Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc168.17 Carica papaya HOM05D001602 ORTHO05D001470 4.7e-109 397.9 202 100.0
Ciclev10024563m.g Citrus clementina HOM05D001602 ORTHO05D001470 1.7e-71 273.1 265 57.4
Atru.chr2.263 Acer truncatum HOM05D001602 ORTHO05D001470 5.2e-68 261.5 271 55.7
TWI81G0762 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 2.6e-67 259.2 265 55.5
Potri.017G153900 Populus trichocarpa HOM05D001602 ORTHO05D001470 4.9e-66 255.0 269 52.8
Glyma.16G128200 Glycine max HOM05D001602 ORTHO05D001470 6.4e-66 254.6 264 55.3
arahy.Tifrunner.gnm1.ann1.PY9KME Arachis hypogaea HOM05D001602 ORTHO05D001470 1.4e-65 253.4 265 54.7
Phvul.004G136600 Phaseolus vulgaris HOM05D001602 ORTHO05D001470 1.9e-65 253.1 264 54.9
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 2.4e-65 252.7 259 55.2
Duzib248G1501 Durio zibethinus HOM05D001602 ORTHO05D001470 5.4e-65 251.5 263 55.5
Medtr6g068940 Medicago truncatula HOM05D001602 ORTHO05D001470 5.4e-65 251.5 264 54.5
arahy.Tifrunner.gnm1.ann1.W1MG13 Arachis hypogaea HOM05D001602 ORTHO05D001470 9.2e-65 250.8 265 54.3
Sabra17G0126100 Salix brachista HOM05D001602 ORTHO05D001470 9.2e-65 250.8 271 52.0
Psat1g018240 Pisum sativum HOM05D001602 ORTHO05D001470 1.6e-64 250.0 264 54.5
Ca_25281_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 3.5e-64 248.8 269 52.8
TPR.G31348 Trifolium pratense HOM05D001602 ORTHO05D001470 4.6e-64 248.4 264 53.8
Lj2g0019069 Lotus japonicus HOM05D001602 ORTHO05D001470 6.0e-64 248.1 255 55.3
arahy.Tifrunner.gnm1.ann1.IXI1D4 Arachis hypogaea HOM05D001602 ORTHO05D001470 3.0e-63 245.7 254 54.3
Sc10g0008650 Simmondsia chinensis HOM05D001602 ORTHO05D001470 6.6e-63 244.6 265 50.9
Manes.02G226200 Manihot esculenta HOM05D001602 ORTHO05D001470 8.6e-63 244.2 264 53.0
Thecc.01G143100 Theobroma cacao HOM05D001602 ORTHO05D001470 8.6e-63 244.2 265 54.0
QL10p033772 Quercus lobata HOM05D001602 ORTHO05D001470 1.1e-62 243.8 265 53.2
Lalb_Chr22g0354061 Lupinus albus HOM05D001602 ORTHO05D001470 1.5e-62 243.4 266 52.6
Gohir.A12G088350 Gossypium hirsutum HOM05D001602 ORTHO05D001470 3.3e-62 242.3 265 54.0
Gohir.D12G086700 Gossypium hirsutum HOM05D001602 ORTHO05D001470 5.6e-62 241.5 265 53.2
Gorai.008G096900 Gossypium raimondii HOM05D001602 ORTHO05D001470 5.6e-62 241.5 265 53.2
PGR044G0265 Punica granatum HOM05D001602 ORTHO05D001470 9.5e-62 240.7 272 52.9
RcHm_v2.0_Chr7g0176921 Rosa chinensis HOM05D001602 ORTHO05D001470 1.2e-61 240.4 282 50.4
Prupe.5G245300 Prunus persica HOM05D001602 ORTHO05D001470 1.6e-61 240.0 277 50.5
GSVIVG01024244001 Vitis vinifera HOM05D001602 ORTHO05D001470 1.6e-61 240.0 260 53.1
VMungo0464G1375 Vigna mungo HOM05D001602 ORTHO05D001470 6.2e-61 238.0 288 50.3
COL.COLO4_12119 Corchorus olitorius HOM05D001552 ORTHO05D003294 1.8e-60 236.5 250 54.4
Peaxi162Scf00075g01540 Petunia axillaris HOM05D001602 ORTHO05D001470 1.8e-60 236.5 244 54.1
FAN04G0471 Fragaria x ananassa HOM05D001602 ORTHO05D001470 2.0e-59 233.0 273 49.1
Nitab4.5_0000242g0140 Nicotiana tabacum HOM05D001602 ORTHO05D001470 5.8e-59 231.5 265 50.9
Eucgr.K02332 Eucalyptus grandis HOM05D001602 ORTHO05D001470 9.8e-59 230.7 268 49.6
FvH4_5g18590 Fragaria vesca HOM05D001602 ORTHO05D001470 2.2e-58 229.6 276 48.9
CDE07G0357 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 2.9e-58 229.2 237 52.7
FAN13G1167 Fragaria x ananassa HOM05D001602 ORTHO05D001470 3.7e-58 228.8 277 48.0
MD06G1241200 Malus domestica HOM05D001602 ORTHO05D001470 3.7e-58 228.8 277 49.1
CANSAT11G0022 Cannabis sativa HOM05D001602 ORTHO05D001470 4.9e-58 228.4 270 48.9
Cc00_g15860 Coffea canephora HOM05D001602 ORTHO05D001470 6.4e-58 228.0 267 50.2
PSO782G0075 Papaver somniferum HOM05D001602 ORTHO05D001470 6.4e-58 228.0 264 47.7
Hund22357 Selenicereus undatus HOM05D001602 ORTHO05D001470 4.1e-57 225.3 260 50.8
Migut.G01316 Erythranthe guttata HOM05D001602 ORTHO05D001470 1.2e-56 223.8 263 48.7
Actinidia34680 Actinidia chinensis HOM05D001602 ORTHO05D001470 4.6e-56 221.9 287 45.6
Solyc08g014040.3 Solanum lycopersicum HOM05D001602 ORTHO05D001470 4.6e-56 221.9 263 49.0
Lsat_1_v5_gn_3_109781 Lactuca sativa HOM05D001602 ORTHO05D001470 6.0e-56 221.5 263 48.3
PGSC0003DMG400014616 Solanum tuberosum HOM05D001602 ORTHO05D001470 7.8e-56 221.1 263 49.0
PSO063G2222 Papaver somniferum HOM05D001602 ORTHO05D001470 1.0e-55 220.7 275 45.1
Sopen08g004920 Solanum pennellii HOM05D001602 ORTHO05D001470 1.0e-55 220.7 263 49.0
EL10Ac4g09667 Beta vulgaris HOM05D001602 ORTHO05D001470 1.3e-55 220.3 264 48.1
CAN.G466.9 Capsicum annuum HOM05D001602 ORTHO05D001470 1.3e-55 220.3 253 50.2
SGA_v2.0_scaffold17G08162 Striga asiatica HOM05D001602 ORTHO05D001470 1.3e-55 220.3 264 48.1
Aqoxy2G00391 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 1.7e-55 219.9 271 47.2
HanXRQChr03g0089261 Helianthus annuus HOM05D001602 ORTHO05D001470 3.0e-55 219.2 261 47.5
SalBow2G2154 Salvia bowleyana HOM05D001602 ORTHO05D001470 3.0e-55 219.2 258 47.7
Hma1.2p1_0816F.1_g223000 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 5.1e-55 218.4 254 48.8
Ah.02g126730 Amaranthus hybridus HOM05D001602 ORTHO05D001470 1.1e-54 217.2 270 48.1
THA.LOC104811422 Tarenaya hassleriana HOM05D001602 ORTHO05D001470 1.1e-54 217.2 279 49.1
AL2G33080 Arabidopsis lyrata HOM05D001602 ORTHO05D001470 4.3e-54 215.3 273 47.3
MSTRG.4296 Avicennia marina HOM05D001602 ORTHO05D001470 2.1e-53 213.0 265 47.2
Dinv11736 Davidia involucrata HOM05D001602 ORTHO05D001470 2.1e-53 213.0 232 53.9
Sp5g28250 Schrenkiella parvula HOM05D001602 ORTHO05D001470 2.8e-53 212.6 279 46.2
BcaC08g45650 Brassica carinata HOM05D001602 ORTHO05D001470 6.2e-53 211.5 278 47.8
A07p29850 Brassica napus HOM05D001602 ORTHO05D001470 6.2e-53 211.5 277 46.9
C06p34070 Brassica napus HOM05D001602 ORTHO05D001470 6.2e-53 211.5 277 46.9
BcaB03g15706 Brassica carinata HOM05D001602 ORTHO05D001470 8.1e-53 211.1 276 47.1
Oeu027750.2 Olea europaea HOM05D001602 ORTHO05D001470 8.1e-53 211.1 305 42.0
BolC6t38522H Brassica oleracea HOM05D001602 ORTHO05D001470 1.8e-52 209.9 278 47.5
MBI03_g11897_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 3.1e-52 209.1 265 46.4
DCAR_005441 Daucus carota HOM05D001602 ORTHO05D001470 4.0e-52 208.8 252 48.8
AT1G73320 Arabidopsis thaliana HOM05D001602 ORTHO05D001470 5.2e-52 208.4 273 46.9
Carub.0002s2007 Capsella rubella HOM05D001602 ORTHO05D001470 5.2e-52 208.4 259 48.3
CARHR066370 Cardamine hirsuta HOM05D001602 ORTHO05D001470 1.5e-51 206.8 272 46.3
Thhalv10018937m.g Eutrema salsugineum HOM05D001602 ORTHO05D001470 2.6e-51 206.1 278 46.8
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.9e-50 201.8 260 46.9
ATR0124G013 Amborella trichopoda HOM05D001602 ORTHO05D001470 2.4e-49 199.5 254 44.9
Aa31LG4G3580 Aethionema arabicum HOM05D001602 ORTHO05D001470 3.2e-49 199.1 191 57.1
Mapoly0115s0038 Marchantia polymorpha HOM05D001602 ORTHO05D001470 1.7e-47 193.4 266 42.5
HPP92_021095 Vanilla planifolia HOM05D001602 ORTHO05D001470 1.5e-46 190.3 264 44.3
Glyma.03G073748 Glycine max HOM05D001602 ORTHO05D001470 2.5e-46 189.5 149 69.8
CiPaw.15G107800 Carya illinoinensis HOM05D001602 ORTHO05D001470 8.1e-45 184.5 132 74.2
Zm00001eb295360 Zea mays HOM05D001602 ORTHO05D001470 8.1e-45 184.5 258 43.0
Os06g0101100 Oryza sativa ssp. japonica HOM05D001602 ORTHO05D001470 2.4e-44 183.0 260 42.7
Rhsim08G0125500 Rhododendron simsii HOM05D001602 ORTHO05D001470 6.8e-44 181.4 266 44.4
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 2.2e-42 176.4 229 47.6
AUR62042010 Chenopodium quinoa HOM05D001602 ORTHO05D001470 6.6e-39 164.9 260 40.8
Pp3c10_13020 Physcomitrium patens HOM05D001602 ORTHO05D001470 2.5e-38 162.9 254 40.2
Nn3g18545 Nelumbo nucifera HOM05D001602 ORTHO05D001470 2.4e-36 156.4 195 48.2
SMO351G0211 Selaginella moellendorffii HOM05D001602 ORTHO05D001470 6.9e-36 154.8 229 41.0
BraA07t30623Z Brassica rapa HOM05D000058 ORTHO05D000255 4.9e-34 148.7 248 41.5
AagrBONN_evm.TU.Sc2ySwM_362.258 Anthoceros agrestis HOM05D001602 ORTHO05D001470 2.4e-33 146.4 211 44.5
Lj6P105T20 Lonicera japonica HOM05D001602 ORTHO05D001470 3.2e-33 146.0 175 47.4
AUR62038565 Chenopodium quinoa HOM05D001602 ORTHO05D001470 3.0e-31 139.4 113 67.3
Nitab4.5_0003499g0010 Nicotiana tabacum HOM05D001602 ORTHO05D001470 5.6e-30 135.2 211 44.1
vmacro17753 Vaccinium macrocarpon HOM05D001602 ORTHO05D001470 9.6e-30 134.4 189 44.4
ECA240G4616 Erigeron canadensis HOM05D001602 ORTHO05D001470 1.2e-27 127.5 175 42.9
Nitab4.5_0010815g0010 Nicotiana tabacum HOM05D001602 ORTHO05D001470 1.5e-27 127.1 197 45.7
MBI03_g44530_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 1.7e-26 123.6 171 42.7
CSS0012428 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 2.9e-26 122.9 153 47.1
SEGI_26569 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 2.9e-26 122.9 96 64.6
Lj6C106G8 Lonicera japonica HOM05D001602 ORTHO05D001470 3.5e-24 115.9 178 41.6
Atru.chr9.22 Acer truncatum HOM05D001602 ORTHO05D001470 7.4e-22 108.2 198 40.4
Peaxi162Scf00141g00215 Petunia axillaris HOM05D001602 ORTHO05D001470 2.0e-19 100.1 70 67.1
AUR62038564 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-16 89.7 70 60.0
CSS0041168 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 1.3e-15 87.4 72 63.9
CSS0042158 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 1.3e-15 87.4 72 63.9
CSS0031987 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 1.5e-14 84.0 100 48.0
MBI03_g13433_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 1.6e-13 80.5 144 36.8
vmacro17754 Vaccinium macrocarpon HOM05D001602 ORTHO05D001470 2.1e-13 80.1 91 53.8
Glyma.16G210702 Glycine max HOM05D001602 ORTHO05D001470 1.0e-10 71.2 61 62.3
CSS0010586 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 1.3e-10 70.9 53 62.3
MD14G1247200 Malus domestica HOM05D001602 ORTHO05D001470 1.3e-10 70.9 46 76.1
Cc00_g15870 Coffea canephora HOM05D001602 ORTHO05D001470 1.7e-10 70.5 61 62.3
Hma1.2p1_0098F.1_g048250 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 1.4e-09 67.4 48 66.7
CSS0029960 Camellia sinensis var. sinensis HOM05D001602 ORTHO05D001470 2.5e-09 66.6 53 58.5
AagrBONN_evm.TU.Sc2ySwM_362.616 Anthoceros agrestis HOM05D001602 ORTHO05D001470 2.1e-08 63.5 49 63.3
MD14G1247100 Malus domestica HOM05D001602 ORTHO05D001470 1.9e-06 57.0 39 66.7


User provided reference genes

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