Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 0.0e+00 1177.2 605 100.0
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 3.4e-216 755.4 652 63.0
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 6.5e-215 751.1 652 63.0
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 6.5e-215 751.1 650 62.3
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 1.9e-214 749.6 650 62.3
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.7e-210 735.3 652 60.7
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.1e-209 733.8 651 60.7
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 6.9e-209 731.1 651 61.3
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.5e-208 729.9 652 60.4
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 1.5e-208 729.9 655 60.9
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 5.9e-208 728.0 653 60.6
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 1.3e-207 726.9 651 60.1
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.9e-206 723.0 649 59.2
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 3.6e-205 718.8 651 60.4
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 1.1e-203 713.8 672 58.6
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.6e-203 712.6 650 59.8
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 1.7e-202 709.9 650 58.9
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 3.7e-202 708.8 745 54.5
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 5.3e-201 704.9 662 59.5
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.0e-201 704.5 668 57.2
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 1.6e-200 703.4 653 59.0
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.0e-199 700.7 651 57.1
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 2.2e-199 699.5 626 61.3
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.1e-198 697.2 651 57.8
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 3.2e-198 695.7 653 56.0
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 4.2e-198 695.3 649 58.2
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.0e-196 689.1 651 56.8
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.7e-194 682.2 658 56.1
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.1e-193 680.6 617 58.8
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 1.2e-192 677.2 708 53.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 1.5e-190 670.2 650 56.3
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.6e-189 666.8 650 56.2
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 1.8e-188 663.3 652 55.8
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.2e-186 656.4 647 55.6
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 6.3e-186 654.8 650 55.2
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 4.1e-185 652.1 664 53.9
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 5.9e-184 648.3 640 55.5
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.3e-183 647.1 653 54.5
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 1.7e-183 646.7 651 53.9
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.2e-183 646.4 651 54.1
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.6e-181 640.2 651 54.4
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.8e-180 636.7 581 59.7
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 2.3e-180 636.3 650 51.2
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 3.0e-180 636.0 651 51.3
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 6.8e-180 634.8 629 55.2
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 9.8e-179 630.9 651 51.0
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 1.6e-176 623.6 655 52.4
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 3.5e-176 622.5 632 52.1
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 5.0e-175 618.6 651 52.1
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 4.7e-173 612.1 652 52.3
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.3e-172 609.8 653 51.9
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.5e-171 607.1 652 51.8
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 9.8e-171 604.4 652 51.7
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 4.9e-170 602.1 644 51.1
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 8.3e-170 601.3 650 52.5
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.4e-169 599.7 658 51.2
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 2.4e-169 599.7 650 52.5
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 2.7e-168 596.3 655 51.6
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 3.5e-168 595.9 632 53.3
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 5.9e-168 595.1 652 51.4
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.7e-167 593.6 659 50.8
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 2.8e-165 586.3 652 50.8
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 3.6e-165 585.9 652 49.5
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 8.0e-165 584.7 664 50.5
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 4.0e-164 582.4 612 52.9
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 9.8e-163 577.8 596 53.0
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 8.3e-162 574.7 602 52.7
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 3.2e-161 572.8 648 48.3
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 9.2e-161 571.2 653 51.6
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 8.6e-159 564.7 653 49.8
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 8.6e-159 564.7 591 52.8
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 3.1e-156 556.2 618 51.5
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 2.9e-154 549.7 656 48.9
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 5.1e-151 538.9 628 46.5
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.5e-150 537.3 627 49.6
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 3.0e-143 513.1 650 45.4
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 9.3e-137 491.5 649 45.3
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 2.8e-125 453.4 648 42.6
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 2.9e-122 443.4 684 42.5
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.9e-121 440.7 852 35.6
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 3.5e-112 409.8 682 37.1
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.0e-106 391.7 692 36.0
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 2.2e-106 390.6 617 42.9
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 1.8e-103 380.9 390 52.1
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 5.9e-99 365.9 390 51.8
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 1.2e-96 358.2 415 49.4
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 5.7e-94 349.4 655 34.7
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 6.5e-90 335.9 315 55.2
Nitab4.5_0000168g0220 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.5e-89 334.0 430 46.0
Nitab4.5_0003450g0040 Nicotiana tabacum HOM05D005193 ORTHO05D006316 5.5e-89 332.8 369 52.0
CSS0020168 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 4.8e-85 319.7 466 43.8
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 1.6e-83 314.7 671 34.0
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 1.4e-76 291.6 322 52.5
AagrBONN_evm.TU.Sc2ySwM_344.2169 Anthoceros agrestis HOM05D005193 ORTHO05D006316 3.5e-75 287.0 515 36.9
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 9.8e-70 268.9 234 62.0
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 5.4e-60 236.5 375 37.9
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.6e-59 235.0 256 50.4
ATR0585G046 Amborella trichopoda HOM05D005193 ORTHO05D006316 3.8e-58 230.3 332 43.1
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.8e-58 230.3 339 41.9
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 3.4e-46 190.7 177 55.4
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 2.4e-44 184.5 123 73.2
CDE02G4624 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.1e-40 171.4 265 39.2
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 6.2e-40 169.9 171 53.8
Lsat_1_v5_gn_6_67380 Lactuca sativa HOM05D005193 ORTHO05D006316 1.7e-34 151.8 109 65.1
Lsat_1_v5_gn_9_67960 Lactuca sativa HOM05D005193 ORTHO05D006316 1.7e-34 151.8 109 65.1
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.9e-33 148.3 214 39.3
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.8e-31 141.7 178 43.8
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 5.4e-28 130.2 109 59.6
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.0e-26 124.4 142 47.9
Sabra06G0024500 Salix brachista HOM05D005193 ORTHO05D006316 2.8e-24 117.9 84 70.2
Sabra16G0098300 Salix brachista HOM05D005193 ORTHO05D006316 1.8e-23 115.2 82 70.7
CAN.G1219.2 Capsicum annuum HOM05D005193 ORTHO05D006316 9.0e-23 112.8 92 59.8
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 2.6e-22 111.3 198 38.9
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.8e-21 107.5 129 46.5
AagrBONN_evm.TU.Sc2ySwM_362.1473 Anthoceros agrestis HOM05D005193 ORTHO05D006316 1.4e-20 105.5 110 49.1
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.6e-19 102.1 75 65.3
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-17 95.1 113 44.2
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 1.9e-17 95.1 113 44.2
CSS0047254 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.9e-17 95.1 205 35.1
MD16G1253600 Malus domestica HOM05D005193 ORTHO05D006316 1.3e-13 82.4 64 62.5
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 6.7e-10 70.1 61 52.5
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 8.7e-10 69.7 62 54.8
SEGI_10601 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 9.6e-09 66.2 74 39.2
SEGI_24122 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.3e-08 65.9 77 39.0
CDE02G4328 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 8.1e-08 63.2 78 41.0
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 7.6e-06 56.6 52 50.0


User provided reference genes

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