Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 1.8e-39 165.6 96 100.0
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 1.2e-14 83.2 90 56.7
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 3.5e-14 81.6 90 63.3
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.6e-14 81.3 90 51.1
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 6.0e-14 80.9 92 53.3
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.0e-14 80.9 89 51.7
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 6.0e-14 80.9 89 51.7
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.3e-13 79.7 93 60.2
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 1.3e-13 79.7 91 48.4
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.3e-13 79.7 89 52.8
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.7e-13 79.3 94 46.8
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 1.7e-13 79.3 89 60.7
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 2.3e-13 79.0 95 49.5
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 2.3e-13 79.0 93 57.0
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 2.3e-13 79.0 94 50.0
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.0e-13 78.6 92 46.7
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.0e-13 78.6 93 59.1
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 3.9e-13 78.2 56 69.6
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 8.6e-13 77.0 61 59.0
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.1e-12 76.6 93 59.1
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 1.1e-12 76.6 92 56.5
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.1e-12 76.6 92 52.2
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 1.5e-12 76.3 91 47.3
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.5e-12 76.3 92 50.0
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.5e-12 76.3 92 52.2
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.5e-12 76.3 91 50.5
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.9e-12 75.9 93 58.1
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.9e-12 75.9 93 58.1
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.5e-12 75.5 88 51.1
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 2.5e-12 75.5 92 48.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 3.3e-12 75.1 45 77.8
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 3.3e-12 75.1 98 49.0
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 3.3e-12 75.1 92 45.7
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 5.6e-12 74.3 96 58.3
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 7.3e-12 73.9 88 50.0
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 7.3e-12 73.9 88 50.0
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 9.6e-12 73.6 95 47.4
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 9.6e-12 73.6 101 47.5
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 9.6e-12 73.6 90 52.2
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 9.6e-12 73.6 90 48.9
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 3.6e-11 71.6 91 48.4
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.6e-11 71.6 92 43.5
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 4.7e-11 71.2 58 65.5
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 4.7e-11 71.2 89 46.1
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 4.7e-11 71.2 93 52.7
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 8.1e-11 70.5 96 44.8
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 8.1e-11 70.5 100 45.0
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 8.1e-11 70.5 97 47.4
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 8.1e-11 70.5 93 54.8
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.1e-10 70.1 107 50.5
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.1e-10 70.1 92 40.2
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 1.1e-10 70.1 99 44.4
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.4e-10 69.7 96 43.8
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.4e-10 69.7 97 44.3
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.4e-10 69.7 46 71.7
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 2.4e-10 68.9 104 53.8
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.4e-10 68.9 92 47.8
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 3.1e-10 68.6 92 41.3
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 4.0e-10 68.2 49 69.4
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 4.0e-10 68.2 49 73.5
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.0e-10 68.2 39 79.5
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 5.2e-10 67.8 51 66.7
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 5.2e-10 67.8 51 66.7
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 5.2e-10 67.8 51 66.7
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 5.2e-10 67.8 95 43.2
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 6.8e-10 67.4 63 55.6
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.8e-10 67.4 50 64.0
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.8e-10 67.4 56 60.7
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 6.8e-10 67.4 49 63.3
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 6.8e-10 67.4 95 40.0
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 6.8e-10 67.4 89 42.7
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 8.9e-10 67.0 67 55.2
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 8.9e-10 67.0 92 41.3
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 8.9e-10 67.0 49 63.3
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 8.9e-10 67.0 94 48.9
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 1.2e-09 66.6 62 59.7
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.2e-09 66.6 45 66.7
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 1.5e-09 66.2 51 66.7
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.5e-09 66.2 57 59.6
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.5e-09 66.2 57 59.6
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 1.5e-09 66.2 48 62.5
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 1.5e-09 66.2 48 62.5
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 2.6e-09 65.5 92 46.7
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 3.4e-09 65.1 49 63.3
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 4.4e-09 64.7 89 53.9
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 4.4e-09 64.7 48 60.4
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 4.4e-09 64.7 90 47.8
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 5.8e-09 64.3 46 67.4
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 5.8e-09 64.3 89 56.2
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 9.9e-09 63.5 67 53.7
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 9.9e-09 63.5 67 55.2
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 9.9e-09 63.5 67 55.2
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 9.9e-09 63.5 67 55.2
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 9.9e-09 63.5 67 55.2
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.9e-09 63.5 52 61.5
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.9e-09 63.5 52 61.5
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 9.9e-09 63.5 52 61.5
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 9.9e-09 63.5 48 58.3
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 9.9e-09 63.5 100 49.0
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.3e-08 63.2 63 50.8
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 1.3e-08 63.2 44 63.6
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 1.7e-08 62.8 39 71.8
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 1.7e-08 62.8 41 73.2
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.2e-08 62.4 60 53.3
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 2.9e-08 62.0 51 60.8
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 2.9e-08 62.0 66 57.6
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 3.8e-08 61.6 41 70.7
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 3.8e-08 61.6 62 51.6
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 8.4e-08 60.5 91 51.6
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 1.1e-07 60.1 39 71.8
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 1.1e-07 60.1 39 69.2
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 56 55.4
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 1.9e-07 59.3 38 65.8
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 1.9e-07 59.3 43 65.1
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 5.4e-07 57.8 59 52.5
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 9.3e-07 57.0 99 41.4
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.6e-06 56.2 45 62.2


User provided reference genes

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