Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 3.3e-46 188.0 92 100.0
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 2.2e-34 148.7 78 89.7
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 1.1e-33 146.4 80 87.5
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.5e-33 146.0 88 80.7
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 1.9e-33 145.6 78 87.2
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 4.2e-33 144.4 78 88.5
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 5.5e-33 144.1 78 89.7
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 5.5e-33 144.1 78 87.2
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 5.5e-33 144.1 78 87.2
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 5.5e-33 144.1 78 87.2
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 9.4e-33 143.3 78 87.2
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 9.4e-33 143.3 76 88.2
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.4e-33 143.3 76 88.2
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 9.4e-33 143.3 78 87.2
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 87.2
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 87.2
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 87.2
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 87.2
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 87.2
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 1.2e-32 142.9 78 85.9
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.6e-32 142.5 78 87.2
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 1.6e-32 142.5 78 87.2
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 1.6e-32 142.5 86 80.2
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 1.6e-32 142.5 78 85.9
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 1.6e-32 142.5 86 79.1
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 2.1e-32 142.1 78 87.2
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.1e-32 142.1 78 85.9
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 2.1e-32 142.1 78 88.5
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 2.7e-32 141.7 89 77.5
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 3.6e-32 141.4 78 84.6
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 4.7e-32 141.0 78 84.6
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 4.7e-32 141.0 78 87.2
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 4.7e-32 141.0 78 87.2
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 6.1e-32 140.6 78 85.9
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 6.1e-32 140.6 78 84.6
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 8.0e-32 140.2 79 89.9
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 8.0e-32 140.2 76 86.8
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 8.0e-32 140.2 78 87.2
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 8.0e-32 140.2 78 87.2
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 1.0e-31 139.8 76 85.5
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.4e-31 139.4 78 84.6
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 1.4e-31 139.4 77 84.4
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.4e-31 139.4 78 85.9
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 1.8e-31 139.0 78 83.3
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 1.8e-31 139.0 86 79.1
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.8e-31 139.0 78 84.6
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 1.8e-31 139.0 78 85.9
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.8e-31 139.0 78 84.6
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 2.3e-31 138.7 78 84.6
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 2.3e-31 138.7 78 84.6
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.3e-31 138.7 78 83.3
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 2.3e-31 138.7 78 83.3
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 3.0e-31 138.3 78 83.3
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 3.0e-31 138.3 78 83.3
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 3.0e-31 138.3 78 84.6
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 3.0e-31 138.3 76 85.5
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 3.0e-31 138.3 78 84.6
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 3.0e-31 138.3 78 83.3
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 4.0e-31 137.9 86 76.7
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 4.0e-31 137.9 86 76.7
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 4.0e-31 137.9 76 85.5
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 4.0e-31 137.9 78 83.3
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 5.2e-31 137.5 78 82.1
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 5.2e-31 137.5 78 82.1
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 5.2e-31 137.5 78 80.8
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 5.2e-31 137.5 78 84.6
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 5.2e-31 137.5 86 77.9
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 5.2e-31 137.5 76 85.5
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 6.7e-31 137.1 78 80.8
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 6.7e-31 137.1 86 77.9
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 6.7e-31 137.1 78 82.1
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 6.7e-31 137.1 78 82.1
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 6.7e-31 137.1 78 83.3
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 6.7e-31 137.1 78 82.1
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 1.5e-30 136.0 86 77.9
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.5e-30 136.0 78 80.8
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 1.5e-30 136.0 78 82.1
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 1.5e-30 136.0 78 83.3
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.0e-30 135.6 89 75.3
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 2.0e-30 135.6 89 75.3
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 2.0e-30 135.6 78 82.1
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 2.0e-30 135.6 78 83.3
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 3.3e-30 134.8 78 79.5
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 5.7e-30 134.0 78 83.3
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 5.7e-30 134.0 78 83.3
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 7.5e-30 133.7 87 75.9
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 9.7e-30 133.3 78 80.8
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 1.7e-29 132.5 78 80.8
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.7e-29 132.5 78 80.8
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 1.7e-29 132.5 78 80.8
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 1.7e-29 132.5 78 80.8
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 1.7e-29 132.5 78 80.8
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 2.8e-29 131.7 78 82.1
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 6.3e-29 130.6 78 79.5
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 6.3e-29 130.6 78 79.5
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 6.3e-29 130.6 78 79.5
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 6.3e-29 130.6 76 82.9
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 1.1e-28 129.8 77 79.2
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 1.4e-28 129.4 78 79.5
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 1.8e-28 129.0 78 79.5
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.1e-28 127.9 78 79.5
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.0e-28 127.1 74 79.7
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.0e-28 127.1 74 79.7
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 2.0e-27 125.6 81 74.1
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.0e-26 123.2 91 68.1
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 2.9e-26 121.7 86 68.6
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 6.5e-26 120.6 78 73.1
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 3.2e-25 118.2 78 74.4
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 5.5e-25 117.5 84 70.2
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 7.2e-25 117.1 80 72.5
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 7.5e-22 107.1 58 84.5
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.8e-21 105.1 61 82.0
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 7.2e-17 90.5 80 57.5
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 9.5e-17 90.1 80 55.0
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 8.8e-15 83.6 80 53.8
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 2.2e-13 79.0 77 57.1
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 4.9e-13 77.8 55 67.3
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.4e-12 76.3 65 61.5
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 2.7e-11 72.0 47 68.1
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 4.5e-11 71.2 45 73.3
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 2.9e-10 68.6 86 47.7
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 6.6e-10 67.4 47 68.1
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 2.1e-08 62.4 77 48.1
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 2.3e-07 58.9 32 84.4
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 6.8e-07 57.4 32 81.2
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 3.4e-06 55.1 27 88.9


User provided reference genes

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