Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1485.1 Carica papaya HOM05D067310 ORTHO05D028541 1.0e-54 216.5 106 100.0
Cpa.g.sc217.5 Carica papaya HOM05D002754 ORTHO05D003271 1.1e-19 100.1 104 48.1
Cpa.g.sc1813.1 Carica papaya HOM05D067310 ORTHO05D028541 1.8e-11 72.8 50 76.0
Cpa.g.sc1258.2 Carica papaya HOM05D000003 ORTHO05D000126 1.7e-09 66.2 100 38.0
CANSAT25G1151 Cannabis sativa HOM05D000003 ORTHO05D000126 2.2e-09 65.9 105 36.2
CANSAT80G0750 Cannabis sativa HOM05D000003 ORTHO05D000126 4.9e-09 64.7 103 38.8
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-08 63.5 104 36.5
CANSAT01G2193 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-08 63.2 103 35.9
CANSAT64G1035 Cannabis sativa HOM05D000003 ORTHO05D000126 1.4e-08 63.2 105 32.4
CANSAT25G0383 Cannabis sativa HOM05D000003 ORTHO05D000126 1.9e-08 62.8 79 41.8
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.4e-08 62.4 73 45.2
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-08 62.0 80 42.5
CANSAT35G1890 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.6 100 35.0
CANSAT56G0389 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.6 76 43.4
CANSAT56G1659 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.6 80 40.0
CANSAT80G2209 Cannabis sativa HOM05D000003 ORTHO05D000126 4.1e-08 61.6 105 31.4
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.4e-08 61.2 73 43.8
CANSAT01G2120 Cannabis sativa HOM05D000003 ORTHO05D000126 5.4e-08 61.2 80 41.2
CANSAT25G2375 Cannabis sativa HOM05D000003 ORTHO05D000126 7.1e-08 60.8 100 35.0
CANSAT25G2776 Cannabis sativa HOM05D000003 ORTHO05D000126 7.1e-08 60.8 80 40.0
CANSAT54G2916 Cannabis sativa HOM05D000003 ORTHO05D000126 7.1e-08 60.8 100 35.0
CANSAT56G0419 Cannabis sativa HOM05D000003 ORTHO05D000126 9.2e-08 60.5 79 44.3
CANSAT56G3060 Cannabis sativa HOM05D000003 ORTHO05D000126 9.2e-08 60.5 78 44.9
CANSAT64G1905 Cannabis sativa HOM05D000003 ORTHO05D000126 9.2e-08 60.5 79 41.8
CANSAT01G1600 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-07 60.1 78 39.7
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.2e-07 60.1 80 35.0
Manes.18G119120 Manihot esculenta HOM05D000003 ORTHO05D000126 1.2e-07 60.1 76 43.4
CANSAT01G1699 Cannabis sativa HOM05D000003 ORTHO05D000126 1.6e-07 59.7 99 33.3
TPR.G31906 Trifolium pratense HOM05D000003 ORTHO05D000006 1.6e-07 59.7 113 35.4
CANSAT01G2293 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 39.7
CANSAT21G1230 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 41.0
CANSAT25G0311 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 41.0
CANSAT56G1743 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 76 43.4
CANSAT56G2563 Cannabis sativa HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 43.6
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 2.1e-07 59.3 78 42.3
CANSAT01G0704 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-07 58.9 100 36.0
CANSAT25G1688 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-07 58.9 100 36.0
CANSAT35G1841 Cannabis sativa HOM05D000003 ORTHO05D000126 2.7e-07 58.9 100 37.0
Lj9C2T0 Lonicera japonica HOM05D000003 ORTHO05D000126 2.7e-07 58.9 81 35.8
CANSAT11G0488 Cannabis sativa HOM05D000003 ORTHO05D000126 3.5e-07 58.5 52 55.8
CANSAT54G0414 Cannabis sativa HOM05D000003 ORTHO05D000006 3.5e-07 58.5 52 55.8
CANSAT56G0696 Cannabis sativa HOM05D000003 ORTHO05D000126 3.5e-07 58.5 77 39.0
CANSAT78G0953 Cannabis sativa HOM05D000003 ORTHO05D000006 3.5e-07 58.5 80 40.0
Lj3P316T7 Lonicera japonica HOM05D000003 ORTHO05D000126 3.5e-07 58.5 99 38.4
CANSAT25G2150 Cannabis sativa HOM05D000003 ORTHO05D000126 4.6e-07 58.2 99 35.4
CANSAT25G3681 Cannabis sativa HOM05D000003 ORTHO05D000126 4.6e-07 58.2 77 39.0
CANSAT01G1830 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 78 39.7
CANSAT11G0372 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 77 37.7
CANSAT11G0462 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 78 37.2
CANSAT21G0764 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 52 55.8
CANSAT21G1968 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 105 37.1
CANSAT35G1319 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 77 37.7
CANSAT35G1400 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 78 39.7
CANSAT54G2829 Cannabis sativa HOM05D000003 ORTHO05D000126 6.0e-07 57.8 77 39.0
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.8e-07 57.4 73 46.6
CANSAT21G0980 Cannabis sativa HOM05D000003 ORTHO05D000126 7.8e-07 57.4 94 37.2
CANSAT25G1596 Cannabis sativa HOM05D000003 ORTHO05D000126 7.8e-07 57.4 95 34.7
CANSAT64G0573 Cannabis sativa HOM05D000003 ORTHO05D000126 7.8e-07 57.4 95 35.8
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-06 57.0 80 38.8
Lj5P270T37 Lonicera japonica HOM05D000003 ORTHO05D000126 1.0e-06 57.0 78 38.5
CANSAT21G2271 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.6 80 38.8
CANSAT21G2347 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.6 75 41.3
CANSAT25G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.6 78 41.0
CANSAT64G0848 Cannabis sativa HOM05D000003 ORTHO05D000126 1.3e-06 56.6 78 38.5
CANSAT01G0549 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-06 56.2 96 32.3
CANSAT25G1444 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-06 56.2 80 38.8
CANSAT35G1211 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-06 56.2 80 41.2
Cpa.g.sc491.1 Carica papaya HOM05D000003 ORTHO05D028541 1.7e-06 56.2 37 75.7
QL12p041140 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 56.2 53 45.3
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.3e-06 55.8 73 41.1
CANSAT11G2125 Cannabis sativa HOM05D000003 ORTHO05D000126 2.3e-06 55.8 80 41.2
CANSAT21G1411 Cannabis sativa HOM05D000003 ORTHO05D000126 2.3e-06 55.8 102 33.3
CANSAT64G1968 Cannabis sativa HOM05D000003 ORTHO05D000126 2.3e-06 55.8 95 34.7
Lj2C538T6 Lonicera japonica HOM05D000003 ORTHO05D000126 2.3e-06 55.8 84 36.9
CANSAT56G1129 Cannabis sativa HOM05D000003 ORTHO05D000126 3.0e-06 55.5 75 41.3
CANSAT56G2562 Cannabis sativa HOM05D000003 ORTHO05D000126 3.0e-06 55.5 105 29.5
Cpa.g.c46378 Carica papaya HOM05D000003 ORTHO05D000126 3.0e-06 55.5 37 75.7
SHI39369 Sapria himalayana HOM05D000003 ORTHO05D000006 3.0e-06 55.5 101 31.7
CANSAT01G2714 Cannabis sativa HOM05D000003 ORTHO05D000126 3.9e-06 55.1 78 38.5
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-06 55.1 80 32.5
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 3.9e-06 55.1 80 33.8
Lj4C700T0 Lonicera japonica HOM05D000003 ORTHO05D000126 3.9e-06 55.1 80 35.0
Lj8P336T24 Lonicera japonica HOM05D000003 ORTHO05D000126 3.9e-06 55.1 74 41.9
QL02p097725 Quercus lobata HOM05D000003 ORTHO05D000004 3.9e-06 55.1 74 37.8
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 5.1e-06 54.7 80 35.0
CANSAT56G0528 Cannabis sativa HOM05D000003 ORTHO05D000126 5.1e-06 54.7 80 40.0
CANSAT78G1810 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-06 54.7 103 29.1
Dinv06832 Davidia involucrata HOM05D000003 ORTHO05D000126 5.1e-06 54.7 71 40.8
Atru.chr13.2021 Acer truncatum HOM05D000003 ORTHO05D000126 6.6e-06 54.3 80 42.5
CANSAT01G0472 Cannabis sativa HOM05D000003 ORTHO05D000126 6.6e-06 54.3 74 37.8
CANSAT51G0005 Cannabis sativa HOM05D000003 ORTHO05D000126 6.6e-06 54.3 78 37.2
CANSAT78G2331 Cannabis sativa HOM05D000003 ORTHO05D000126 6.6e-06 54.3 105 35.2
CANSAT80G1454 Cannabis sativa HOM05D000003 ORTHO05D000126 6.6e-06 54.3 52 48.1
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 6.6e-06 54.3 79 41.8
Lj8P674T6 Lonicera japonica HOM05D000003 ORTHO05D000126 6.6e-06 54.3 84 32.1
CANSAT56G1157 Cannabis sativa HOM05D000003 ORTHO05D000004 8.6e-06 53.9 74 40.5
Gohir.A11G107200 Gossypium hirsutum HOM05D029142 ORTHO05D028541 8.6e-06 53.9 65 43.1
QL09p032832 Quercus lobata HOM05D000003 ORTHO05D000126 8.6e-06 53.9 78 37.2


User provided reference genes

Program Settings