Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 4.0e-47 191.0 94 100.0
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 4.3e-41 171.0 94 88.3
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 2.8e-40 168.3 94 87.2
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.4e-39 166.0 94 84.0
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 1.4e-39 166.0 94 84.0
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 1.4e-39 166.0 94 84.0
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 4.0e-39 164.5 94 85.1
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 9.0e-39 163.3 88 88.6
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 9.0e-39 163.3 94 84.0
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.5e-38 162.5 90 84.4
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 2.0e-38 162.2 94 81.9
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 3.4e-38 161.4 94 83.0
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 4.5e-38 161.0 90 86.7
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 4.5e-38 161.0 94 78.7
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 7.6e-38 160.2 88 84.1
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 7.6e-38 160.2 90 83.3
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 7.6e-38 160.2 94 83.0
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 1.3e-37 159.5 94 83.0
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 1.7e-37 159.1 93 83.9
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 4.9e-37 157.5 88 85.2
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 6.4e-37 157.1 90 83.3
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 6.4e-37 157.1 94 79.8
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 6.4e-37 157.1 90 83.3
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.1e-36 156.4 94 80.9
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.4e-36 156.0 88 83.0
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 1.4e-36 156.0 93 81.7
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.4e-36 156.0 88 85.2
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.9e-36 155.6 88 81.8
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 2.4e-36 155.2 93 78.5
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 2.4e-36 155.2 90 80.0
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 2.4e-36 155.2 88 81.8
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 3.2e-36 154.8 94 77.7
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 4.2e-36 154.5 90 82.2
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 5.4e-36 154.1 88 81.8
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 5.4e-36 154.1 90 80.0
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.4e-36 154.1 90 80.0
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.4e-36 154.1 90 80.0
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 5.4e-36 154.1 82 87.8
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 5.4e-36 154.1 93 80.6
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 5.4e-36 154.1 90 80.0
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 7.1e-36 153.7 90 78.9
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 9.3e-36 153.3 90 80.0
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 9.3e-36 153.3 88 81.8
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.2e-35 152.9 90 78.9
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.2e-35 152.9 90 81.1
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 2.1e-35 152.1 90 80.0
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.7e-35 151.8 88 81.8
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 4.6e-35 151.0 90 78.9
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 7.9e-35 150.2 89 80.9
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 7.9e-35 150.2 90 76.7
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 7.9e-35 150.2 88 79.5
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 1.3e-34 149.4 94 77.7
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.3e-34 149.4 90 81.1
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 1.8e-34 149.1 89 78.7
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.8e-34 149.1 126 63.5
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 1.8e-34 149.1 94 74.5
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 2.3e-34 148.7 90 78.9
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 2.3e-34 148.7 94 74.5
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 2.3e-34 148.7 90 81.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.3e-34 148.7 88 79.5
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 3.0e-34 148.3 90 81.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 3.0e-34 148.3 88 79.5
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 78.9
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 78.9
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 78.9
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 78.9
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 78.9
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 6.7e-34 147.1 90 77.8
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 1.1e-33 146.4 90 80.0
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 1.1e-33 146.4 88 81.8
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 1.5e-33 146.0 88 77.3
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.9e-33 145.6 101 71.3
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 2.5e-33 145.2 90 78.9
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.5e-33 145.2 84 82.1
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 3.3e-33 144.8 88 77.3
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 4.3e-33 144.4 90 78.9
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.3e-33 144.4 88 79.5
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 4.3e-33 144.4 89 77.5
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 7.4e-33 143.7 86 77.9
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 9.6e-33 143.3 88 76.1
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 1.6e-32 142.5 86 77.9
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 1.6e-32 142.5 88 76.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.1e-32 140.2 102 67.6
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 9.9e-30 133.3 69 91.3
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 9.9e-30 133.3 77 77.9
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 4.9e-29 131.0 82 78.0
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 4.9e-29 131.0 82 78.0
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.6e-27 125.9 78 75.6
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.6e-27 124.4 74 77.0
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 7.9e-27 123.6 67 88.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 1.0e-26 123.2 68 85.3
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 3.0e-26 121.7 67 85.1
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 3.9e-26 121.3 71 77.5
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 5.1e-26 120.9 66 86.4
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.5e-25 119.4 69 75.4
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 5.6e-25 117.5 68 82.4
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 1.6e-24 115.9 67 77.6
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 1.1e-23 113.2 71 71.8
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 1.4e-23 112.8 79 64.6
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 2.4e-23 112.1 65 83.1
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 9.0e-23 110.2 67 73.1
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.5e-22 109.4 67 76.1
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 2.0e-22 109.0 65 75.4
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 7.1e-20 100.5 81 58.0
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.6e-19 99.4 75 60.0
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 1.9e-17 92.4 65 64.6
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 2.8e-16 88.6 67 67.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 1.4e-15 86.3 45 84.4
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.2e-14 83.2 90 52.2
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 6.1e-11 70.9 71 46.5
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 1.4e-10 69.7 70 48.6


User provided reference genes

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