Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 8.3e-67 256.9 131 100.0
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 2.4e-45 185.7 129 75.2
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 5.2e-45 184.5 104 88.5
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 8.9e-45 183.7 104 87.5
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 1.5e-44 183.0 104 87.5
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 4.4e-44 181.4 110 83.6
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 7.6e-44 180.6 104 86.5
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 7.6e-44 180.6 104 86.5
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 1.7e-43 179.5 104 86.5
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 2.9e-43 178.7 104 86.5
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 2.9e-43 178.7 104 86.5
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 2.9e-43 178.7 124 75.0
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 3.8e-43 178.3 119 76.5
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 8.4e-43 177.2 104 84.6
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 8.4e-43 177.2 104 85.6
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.1e-42 176.8 104 85.6
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 1.1e-42 176.8 104 84.6
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 3.2e-42 175.3 104 86.5
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 4.2e-42 174.9 104 82.7
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 5.4e-42 174.5 104 83.7
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 7.1e-42 174.1 124 73.4
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.2e-41 173.3 104 83.7
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.2e-41 173.3 104 83.7
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 1.2e-41 173.3 104 82.7
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.7e-41 172.2 104 81.7
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 4.6e-41 171.4 104 80.8
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 4.6e-41 171.4 104 83.7
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 7.8e-41 170.6 126 69.8
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 1.0e-40 170.2 103 83.5
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 1.3e-40 169.9 104 83.7
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 1.7e-40 169.5 104 78.8
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 1.7e-40 169.5 104 81.7
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 2.3e-40 169.1 104 81.7
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 3.0e-40 168.7 104 81.7
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 6.6e-40 167.5 105 81.0
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 2.5e-39 165.6 104 80.8
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 2.5e-39 165.6 104 81.7
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 5.6e-39 164.5 104 79.8
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 5.6e-39 164.5 124 67.7
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 7.3e-39 164.1 112 71.4
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 9.6e-39 163.7 104 82.7
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 9.6e-39 163.7 104 82.7
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 1.3e-38 163.3 104 79.8
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 1.6e-38 162.9 104 80.8
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 2.1e-38 162.5 97 81.4
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 2.8e-38 162.2 104 78.8
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 4.8e-38 161.4 104 79.8
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 8.1e-38 160.6 104 77.9
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 8.1e-38 160.6 124 69.4
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 8.1e-38 160.6 104 77.9
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 8.1e-38 160.6 104 77.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 8.1e-38 160.6 124 69.4
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 8.1e-38 160.6 105 80.0
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 1.4e-37 159.8 104 76.9
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 1.8e-37 159.5 104 77.9
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 1.8e-37 159.5 104 76.0
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 3.1e-37 158.7 104 80.8
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 4.0e-37 158.3 104 75.0
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 4.0e-37 158.3 104 75.0
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 4.0e-37 158.3 124 68.5
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 5.3e-37 157.9 104 76.9
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 5.3e-37 157.9 104 79.8
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 5.3e-37 157.9 104 77.9
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 5.3e-37 157.9 104 77.9
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 9.0e-37 157.1 104 76.9
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 4.4e-36 154.8 104 74.0
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 7.6e-36 154.1 104 77.9
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 7.6e-36 154.1 112 69.6
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 9.9e-36 153.7 102 75.5
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 1.7e-35 152.9 104 76.0
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 8.4e-35 150.6 102 74.5
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 1.1e-34 150.2 102 75.5
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 1.4e-34 149.8 104 75.0
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 4.2e-34 148.3 122 67.2
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 5.4e-34 147.9 104 71.2
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 9.3e-34 147.1 101 73.3
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.2e-33 146.7 105 72.4
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 2.1e-33 146.0 128 64.8
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 2.7e-33 145.6 104 73.1
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 4.6e-33 144.8 102 74.5
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.6e-33 144.8 102 74.5
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 4.6e-33 144.8 102 74.5
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 4.6e-33 144.8 80 90.0
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 4.6e-33 144.8 83 88.0
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 7.9e-33 144.1 104 74.0
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.0e-32 143.7 102 72.5
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 1.0e-32 143.7 102 72.5
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 1.0e-32 143.7 104 76.0
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.3e-32 143.3 102 73.5
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.3e-32 142.5 104 72.1
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 3.9e-32 141.7 102 73.5
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 1.1e-31 140.2 104 70.2
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 1.1e-31 140.2 127 61.4
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 4.3e-31 138.3 86 79.1
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 4.3e-31 138.3 104 69.2
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 5.6e-31 137.9 104 70.2
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 1.3e-30 136.7 104 67.3
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 8.1e-30 134.0 82 79.3
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 8.1e-30 134.0 124 62.1
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 1.4e-29 133.3 104 67.3
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 9.0e-29 130.6 119 57.1
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 9.9e-28 127.1 121 57.0
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 3.5e-25 118.6 129 51.2
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 1.9e-23 112.8 128 50.8
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 2.5e-23 112.5 64 85.9
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 3.3e-23 112.1 88 68.2
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 4.3e-23 111.7 129 48.8
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 1.0e-19 100.5 129 47.3
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 6.0e-17 91.3 88 59.1
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 7.9e-17 90.9 52 86.5
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 6.7e-16 87.8 107 43.9
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 1.1e-15 87.0 63 66.7
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 4.3e-15 85.1 86 57.0
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.4e-12 75.5 39 92.3
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 3.4e-12 75.5 39 92.3
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 1.0e-11 73.9 95 42.1
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 8.4e-11 70.9 109 44.0
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 4.2e-10 68.6 55 65.5


User provided reference genes

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