Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 1.2e-39 166.0 79 100.0
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 2.4e-24 115.2 55 92.7
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 3.1e-24 114.8 60 85.0
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 3.1e-24 114.8 57 89.5
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 3.1e-24 114.8 57 89.5
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 3.1e-24 114.8 57 89.5
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 6.9e-24 113.6 57 87.7
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 6.9e-24 113.6 57 86.0
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 9.0e-24 113.2 57 86.0
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 9.0e-24 113.2 57 87.7
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 9.0e-24 113.2 57 86.0
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 9.0e-24 113.2 57 86.0
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 87.7
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 1.2e-23 112.8 57 89.5
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 1.5e-23 112.5 57 87.7
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.5e-23 112.5 57 87.7
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 2.0e-23 112.1 57 87.7
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 2.0e-23 112.1 57 87.7
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.0e-23 112.1 57 87.7
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 2.0e-23 112.1 57 86.0
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 87.7
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 84.2
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 2.6e-23 111.7 57 86.0
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 87.7
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 86.0
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 86.0
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 3.4e-23 111.3 57 86.0
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 87.7
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 87.7
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 87.7
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 3.4e-23 111.3 57 84.2
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.4e-23 110.9 57 86.0
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 4.4e-23 110.9 55 89.1
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 4.4e-23 110.9 57 86.0
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 4.4e-23 110.9 57 86.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.4e-23 110.9 57 84.2
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 4.4e-23 110.9 57 87.7
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 86.0
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 86.0
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 87.7
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 86.0
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 86.0
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 5.8e-23 110.5 57 86.0
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 84.2
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 82.5
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 84.2
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 80.7
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 84.2
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 84.2
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 7.6e-23 110.2 57 86.0
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 86.0
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 86.0
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 84.2
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 84.2
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 84.2
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 86.0
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 9.9e-23 109.8 57 84.2
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 1.3e-22 109.4 57 84.2
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 1.3e-22 109.4 57 86.0
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.3e-22 109.4 57 84.2
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 1.3e-22 109.4 57 84.2
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 1.7e-22 109.0 55 87.3
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 1.7e-22 109.0 57 84.2
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 2.2e-22 108.6 56 85.7
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 2.2e-22 108.6 57 84.2
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 2.2e-22 108.6 57 84.2
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.2e-22 108.6 57 84.2
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.2e-22 108.6 57 84.2
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 2.2e-22 108.6 55 89.1
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 2.9e-22 108.2 57 84.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 2.9e-22 108.2 57 82.5
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 80.7
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 80.7
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 82.5
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 82.5
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 82.5
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 3.8e-22 107.8 57 80.7
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 4.9e-22 107.5 57 82.5
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 4.9e-22 107.5 57 80.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.9e-22 107.5 57 82.5
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 4.9e-22 107.5 59 79.7
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 6.4e-22 107.1 57 80.7
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 1.1e-21 106.3 57 82.5
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 1.4e-21 105.9 57 82.5
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 1.9e-21 105.5 57 80.7
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.9e-21 105.5 57 80.7
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 1.9e-21 105.5 57 80.7
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 2.4e-21 105.1 57 82.5
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 4.2e-21 104.4 57 78.9
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 7.1e-21 103.6 57 80.7
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.6e-20 102.4 57 78.9
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 2.7e-20 101.7 66 74.2
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 2.7e-20 101.7 57 80.7
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 2.7e-20 101.7 73 68.5
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 4.6e-20 100.9 59 76.3
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 6.0e-20 100.5 54 87.0
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 7.8e-20 100.1 74 66.2
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 1.7e-19 99.0 57 75.4
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.3e-19 98.6 59 74.6
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 1.5e-18 95.9 49 85.7
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 5.6e-18 94.0 54 74.1
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 1.3e-17 92.8 53 75.5
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 8.1e-17 90.1 54 72.2
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 1.4e-16 89.4 45 82.2
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.4e-13 79.3 58 67.2
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 2.4e-13 78.6 58 65.5
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 4.3e-10 67.8 69 47.8
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.9e-06 55.1 26 88.5


User provided reference genes

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