Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.36 Carica papaya HOM05D002984 ORTHO05D003561 4.1e-167 591.3 289 100.0
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.6e-38 164.1 182 45.6
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 2.6e-36 156.8 168 46.4
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 2.6e-36 156.8 152 49.3
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 9.8e-36 154.8 183 46.4
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 1.3e-35 154.5 183 43.7
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.7e-35 154.1 168 45.2
CSS0018296 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 3.7e-35 152.9 183 43.2
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 3.7e-35 152.9 183 42.1
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 3.7e-35 152.9 184 43.5
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 4.9e-35 152.5 159 46.5
TAR622G0040 Trochodendron aralioides HOM05D002984 ORTHO05D003561 6.4e-35 152.1 163 46.0
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 8.3e-35 151.8 164 48.2
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 8.3e-35 151.8 161 46.0
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 8.3e-35 151.8 155 47.1
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.1e-34 151.4 163 47.2
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 1.1e-34 151.4 183 42.6
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 1.1e-34 151.4 168 45.8
Gorai.013G080300 Gossypium raimondii HOM05D002984 ORTHO05D003561 3.2e-34 149.8 153 47.7
Gohir.D13G070100 Gossypium hirsutum HOM05D002984 ORTHO05D003561 5.4e-34 149.1 153 47.7
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 5.4e-34 149.1 161 44.7
Gohir.A13G053428 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.2e-33 147.9 150 48.0
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.2e-33 147.9 168 44.0
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 1.6e-33 147.5 188 43.1
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.6e-33 147.5 171 45.6
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 2.0e-33 147.1 166 44.6
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.0e-33 147.1 153 46.4
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.0e-33 147.1 153 46.4
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 2.0e-33 147.1 153 46.4
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 2.7e-33 146.7 188 42.0
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 4.6e-33 146.0 163 44.2
FAN12G2547 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.6e-33 146.0 163 44.2
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 4.6e-33 146.0 182 41.2
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 6.0e-33 145.6 180 42.8
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 6.0e-33 145.6 153 46.4
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 7.8e-33 145.2 168 42.9
Sc25g0002400 Simmondsia chinensis HOM05D002984 ORTHO05D003561 7.8e-33 145.2 157 47.1
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 1.0e-32 144.8 190 42.6
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 1.7e-32 144.1 153 45.1
Lj2g0026621 Lotus japonicus HOM05D002984 ORTHO05D003561 3.0e-32 143.3 186 41.9
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 3.0e-32 143.3 168 44.6
COL.COLO4_07881 Corchorus olitorius HOM05D002984 ORTHO05D003561 5.0e-32 142.5 153 45.1
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 6.6e-32 142.1 153 46.4
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 6.6e-32 142.1 164 43.9
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 1.1e-31 141.4 153 43.8
Lsat_1_v5_gn_3_60001 Lactuca sativa HOM05D002984 ORTHO05D003561 1.1e-31 141.4 167 42.5
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 1.1e-31 141.4 184 38.6
Psat2g101040 Pisum sativum HOM05D002984 ORTHO05D003561 1.1e-31 141.4 166 42.2
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 1.1e-31 141.4 179 40.8
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 1.5e-31 141.0 166 43.4
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 1.5e-31 141.0 166 43.4
Dinv40427 Davidia involucrata HOM05D002984 ORTHO05D003561 1.5e-31 141.0 166 46.4
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 1.5e-31 141.0 155 43.9
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 1.5e-31 141.0 184 39.1
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 1.9e-31 140.6 153 43.8
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 1.9e-31 140.6 153 43.1
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-31 140.6 160 43.1
vmacro10537 Vaccinium macrocarpon HOM05D002984 ORTHO05D003561 1.9e-31 140.6 161 44.1
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 2.5e-31 140.2 167 45.5
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 2.5e-31 140.2 164 41.5
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 2.5e-31 140.2 179 40.8
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 2.5e-31 140.2 166 42.2
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 4.3e-31 139.4 186 40.9
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 5.6e-31 139.0 186 39.2
Lj2g0022832 Lotus japonicus HOM05D002984 ORTHO05D003561 5.6e-31 139.0 164 42.1
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 5.6e-31 139.0 182 41.2
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 7.3e-31 138.7 166 42.2
Glyma.02G098500 Glycine max HOM05D002984 ORTHO05D003561 7.3e-31 138.7 157 42.7
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 7.3e-31 138.7 182 40.7
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 9.5e-31 138.3 160 41.9
Lj2g0024103 Lotus japonicus HOM05D002984 ORTHO05D003561 9.5e-31 138.3 164 42.1
SHI14503 Sapria himalayana HOM05D002984 ORTHO05D003561 9.5e-31 138.3 174 42.5
AUR62002298 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.2e-30 137.9 153 45.8
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 1.2e-30 137.9 170 40.6
Dinv21122 Davidia involucrata HOM05D002984 ORTHO05D003561 1.2e-30 137.9 168 43.5
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 1.2e-30 137.9 183 41.0
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.2e-30 137.9 183 41.5
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 1.2e-30 137.9 167 43.1
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 1.6e-30 137.5 183 40.4
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 1.6e-30 137.5 183 40.4
FvH4_5g05460 Fragaria vesca HOM05D002984 ORTHO05D003561 2.8e-30 136.7 171 42.7
Glyma.01G086600 Glycine max HOM05D002984 ORTHO05D003561 2.8e-30 136.7 164 42.7
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 2.8e-30 136.7 182 39.6
HanXRQChr17g0552241 Helianthus annuus HOM05D002984 ORTHO05D003561 3.6e-30 136.3 182 44.0
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 3.6e-30 136.3 164 45.7
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 3.6e-30 136.3 263 34.6
ATR0681G393 Amborella trichopoda HOM05D002984 ORTHO05D003561 1.1e-29 134.8 177 45.8
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 1.4e-29 134.4 168 41.7
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 1.4e-29 134.4 153 44.4
FAN13G2905 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.4e-29 134.4 161 43.5
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 2.3e-29 133.7 180 38.9
SGA_v2.0_scaffold14G06838 Striga asiatica HOM05D002984 ORTHO05D003561 2.3e-29 133.7 160 40.6
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 4.0e-29 132.9 180 40.0
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 4.0e-29 132.9 165 41.8
Nitab4.5_0005194g0020 Nicotiana tabacum HOM05D002984 ORTHO05D003561 5.2e-29 132.5 153 41.2
BolC3t19582H Brassica oleracea HOM05D002984 ORTHO05D003561 6.8e-29 132.1 158 43.0
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 8.9e-29 131.7 165 41.2
BraA08t34651Z Brassica rapa HOM05D002984 ORTHO05D003561 8.9e-29 131.7 165 41.2
Eucgr.D01061 Eucalyptus grandis HOM05D002984 ORTHO05D003561 8.9e-29 131.7 157 42.0
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 1.2e-28 131.3 155 42.6
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 1.5e-28 131.0 180 39.4
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 1.5e-28 131.0 180 38.9
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 2.0e-28 130.6 165 41.8
C05p24920 Brassica napus HOM05D002984 ORTHO05D003561 2.0e-28 130.6 165 41.8
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 2.0e-28 130.6 165 41.8
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 3.4e-28 129.8 150 43.3
QL10p023599 Quercus lobata HOM05D002984 ORTHO05D003561 4.4e-28 129.4 186 39.8
Ah.13g072880 Amaranthus hybridus HOM05D002984 ORTHO05D003561 5.8e-28 129.0 185 38.4
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 5.8e-28 129.0 165 41.2
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 5.8e-28 129.0 165 41.2
MBI01_g32855_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 9.8e-28 128.3 186 41.9
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 1.3e-27 127.9 180 37.8
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 1.7e-27 127.5 156 42.3
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 2.9e-27 126.7 161 39.1
Oeu041887.1 Olea europaea HOM05D002984 ORTHO05D003561 2.9e-27 126.7 163 38.7
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 6.4e-27 125.6 183 37.7
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 1.1e-26 124.8 138 45.7
FvH4_5g12610 Fragaria vesca HOM05D002984 ORTHO05D003561 1.4e-26 124.4 191 41.9
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.4e-26 124.4 164 41.5
FAN18G2176 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-26 124.0 191 41.4
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 2.4e-26 123.6 287 29.3
Solyc05g009710.4 Solanum lycopersicum HOM05D002984 ORTHO05D003561 1.2e-25 121.3 176 39.2
FAN13G1615 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.1e-25 120.6 200 41.5
FAN04G1620 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.7e-25 120.2 191 40.3
FAN18G0496 Fragaria x ananassa HOM05D002984 ORTHO05D003561 6.0e-25 119.0 193 40.9
Nitab4.5_0000672g0110 Nicotiana tabacum HOM05D002984 ORTHO05D003561 7.8e-25 118.6 141 41.8
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 1.0e-24 118.2 135 45.9
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 1.3e-24 117.9 197 36.5
Rhsim09G0111200 Rhododendron simsii HOM05D002984 ORTHO05D000550 8.6e-24 115.2 136 42.6
Lsat_1_v5_gn_4_19021 Lactuca sativa HOM05D002984 ORTHO05D003561 1.1e-23 114.8 139 45.3
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 4.3e-23 112.8 148 43.2
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 4.7e-22 109.4 138 38.4
GSVIVG01008248001 Vitis vinifera HOM05D002984 ORTHO05D003561 4.7e-22 109.4 123 45.5
PGSC0003DMG401000817 Solanum tuberosum HOM05D002984 ORTHO05D003561 1.1e-21 108.2 136 43.4
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 1.8e-21 107.5 176 36.4
Sabra02G0035000 Salix brachista HOM05D002984 ORTHO05D003561 8.9e-21 105.1 173 35.8
RcHm_v2.0_Chr7g0184721 Rosa chinensis HOM05D002984 ORTHO05D003561 2.6e-20 103.6 148 44.6
SMO356G0715 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 1.3e-19 101.3 133 44.4
BcaC05g26654 Brassica carinata HOM05D002984 ORTHO05D003561 1.1e-18 98.2 163 31.9
Actinidia39817 Actinidia chinensis HOM05D002984 ORTHO05D003561 4.1e-18 96.3 141 41.1
FAN10G3298 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.1e-18 96.3 197 31.5
Pp3c25_2430 Physcomitrium patens HOM05D002984 ORTHO05D003561 4.1e-18 96.3 128 40.6
FAN18G2442 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.1e-17 94.0 171 33.9
FAN18G3612 Fragaria x ananassa HOM05D002984 ORTHO05D003561 2.1e-17 94.0 171 33.9
FAN03G1604 Fragaria x ananassa HOM05D002984 ORTHO05D003561 4.6e-17 92.8 135 38.5
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 4.6e-17 92.8 128 40.6
CAN.G674.44 Capsicum annuum HOM05D002984 ORTHO05D003561 1.1e-15 88.2 125 42.4
Sc04g0003680 Simmondsia chinensis HOM05D002984 ORTHO05D003561 2.8e-14 83.6 182 28.6
Nitab4.5_0000489g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 8.1e-14 82.0 70 50.0
Peaxi162Scf00004g01519 Petunia axillaris HOM05D002984 ORTHO05D003561 8.1e-14 82.0 70 50.0
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 2.4e-13 80.5 73 50.7
Psat1g039440 Pisum sativum HOM05D002984 ORTHO05D022868 2.6e-12 77.0 131 34.4
SMO340G0161 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 2.6e-12 77.0 131 38.2
TPR.G31455 Trifolium pratense HOM05D002984 ORTHO05D022868 2.6e-12 77.0 131 35.1
ECA246G2084 Erigeron canadensis HOM05D002984 ORTHO05D003561 5.8e-12 75.9 142 36.6
Peaxi162Scf00004g01518 Petunia axillaris HOM05D002984 ORTHO05D003561 5.8e-12 75.9 89 42.7
VMungo0464G0094 Vigna mungo HOM05D002984 ORTHO05D014229 5.8e-12 75.9 155 32.3
Medtr6g085080 Medicago truncatula HOM05D002984 ORTHO05D022868 1.7e-11 74.3 131 35.9
Lalb_Chr14g0371321 Lupinus albus HOM05D002984 ORTHO05D003561 2.2e-11 73.9 164 31.7
Medtr6g085100 Medicago truncatula HOM05D002984 ORTHO05D022868 2.2e-11 73.9 131 35.9
Phvul.004G160600 Phaseolus vulgaris HOM05D002984 ORTHO05D014229 3.8e-11 73.2 126 34.9
Nitab4.5_0000489g0040 Nicotiana tabacum HOM05D002984 ORTHO05D003561 6.4e-11 72.4 89 40.4
CDE08G0495 Ceratophyllum demersum HOM05D002984 ORTHO05D003561 1.1e-10 71.6 72 48.6
CAN.G2.30 Capsicum annuum HOM05D002984 ORTHO05D003561 1.4e-10 71.2 80 41.2
Lj2g0016414 Lotus japonicus HOM05D002984 ORTHO05D022868 2.4e-10 70.5 129 34.9
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 7.1e-10 68.9 79 48.1
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 7.1e-10 68.9 79 48.1
ECA246G1507 Erigeron canadensis HOM05D002984 ORTHO05D003561 9.3e-10 68.6 158 31.0
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 2.1e-09 67.4 101 38.6
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 2.1e-09 67.4 102 40.2
Lj6C764G10 Lonicera japonica HOM05D002984 ORTHO05D003561 2.1e-09 67.4 70 44.3
Lalb_Chr11g0074771 Lupinus albus HOM05D002984 ORTHO05D003561 2.7e-09 67.0 149 32.9
Lalb_Chr00c63g0413851 Lupinus albus HOM05D002984 ORTHO05D003561 3.5e-09 66.6 112 38.4
Lalb_Chr08g0231921 Lupinus albus HOM05D002984 ORTHO05D003561 3.5e-09 66.6 112 38.4
arahy.Tifrunner.gnm1.ann1.48S2GI Arachis hypogaea HOM05D002984 ORTHO05D003561 4.6e-09 66.2 186 25.3
arahy.Tifrunner.gnm1.ann1.53ZNG0 Arachis hypogaea HOM05D002984 ORTHO05D003561 4.6e-09 66.2 186 25.3
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 4.6e-09 66.2 132 34.8
Nitab4.5_0000597g0030 Nicotiana tabacum HOM05D002984 ORTHO05D003561 6.0e-09 65.9 83 41.0
Sopen05g005530 Solanum pennellii HOM05D002984 ORTHO05D003561 2.3e-08 63.9 78 42.3
Lj9A429G49 Lonicera japonica HOM05D002984 ORTHO05D003561 1.1e-07 61.6 88 36.4
Hund25094 Selenicereus undatus HOM05D002984 ORTHO05D003561 7.3e-07 58.9 96 36.5


User provided reference genes

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