Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1515.1 Carica papaya HOM05D004479 ORTHO05D005597 6.8e-35 150.6 106 100.0
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.2e-20 103.2 108 77.8
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.6e-20 101.7 109 76.1
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.1e-19 100.1 108 69.4
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.1e-19 100.1 112 81.2
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 5.2e-19 97.8 108 73.1
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 4.4e-18 94.7 109 75.2
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 4.4e-18 94.7 109 77.1
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 7.5e-18 94.0 108 74.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 4.9e-17 91.3 111 73.0
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 1.4e-16 89.7 107 71.0
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 2.4e-16 89.0 98 74.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 4.1e-16 88.2 107 72.0
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 4.1e-16 88.2 107 62.6
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 5.4e-16 87.8 96 70.8
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 7.1e-16 87.4 112 71.4
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 1.2e-15 86.7 101 76.2
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.2e-15 86.7 108 59.3
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 2.1e-15 85.9 107 75.7
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 2.1e-15 85.9 109 73.4
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 3.5e-15 85.1 110 70.9
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 4.6e-15 84.7 109 73.4
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 1.7e-14 82.8 118 67.8
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 2.3e-14 82.4 96 69.8
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 3.0e-14 82.0 114 72.8
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 3.9e-14 81.6 104 59.6
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 5.1e-14 81.3 116 49.1
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 5.1e-14 81.3 105 61.0
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 5.1e-14 81.3 107 73.8
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 1.5e-13 79.7 110 60.9
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 3.3e-13 78.6 112 70.5
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 4.7e-12 74.7 90 73.3
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 6.2e-12 74.3 104 73.1
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 8.1e-12 73.9 115 50.4
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.4e-11 73.2 109 54.1
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 3.1e-11 72.0 114 67.5
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 4.0e-11 71.6 111 64.0
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 6.8e-11 70.9 91 56.0
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 6.8e-11 70.9 110 61.8
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.2e-10 70.1 87 78.2
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 1.5e-10 69.7 108 63.0
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 2.6e-10 68.9 105 59.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.4e-10 68.6 114 68.4
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 3.4e-10 68.6 128 60.2
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 4.4e-10 68.2 112 58.0
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 9.9e-10 67.0 112 61.6
QL05p046913 Quercus lobata HOM05D004479 ORTHO05D005597 1.3e-09 66.6 82 62.2
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.2e-09 65.9 109 67.0
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 2.9e-09 65.5 92 71.7
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 4.9e-09 64.7 105 60.0
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 6.4e-09 64.3 120 63.3
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 8.4e-09 63.9 110 68.2
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 1.1e-08 63.5 106 60.4
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.9e-08 62.8 106 62.3
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 5.4e-08 61.2 114 48.2
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 7.1e-08 60.8 79 77.2
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.6e-07 59.7 107 59.8
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.6e-07 59.7 109 47.7
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 2.1e-07 59.3 108 43.5
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 2.7e-07 58.9 105 67.6
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 2.7e-07 58.9 117 62.4
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 4.6e-07 58.2 90 63.3
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 6.0e-07 57.8 111 61.3
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 1.0e-06 57.0 42 83.3
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.0e-06 57.0 42 83.3
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.3e-06 56.6 44 77.3
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 1.3e-06 56.6 119 62.2
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 2.3e-06 55.8 44 77.3
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 3.0e-06 55.5 45 75.6
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 3.9e-06 55.1 106 60.4
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 5.1e-06 54.7 108 60.2
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 5.1e-06 54.7 115 61.7
Psat0s1762g0040 Pisum sativum HOM05D004479 ORTHO05D005597 6.6e-06 54.3 43 76.7
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 8.6e-06 53.9 44 72.7


User provided reference genes

Program Settings