Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 5.1e-116 421.0 201 100.0
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.5e-96 356.3 200 82.5
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 2.0e-96 355.9 202 84.2
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 4.2e-94 348.2 202 81.2
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 4.2e-94 348.2 202 81.2
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 9.4e-94 347.1 202 81.7
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 1.2e-93 346.7 200 80.5
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.6e-93 346.3 201 81.1
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 1.6e-93 346.3 202 79.7
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.1e-93 345.9 202 81.2
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 2.1e-93 345.9 201 79.6
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 2.7e-93 345.5 202 80.2
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.7e-93 345.5 201 79.6
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.7e-93 344.7 202 80.7
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 4.7e-93 344.7 202 80.7
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 4.7e-93 344.7 201 80.6
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 6.1e-93 344.4 200 81.0
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 6.1e-93 344.4 201 80.6
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 7.9e-93 344.0 202 79.2
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.0e-92 343.6 212 76.9
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.3e-92 342.4 199 80.4
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.3e-92 342.4 201 79.1
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 6.7e-92 340.9 202 78.2
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 6.7e-92 340.9 201 80.1
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.1e-91 340.1 202 79.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.5e-91 339.7 200 79.5
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 1.5e-91 339.7 200 79.0
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.5e-91 339.7 200 80.5
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 2.0e-91 339.3 200 79.5
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 3.3e-91 338.6 203 77.8
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 3.3e-91 338.6 202 79.7
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 7.4e-91 337.4 202 78.7
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 7.4e-91 337.4 200 78.5
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 7.4e-91 337.4 202 77.2
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 9.7e-91 337.0 201 78.1
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.7e-90 336.3 203 78.8
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 3.7e-90 335.1 200 78.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.7e-90 335.1 200 79.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 3.7e-90 335.1 202 76.7
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 8.2e-90 334.0 202 77.7
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.4e-89 333.2 203 77.8
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 3.1e-89 332.0 202 76.7
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 5.3e-89 331.3 202 76.2
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 5.3e-89 331.3 202 76.7
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.2e-88 330.1 203 77.8
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.5e-88 329.7 202 77.2
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 2.0e-88 329.3 201 75.6
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 2.0e-88 329.3 202 75.2
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.0e-88 329.3 200 76.0
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 2.0e-88 329.3 203 74.9
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.6e-88 328.9 202 76.2
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.4e-88 328.6 202 76.2
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 4.5e-88 328.2 201 76.1
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.3e-87 326.6 199 76.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.7e-87 326.2 202 75.2
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.7e-87 326.2 202 74.8
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.7e-87 326.2 200 75.5
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.2e-87 325.9 203 76.8
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.9e-87 325.5 200 77.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.9e-87 325.5 202 75.2
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 5.0e-87 324.7 202 76.7
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 5.0e-87 324.7 202 74.8
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 5.0e-87 324.7 202 75.7
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 8.5e-87 323.9 202 73.8
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.1e-86 323.6 202 74.8
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.1e-86 323.6 202 75.7
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-86 323.6 202 75.7
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.4e-86 323.2 202 74.3
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 2.5e-86 322.4 203 71.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.5e-86 322.4 203 72.4
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.5e-86 322.4 202 75.2
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 7.2e-86 320.9 203 71.9
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.2e-85 320.1 200 75.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.6e-85 319.7 203 71.9
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 3.6e-85 318.5 203 71.4
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 6.1e-85 317.8 204 73.0
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 6.1e-85 317.8 203 71.4
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 8.0e-85 317.4 202 72.8
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.8e-84 316.2 202 74.8
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 3.0e-84 315.5 203 71.4
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 3.3e-83 312.0 203 69.0
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 2.8e-82 308.9 201 72.1
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 3.7e-82 308.5 200 72.5
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 4.8e-82 308.1 202 70.3
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 4.8e-82 308.1 198 71.2
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 8.2e-82 307.4 201 72.6
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.4e-81 305.8 189 75.7
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 7.0e-81 304.3 195 71.3
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 9.1e-81 303.9 202 71.3
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.2e-80 303.5 202 71.3
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.6e-80 303.1 202 68.8
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 2.0e-80 302.8 201 71.1
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 2.6e-80 302.4 199 71.4
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 7.7e-80 300.8 201 72.1
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.2e-79 299.3 201 69.2
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 5.0e-79 298.1 187 71.1
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 4.7e-77 291.6 197 69.0
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.4e-76 290.0 198 66.2
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.8e-74 282.3 193 68.4
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 4.5e-72 275.0 201 64.7
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 2.2e-71 272.7 198 64.1
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.9e-70 269.6 198 61.6
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 8.8e-68 260.8 198 60.1
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.7e-63 246.5 198 57.1
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 6.1e-61 238.0 140 78.6
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 7.5e-59 231.1 196 55.6
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.2e-58 229.6 140 77.1
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 3.3e-46 189.1 204 45.1
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.2e-43 180.6 139 62.6
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 9.2e-41 171.0 140 62.1
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.6e-40 170.2 140 62.1
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.6e-38 161.8 93 84.9
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.3e-34 150.6 168 44.0
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.1e-33 147.5 99 69.7
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.1e-33 145.6 93 74.2
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 2.3e-31 139.8 96 63.5
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 5.1e-31 138.7 93 71.0
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.4e-25 120.6 64 78.1
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 2.4e-25 119.8 84 67.9
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 9.2e-25 117.9 73 72.6
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 4.6e-24 115.5 105 61.0
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.5e-22 110.5 143 44.8
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.6e-21 107.1 129 46.5
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 9.9e-11 71.2 43 65.1
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 7.1e-09 65.1 48 54.2


User provided reference genes

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