Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 0.0e+00 1523.1 776 100.0
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 3.1e-153 546.6 783 45.3
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 8.5e-151 538.5 822 44.5
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.0e-148 530.0 806 44.4
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 6.7e-148 528.9 794 44.2
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 9.7e-147 525.0 786 45.8
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 2.5e-142 510.4 795 44.4
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 3.2e-142 510.0 773 44.8
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 3.9e-140 503.1 802 43.8
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 5.2e-140 502.7 800 43.2
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 7.0e-137 492.3 792 43.9
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 4.7e-133 479.6 775 42.6
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.4e-132 478.0 810 42.6
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 4.8e-130 469.5 811 41.2
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.4e-129 468.0 804 41.2
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.7e-125 453.8 797 40.8
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.0e-124 449.9 877 39.0
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.2e-123 448.4 796 41.1
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 2.6e-123 447.2 797 40.2
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 9.8e-123 445.3 793 41.1
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 5.9e-120 436.0 787 41.0
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.0e-119 435.3 808 39.5
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.3e-119 434.9 798 39.8
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.3e-119 434.1 793 40.1
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.3e-119 434.1 642 45.6
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-118 431.8 819 39.7
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.6e-117 427.9 787 39.8
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.8e-111 406.8 755 39.6
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.8e-108 397.9 791 38.6
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 4.9e-106 389.8 637 42.5
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 7.0e-105 386.0 640 43.6
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.3e-103 381.7 790 37.1
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.1e-102 378.6 632 41.9
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 3.3e-102 377.1 889 36.0
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 9.5e-102 375.6 798 37.3
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.6e-101 374.8 552 44.7
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.0e-100 370.2 799 36.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 1.5e-99 368.2 660 41.4
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 7.0e-97 359.4 790 35.1
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 3.5e-96 357.1 807 36.2
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 1.5e-94 351.7 801 34.7
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.6e-94 349.7 798 36.0
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 1.6e-93 348.2 811 35.9
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 1.6e-93 348.2 811 35.9
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.6e-93 348.2 839 35.0
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 4.0e-92 343.6 611 40.3
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 2.6e-91 340.9 812 35.5
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 3.7e-90 337.0 802 34.2
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 4.9e-90 336.7 814 35.7
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 2.4e-89 334.3 814 36.1
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 4.1e-89 333.6 791 35.4
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 7.1e-89 332.8 803 34.0
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.3e-87 328.6 781 34.3
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.3e-87 328.6 865 34.8
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.3e-87 328.6 777 34.1
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 2.3e-87 327.8 717 37.2
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 5.1e-87 326.6 848 34.3
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 8.6e-87 325.9 587 38.7
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 1.9e-86 324.7 562 39.7
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 2.5e-86 324.3 802 35.0
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 7.3e-86 322.8 773 34.4
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.2e-85 322.0 835 33.8
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 1.6e-85 321.6 784 35.1
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 4.7e-85 320.1 798 34.1
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 3.1e-84 317.4 773 33.9
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 1.2e-83 315.5 510 38.8
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 2.0e-83 314.7 783 35.2
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 9.9e-83 312.4 840 32.3
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.7e-82 311.6 834 33.1
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 2.2e-82 311.2 783 34.7
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 2.9e-82 310.8 789 33.8
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.1e-81 308.9 864 31.8
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.4e-81 308.5 872 32.7
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 2.4e-81 307.8 566 39.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 5.4e-81 306.6 851 33.6
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 9.2e-81 305.8 817 33.3
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 2.7e-80 304.3 769 33.0
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 7.8e-80 302.8 552 39.7
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.3e-79 302.0 791 33.1
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.7e-79 301.6 582 39.5
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.1e-78 298.9 795 33.1
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 9.6e-78 295.8 781 33.5
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.2e-75 288.9 806 31.3
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 2.0e-75 288.1 285 57.9
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 7.6e-75 286.2 774 33.2
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 1.7e-74 285.0 489 41.3
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 8.4e-74 282.7 861 30.3
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 1.9e-73 281.6 868 30.3
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 4.2e-73 280.4 568 38.4
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 7.1e-73 279.6 854 30.8
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 3.0e-71 274.2 889 29.9
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.4e-68 265.4 548 37.2
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 1.8e-68 265.0 666 34.5
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 5.3e-68 263.5 559 35.4
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 9.9e-59 232.6 521 36.1
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.7e-56 224.6 781 29.6
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 5.5e-49 200.3 574 32.4
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 6.0e-48 196.8 567 33.0
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 6.0e-48 196.8 573 32.1
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 6.7e-47 193.4 580 32.6
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.5e-46 192.2 804 29.0
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.8e-44 185.3 608 30.4
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 5.3e-44 183.7 510 30.8
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 2.2e-42 178.3 370 38.4
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 8.5e-42 176.4 535 31.0
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.4e-35 154.5 155 53.5
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 4.5e-35 154.1 647 25.8
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.7e-21 107.8 171 40.4
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 2.6e-14 85.1 238 31.9
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.2e-10 72.0 409 22.7
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.7e-08 64.3 487 21.8
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.7e-08 64.3 487 21.8
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 2.3e-07 62.0 209 30.6
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 6.8e-07 60.5 81 40.7


User provided reference genes

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