.9
Sabra16G0007200 Salix brachista HOM05D047584 ORTHO05D050545 2.6e-06 56.2 156 37.2
arahy.Tifrunner.gnm1.ann1.LL1TW1 Arachis hypogaea HOM05D009991 ORTHO05D011409 9.7e-06 54.3 104 32.7


User provided reference genes

Program Settings