Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc19.22 Carica papaya HOM05D022488 ORTHO05D000004 1.1e-97 359.8 164 100.0
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-12 74.3 161 33.5
CSS0010918 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-11 73.6 171 29.2
CSS0009894 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-11 72.8 125 36.0
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 8.1e-11 71.2 173 31.8
Atru.chr11.133 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-10 70.1 141 30.5
QL10p019533 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-10 70.1 127 32.3
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-10 69.7 125 32.0
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.1e-10 69.3 126 32.5
Atru.chr1.3579 Acer truncatum HOM05D000003 ORTHO05D000004 5.2e-10 68.6 154 31.2
Aqoxy1G03268 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.9e-10 68.2 156 31.4
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-10 67.8 108 35.2
Oeu016388.3 Olea europaea HOM05D000147 ORTHO05D005311 1.2e-09 67.4 127 31.5
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 1.2e-09 67.4 163 29.4
MBI18_g01966_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.5e-09 67.0 161 28.6
Atru.chr1.3207 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-09 66.6 139 33.8
Atru.chr8.2073 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-09 66.6 120 34.2
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 2.0e-09 66.6 183 27.3
Atru.chr4.2622 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-09 66.2 162 29.0
CSS0003011 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-09 66.2 97 39.2
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 3.4e-09 65.9 157 31.2
Atru.chr6.1410 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-09 65.5 150 31.3
PGSC0003DMG400028654 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.4e-09 65.5 121 33.1
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 5.8e-09 65.1 150 30.7
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.6e-09 64.7 108 33.3
CSS0047240 Camellia sinensis var. sinensis HOM05D021121 ORTHO05D000004 7.6e-09 64.7 94 35.1
Oeu006782.2 Olea europaea HOM05D000688 ORTHO05D003888 7.6e-09 64.7 124 28.2
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.9e-09 64.3 108 33.3
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-08 63.9 152 30.3
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-08 63.5 165 29.1
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-08 63.5 102 36.3
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-08 63.5 101 34.7
Atru.chr4.1942 Acer truncatum HOM05D000003 ORTHO05D000004 2.9e-08 62.8 112 32.1
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.9e-08 62.8 127 31.5
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 4.9e-08 62.0 123 30.9
Atru.chr10.949 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-08 61.6 151 32.5
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-08 61.6 150 30.7
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 6.4e-08 61.6 123 30.9
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 6.4e-08 61.6 123 30.9
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 6.4e-08 61.6 123 30.9
Atru.chr2.1226 Acer truncatum HOM05D000003 ORTHO05D000004 8.4e-08 61.2 113 34.5
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.4e-08 61.2 134 28.4
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 8.4e-08 61.2 122 31.1
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-07 60.8 109 34.9
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-07 60.8 123 30.9
Sed0015894 Sechium edule HOM05D000003 ORTHO05D000004 1.1e-07 60.8 113 31.9
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 1.4e-07 60.5 111 31.5
PSO151G0217 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 115 32.2
PSO675G0741 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 60.5 114 29.8
SHI09341 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-07 60.5 123 30.1
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.9e-07 60.1 123 27.6
Oeu002500.1 Olea europaea HOM05D000003 ORTHO05D000004 1.9e-07 60.1 122 28.7
Oeu024647.1 Olea europaea HOM05D000003 ORTHO05D000004 1.9e-07 60.1 165 27.9
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 1.9e-07 60.1 123 30.1
Aqoxy6G01480 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-07 59.7 121 28.9
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-07 59.7 106 33.0
Atru.chr3.2347 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-07 59.3 107 32.7
Atru.chr6.510 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-07 59.3 120 32.5
CSS0009846 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-07 59.3 129 30.2
Atru.chr10.984 Acer truncatum HOM05D000502 ORTHO05D002259 4.2e-07 58.9 150 28.7
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-07 58.9 146 30.1
Atru.chr8.612 Acer truncatum HOM05D000003 ORTHO05D000004 4.2e-07 58.9 138 31.9
CSS0013913 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.2e-07 58.9 134 28.4
Cpa.g.sc167.4 Carica papaya HOM05D022488 ORTHO05D118824 4.2e-07 58.9 55 52.7
Cpa.g.sc31.42 Carica papaya HOM05D022488 ORTHO05D117407 4.2e-07 58.9 102 34.3
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 4.2e-07 58.9 153 28.1
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 4.2e-07 58.9 123 30.1
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 5.4e-07 58.5 154 27.9
Atru.chr10.514 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-07 58.2 134 32.8
Atru.chr12.1368 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-07 58.2 140 28.6
Atru.chr4.1654 Acer truncatum HOM05D000003 ORTHO05D000004 7.1e-07 58.2 111 32.4
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.1e-07 58.2 125 28.0
Cpa.g.sc11.133 Carica papaya HOM05D000003 ORTHO05D000004 7.1e-07 58.2 47 51.1
Atru.chr2.2918 Acer truncatum HOM05D000003 ORTHO05D000004 9.3e-07 57.8 112 33.0
MBI09_g18615_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.3e-07 57.8 117 29.9
ClCG05G011400 Citrullus lanatus HOM05D000003 ORTHO05D000004 1.2e-06 57.4 108 33.3
Oeu052231.1 Olea europaea HOM05D000003 ORTHO05D000004 1.2e-06 57.4 115 27.8
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 1.6e-06 57.0 150 28.7
Atru.chr2.2564 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 133 30.1
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-06 56.6 128 27.3
arahy.Tifrunner.gnm1.ann1.YE229B Arachis hypogaea HOM05D000003 ORTHO05D000004 2.1e-06 56.6 108 31.5
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.1e-06 56.6 111 30.6
Cpa.g.sc83.23 Carica papaya HOM05D003998 ORTHO05D005144 2.1e-06 56.6 83 38.6
PSO151G0122 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 116 27.6
Aqoxy2G02028 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.7e-06 56.2 114 34.2
Sopen06g003000 Solanum pennellii HOM05D000200 ORTHO05D000262 2.7e-06 56.2 130 26.9
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 55.8 105 33.3
CiPaw.02G164600 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.6e-06 55.5 126 26.2
ClCG03G010470 Citrullus lanatus HOM05D000003 ORTHO05D000004 6.0e-06 55.1 133 27.1
HanXRQChr17g0536011 Helianthus annuus HOM05D000003 ORTHO05D000004 6.0e-06 55.1 127 28.3
QL02p038126 Quercus lobata HOM05D000003 ORTHO05D002480 6.0e-06 55.1 122 29.5


User provided reference genes

Program Settings