Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.222 Carica papaya HOM05D001082 ORTHO05D005120 2.0e-244 848.6 414 100.0
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 3.9e-86 322.8 279 57.7
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 5.3e-83 312.4 269 59.1
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.5e-82 310.8 274 56.2
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 1.5e-82 310.8 274 55.5
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 1.9e-80 303.9 274 55.5
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 1.2e-79 301.2 275 53.8
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 6.0e-79 298.9 277 54.9
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 2.3e-78 297.0 262 55.0
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 3.0e-78 296.6 278 52.5
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 3.3e-77 293.1 276 55.8
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 7.4e-77 292.0 275 54.5
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 2.1e-76 290.4 269 53.9
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 2.1e-76 290.4 269 53.9
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 2.8e-76 290.0 266 54.9
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 8.1e-76 288.5 275 54.2
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 3.1e-75 286.6 276 54.3
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 3.1e-75 286.6 277 51.3
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 6.9e-75 285.4 277 51.3
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 2.0e-74 283.9 277 52.7
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 2.0e-74 283.9 292 50.7
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 5.8e-74 282.3 278 52.2
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 1.7e-73 280.8 278 52.2
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 3.8e-73 279.6 277 50.9
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 4.9e-73 279.3 262 55.7
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 1.1e-72 278.1 270 52.2
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 1.1e-72 278.1 275 50.5
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 5.5e-72 275.8 276 53.6
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 2.1e-71 273.9 286 53.5
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.8e-70 270.8 268 47.8
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 3.0e-70 270.0 279 52.3
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 6.7e-70 268.9 272 49.6
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.9e-69 267.3 268 47.0
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 3.3e-69 266.5 272 49.6
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 7.4e-69 265.4 278 47.8
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.6e-68 264.2 275 48.0
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 3.7e-68 263.1 272 49.6
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 8.2e-68 261.9 275 52.7
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 8.2e-68 261.9 274 51.1
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 4.1e-67 259.6 269 53.2
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 5.3e-67 259.2 300 49.3
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 6.9e-67 258.8 331 40.2
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 6.9e-67 258.8 273 53.1
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 1.5e-66 257.7 266 54.1
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 2.0e-66 257.3 261 49.0
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 2.6e-66 256.9 268 48.9
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 3.4e-66 256.5 284 50.0
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 1.0e-65 255.0 272 47.4
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 1.3e-65 254.6 275 50.5
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 1.7e-65 254.2 270 49.3
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 2.2e-65 253.8 286 50.7
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 2.9e-65 253.4 283 50.5
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 3.8e-65 253.1 276 49.3
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 6.5e-65 252.3 271 49.4
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 1.1e-64 251.5 302 43.7
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 1.1e-64 251.5 279 51.6
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 1.9e-64 250.8 267 48.3
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 5.5e-64 249.2 225 56.0
Solyc01g102550.4 Solanum lycopersicum HOM05D001082 ORTHO05D005120 7.2e-64 248.8 276 49.3
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 1.2e-63 248.1 289 41.9
CDE01G0761 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 1.6e-63 247.7 276 46.7
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 4.6e-63 246.1 276 48.9
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 7.9e-63 245.4 330 45.2
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 3.0e-62 243.4 280 45.4
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 1.5e-61 241.1 276 48.6
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 2.5e-61 240.4 275 45.5
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 5.7e-61 239.2 273 48.4
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 2.2e-60 237.3 273 48.0
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 2.2e-60 237.3 221 52.9
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 4.8e-60 236.1 283 46.6
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 6.3e-60 235.7 252 48.4
TAR339G0004 Trochodendron aralioides HOM05D001082 ORTHO05D005120 6.3e-60 235.7 248 52.0
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 8.2e-60 235.3 275 48.0
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.7e-57 227.6 267 46.4
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 1.7e-57 227.6 279 42.3
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 2.2e-57 227.3 275 45.1
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 6.5e-57 225.7 279 46.2
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 6.5e-57 225.7 259 47.1
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 6.5e-57 225.7 257 46.3
ClCG06G008340 Citrullus lanatus HOM05D001082 ORTHO05D005120 3.6e-55 219.9 380 35.5
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 5.1e-54 216.1 270 45.9
MD05G1161300 Malus domestica HOM05D001082 ORTHO05D005120 3.3e-53 213.4 279 47.7
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 5.7e-53 212.6 279 45.2
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 5.7e-53 212.6 279 45.2
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 3.7e-52 209.9 255 44.3
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 1.4e-51 208.0 279 46.2
ECA233G1393 Erigeron canadensis HOM05D001082 ORTHO05D005120 6.9e-51 205.7 321 37.7
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 9.1e-51 205.3 281 45.6
CAN.G1379.29 Capsicum annuum HOM05D001082 ORTHO05D005120 2.0e-50 204.1 234 47.4
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 3.4e-50 203.4 278 45.0
SEGI_00916 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 4.5e-50 203.0 273 42.5
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 2.1e-47 194.1 220 46.8
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 2.1e-47 194.1 209 49.8
Oeu010603.1 Olea europaea HOM05D001082 ORTHO05D005120 2.6e-42 177.2 368 34.2
BolC4t27268H Brassica oleracea HOM05D001082 ORTHO05D005120 1.4e-38 164.9 279 42.7
SEGI_20053 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 2.3e-38 164.1 217 42.4
Atru.chr12.2421 Acer truncatum HOM05D001082 ORTHO05D005120 4.4e-37 159.8 127 62.2
BcaC02g08190 Brassica carinata HOM05D001082 ORTHO05D005120 1.1e-35 155.2 280 41.1
C04p57470 Brassica napus HOM05D001082 ORTHO05D005120 7.0e-35 152.5 280 40.4
SHI21155 Sapria himalayana HOM05D001082 ORTHO05D005120 2.0e-34 151.0 217 41.0
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 1.0e-33 148.7 271 36.9
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 1.2e-29 135.2 270 34.8
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 9.5e-24 115.5 275 30.2
SMO239G0052 Selaginella moellendorffii HOM05D001082 ORTHO05D005120 6.1e-15 86.3 144 36.8
CBR_g55210 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-14 85.1 214 31.8
unitig_22.g5790 Utricularia gibba HOM05D001082 ORTHO05D005120 5.4e-11 73.2 117 37.6
C04p58080 Brassica napus HOM05D001082 ORTHO05D005120 2.0e-10 71.2 130 33.8
BcaC02g08127 Brassica carinata HOM05D001082 ORTHO05D005120 1.0e-09 68.9 109 35.8
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 2.3e-09 67.8 59 50.8
BolC4t27334H Brassica oleracea HOM05D001082 ORTHO05D005120 1.5e-08 65.1 109 34.9
BcaB06g28204 Brassica carinata HOM05D001082 ORTHO05D005120 2.5e-08 64.3 140 36.4


User provided reference genes

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