Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 4.5e-239 830.9 423 100.0
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.3e-158 562.8 409 67.7
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 5.1e-158 561.6 405 69.1
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.3e-156 557.0 404 68.6
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 4.8e-156 555.1 418 66.0
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 8.1e-156 554.3 417 68.3
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 2.4e-155 552.7 414 66.4
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 2.4e-155 552.7 417 66.2
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 2.6e-154 549.3 415 67.7
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 9.9e-154 547.4 414 65.9
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.8e-153 545.4 404 67.1
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 7.1e-152 541.2 413 65.6
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 2.1e-151 539.7 405 65.2
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.5e-151 538.9 414 65.7
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 4.6e-151 538.5 432 64.1
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 4.6e-151 538.5 417 65.2
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 6.0e-151 538.1 403 67.0
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 7.9e-151 537.7 422 64.9
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.8e-150 536.6 403 64.5
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.0e-150 535.8 407 64.9
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 5.1e-150 535.0 412 65.8
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 6.7e-150 534.6 415 66.3
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 5.6e-149 531.6 403 66.7
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 5.6e-149 531.6 404 66.6
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 7.4e-149 531.2 408 65.4
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 9.6e-149 530.8 412 62.6
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 1.6e-148 530.0 421 63.9
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 3.4e-146 522.3 415 62.7
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 1.0e-145 520.8 408 63.2
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 1.3e-145 520.4 377 68.4
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.7e-145 520.0 403 65.3
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 2.9e-145 519.2 403 63.5
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 4.9e-145 518.5 404 64.1
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 6.5e-145 518.1 419 62.1
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 8.4e-145 517.7 409 63.1
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 1.1e-144 517.3 423 63.6
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.4e-144 516.9 419 62.1
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 7.1e-144 514.6 415 64.3
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 7.1e-144 514.6 403 65.3
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 1.6e-143 513.5 403 64.5
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 1.6e-143 513.5 403 64.5
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 2.1e-143 513.1 403 64.3
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 7.9e-143 511.1 404 65.1
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 1.0e-142 510.8 407 59.7
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.8e-142 510.0 402 63.9
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 1.8e-142 510.0 414 60.9
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 8.7e-142 507.7 406 61.1
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.5e-141 506.9 408 62.7
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 3.3e-141 505.8 407 60.7
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 4.3e-141 505.4 403 61.5
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 5.7e-141 505.0 420 59.8
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 5.7e-141 505.0 376 64.4
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 9.7e-141 504.2 414 61.8
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 3.7e-140 502.3 404 62.4
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 4.8e-140 501.9 405 63.0
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 4.8e-140 501.9 408 61.3
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 6.3e-140 501.5 404 63.6
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 1.4e-139 500.4 403 64.5
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 1.4e-139 500.4 422 61.1
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 1.8e-139 500.0 403 64.5
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.0e-138 496.5 405 62.0
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 3.4e-138 495.7 404 64.4
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 5.9e-138 495.0 407 63.6
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.3e-137 493.8 404 63.1
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.3e-137 493.8 404 63.1
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 2.9e-137 492.7 407 62.2
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 5.0e-137 491.9 416 57.7
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.0e-134 484.2 405 62.2
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 1.8e-134 483.4 378 62.7
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.3e-134 483.0 421 57.7
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.3e-134 483.0 412 60.0
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 6.7e-134 481.5 412 58.7
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 3.3e-133 479.2 404 58.7
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.2e-132 476.5 395 62.5
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 1.8e-131 473.4 405 62.2
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 3.1e-131 472.6 404 58.4
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 4.1e-131 472.2 412 59.5
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 6.9e-131 471.5 406 58.4
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 5.9e-130 468.4 411 58.4
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 5.9e-130 468.4 412 58.3
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 6.5e-129 464.9 419 56.3
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 1.1e-128 464.2 377 61.0
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 6.1e-127 458.4 401 57.1
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.8e-126 456.8 412 57.8
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.4e-123 447.2 415 55.9
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 1.5e-122 443.7 360 62.5
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 4.5e-122 442.2 358 62.8
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.1e-117 427.6 361 60.4
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 1.5e-117 427.2 437 50.6
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 7.4e-117 424.9 416 55.0
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.4e-115 420.6 355 60.6
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.9e-114 415.2 352 59.7
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 7.7e-114 414.8 403 52.4
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 5.0e-113 412.1 305 66.2
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 6.5e-113 411.8 408 53.9
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 4.4e-109 399.1 418 51.7
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 6.5e-105 385.2 420 47.6
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.1e-104 384.4 421 47.7
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 3.4e-101 372.9 396 49.5
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.8e-101 371.3 404 49.3
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 1.0e-94 351.3 250 71.2
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 1.8e-94 350.5 404 47.8
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 5.7e-93 345.5 350 53.7
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.3e-92 344.4 314 55.1
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.5e-80 303.5 404 45.0
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 4.0e-70 269.6 416 40.1
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 5.2e-70 269.2 405 38.3
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.2e-67 258.5 272 50.7
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.4e-62 244.6 185 65.9
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 7.1e-59 232.3 170 65.3
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 2.4e-54 217.2 268 44.8
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 8.4e-52 208.8 389 36.5
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 3.9e-49 199.9 353 38.0
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 9.0e-46 188.7 205 50.2
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.0e-45 187.6 156 63.5
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.8e-44 183.3 135 66.7
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.8e-44 183.3 135 67.4
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 2.4e-43 180.6 200 54.0
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 1.0e-41 175.3 108 74.1
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 6.4e-36 156.0 373 29.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 4.2e-35 153.3 265 35.8
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 6.0e-34 149.4 160 50.6
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.9e-32 144.4 130 54.6
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 8.2e-31 139.0 152 53.9
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.5e-29 134.8 249 36.5
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 2.1e-26 124.4 164 48.8
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 3.9e-25 120.2 109 58.7
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.1e-19 102.1 424 23.1
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 5.1e-17 93.2 99 44.4
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 1.7e-12 78.2 109 46.8
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 2.5e-11 74.3 47 66.0
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 2.1e-10 71.2 86 51.2
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 2.1e-10 71.2 86 51.2
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 6.7e-09 66.2 106 29.2


User provided reference genes

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