Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc11.56 Carica papaya HOM05D003721 ORTHO05D004303 4.2e-136 488.0 249 100.0
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.0e-36 157.9 104 78.8
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 3.8e-36 156.0 104 77.9
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 1.2e-34 151.0 104 76.0
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 1.6e-34 150.6 104 75.0
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 2.1e-34 150.2 106 77.4
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 2.7e-34 149.8 105 79.0
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 1.0e-33 147.9 105 75.2
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.8e-33 147.1 104 74.0
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.8e-33 147.1 104 74.0
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 2.3e-33 146.7 104 74.0
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 3.0e-33 146.4 104 76.0
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.9e-33 146.0 104 74.0
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 1.1e-32 144.4 104 74.0
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 1.5e-32 144.1 104 74.0
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 1.9e-32 143.7 106 74.5
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.3e-32 142.9 104 73.1
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 4.3e-32 142.5 107 72.0
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 1.3e-31 141.0 106 71.7
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 1.7e-31 140.6 109 72.5
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 2.2e-31 140.2 108 71.3
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 2.2e-31 140.2 106 71.7
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 2.2e-31 140.2 104 73.1
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.7e-31 139.4 109 74.3
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 4.8e-31 139.0 107 70.1
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 2.4e-30 136.7 107 73.8
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 3.1e-30 136.3 109 70.6
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 3.1e-30 136.3 109 70.6
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 3.1e-30 136.3 106 72.6
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.1e-30 136.0 109 73.4
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 4.1e-30 136.0 105 69.5
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 5.3e-30 135.6 106 69.8
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 6.9e-30 135.2 107 70.1
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 6.9e-30 135.2 200 45.0
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 6.9e-30 135.2 109 73.4
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 9.1e-30 134.8 107 68.2
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 9.1e-30 134.8 107 68.2
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 9.1e-30 134.8 107 68.2
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 9.1e-30 134.8 107 68.2
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 9.1e-30 134.8 107 68.2
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 1.2e-29 134.4 107 68.2
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 1.5e-29 134.0 129 58.9
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 1.5e-29 134.0 105 71.4
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 2.0e-29 133.7 109 69.7
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 7.7e-29 131.7 110 70.9
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 7.7e-29 131.7 104 72.1
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 1.0e-28 131.3 108 66.7
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 1.0e-28 131.3 109 71.6
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.0e-28 131.3 109 71.6
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 3.8e-28 129.4 112 66.1
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 5.0e-28 129.0 152 53.3
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 6.5e-28 128.6 107 67.3
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.1e-27 127.9 107 66.4
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.1e-27 127.9 107 66.4
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 1.1e-27 127.9 104 69.2
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 1.9e-27 127.1 105 68.6
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 2.5e-27 126.7 109 65.1
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 2.5e-27 126.7 106 66.0
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 5.5e-27 125.6 105 68.6
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 7.2e-27 125.2 106 66.0
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 7.2e-27 125.2 109 64.2
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 1.2e-26 124.4 110 64.5
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 1.2e-26 124.4 105 68.6
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.6e-26 124.0 107 61.7
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 1.6e-26 124.0 106 69.8
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 1.6e-26 124.0 109 64.2
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 2.1e-26 123.6 108 63.0
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 2.1e-26 123.6 105 67.6
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 2.7e-26 123.2 108 65.7
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 3.6e-26 122.9 112 67.9
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 4.7e-26 122.5 106 66.0
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 4.7e-26 122.5 107 67.3
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 7.9e-26 121.7 106 66.0
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 7.9e-26 121.7 108 65.7
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.0e-25 121.3 108 63.9
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 1.0e-25 121.3 109 62.4
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 2.3e-25 120.2 106 65.1
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 2.3e-25 120.2 105 64.8
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 3.0e-25 119.8 112 61.6
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 3.0e-25 119.8 107 61.7
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 3.0e-25 119.8 109 65.1
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.1e-24 117.9 133 58.6
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 1.5e-24 117.5 171 46.8
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 1.5e-24 117.5 106 65.1
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 2.0e-24 117.1 110 64.5
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 3.3e-24 116.3 112 60.7
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 3.3e-24 116.3 111 62.2
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 5.7e-24 115.5 122 58.2
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 5.7e-24 115.5 110 66.4
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 5.7e-24 115.5 110 63.6
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 7.4e-24 115.2 104 65.4
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 9.7e-24 114.8 104 58.7
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 9.7e-24 114.8 110 66.4
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 1.3e-23 114.4 107 61.7
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 1.7e-23 114.0 107 66.4
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 2.2e-23 113.6 109 65.1
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 4.8e-23 112.5 108 59.3
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 6.3e-23 112.1 195 42.6
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 8.2e-23 111.7 108 59.3
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 1.4e-22 110.9 107 59.8
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 1.4e-22 110.9 110 60.9
Actinidia10079 Actinidia chinensis HOM05D003721 ORTHO05D004303 3.1e-22 109.8 83 71.1
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 9.1e-22 108.2 108 58.3
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 9.1e-22 108.2 107 58.9
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 1.2e-21 107.8 107 61.7
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 1.5e-21 107.5 106 62.3
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 2.6e-21 106.7 117 59.8
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 3.4e-21 106.3 108 57.4
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 3.4e-21 106.3 113 57.5
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 4.5e-21 105.9 160 47.5
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 7.7e-21 105.1 116 58.6
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 7.7e-21 105.1 111 55.9
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 7.7e-21 105.1 109 56.0
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.0e-20 104.8 116 58.6
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 1.0e-20 104.8 104 60.6
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 1.7e-20 104.0 109 56.9
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 2.9e-20 103.2 71 73.2
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 5.0e-20 102.4 107 57.0
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 1.4e-19 100.9 107 54.2
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 3.2e-19 99.8 109 60.6
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 4.2e-19 99.4 109 58.7
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 5.5e-19 99.0 156 44.2
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 5.5e-19 99.0 197 37.6
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 2.1e-18 97.1 142 45.1
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 4.7e-18 95.9 117 52.1
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 1.0e-17 94.7 121 52.1
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 3.0e-17 93.2 119 50.4
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 3.9e-17 92.8 112 50.9
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 5.2e-17 92.4 193 34.7
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 7.4e-16 88.6 107 54.2
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 3.7e-15 86.3 104 48.1
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 1.8e-14 84.0 107 54.2
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.6e-13 80.9 64 65.6
Rhsim05G0209700 Rhododendron simsii HOM05D003721 ORTHO05D004303 1.9e-11 73.9 73 56.2
Rhsim11G0030600 Rhododendron simsii HOM05D003721 ORTHO05D004303 4.2e-11 72.8 73 56.2
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 9.4e-11 71.6 104 47.1
SEGI_39264 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 2.1e-10 70.5 104 42.3
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 1.0e-09 68.2 104 43.3
CBR_g40298 Chara braunii HOM05D003721 ORTHO05D004303 5.2e-09 65.9 104 44.2
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 8.2e-07 58.5 49 69.4
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.1e-06 58.2 34 88.2


User provided reference genes

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