Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc104.11 Carica papaya HOM05D005131 ORTHO05D006645 1.9e-203 712.2 344 100.0
QL07p027488 Quercus lobata HOM05D005131 ORTHO05D006645 8.9e-161 570.5 303 88.8
Duzib128G0735 Durio zibethinus HOM05D005131 ORTHO05D006645 2.0e-160 569.3 304 88.5
Ciclev10012219m.g Citrus clementina HOM05D005131 ORTHO05D006645 3.4e-160 568.5 303 88.1
CiPaw.10G018800 Carya illinoinensis HOM05D005131 ORTHO05D006645 9.9e-160 567.0 305 87.5
Glyma.19G200600 Glycine max HOM05D005131 ORTHO05D006645 4.9e-159 564.7 303 87.8
Gohir.D09G129600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 4.1e-158 561.6 304 86.8
Gorai.006G148500 Gossypium raimondii HOM05D005131 ORTHO05D006645 4.1e-158 561.6 304 86.8
Atru.chr8.1330 Acer truncatum HOM05D005131 ORTHO05D006645 5.4e-158 561.2 304 86.5
Manes.08G034500 Manihot esculenta HOM05D005131 ORTHO05D006645 1.6e-157 559.7 302 86.4
Nn2g14347 Nelumbo nucifera HOM05D005131 ORTHO05D006645 1.6e-157 559.7 304 86.8
Gohir.A09G133400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 3.5e-157 558.5 304 85.9
Lalb_Chr20g0111311 Lupinus albus HOM05D005131 ORTHO05D006645 3.5e-157 558.5 299 87.6
Thecc.05G106400 Theobroma cacao HOM05D005131 ORTHO05D006645 3.5e-157 558.5 304 87.5
Carub.0005s1875 Capsella rubella HOM05D005131 ORTHO05D006645 4.6e-157 558.1 304 85.9
Potri.016G068400 Populus trichocarpa HOM05D005131 ORTHO05D006645 4.6e-157 558.1 304 85.9
AL5G33050 Arabidopsis lyrata HOM05D005131 ORTHO05D006645 7.8e-157 557.4 303 86.1
Haze_20155 Corylus avellana HOM05D005131 ORTHO05D006645 7.8e-157 557.4 297 89.2
Phvul.001G196500 Phaseolus vulgaris HOM05D005131 ORTHO05D006645 1.0e-156 557.0 299 87.3
Medtr7g106430 Medicago truncatula HOM05D005131 ORTHO05D006645 1.3e-156 556.6 303 86.1
CSS0022283 Camellia sinensis var. sinensis HOM05D005131 ORTHO05D006645 2.3e-156 555.8 304 85.9
Aa31LG10G7440 Aethionema arabicum HOM05D005131 ORTHO05D006645 3.0e-156 555.4 302 86.1
VMungo1383G1979 Vigna mungo HOM05D005131 ORTHO05D006645 3.0e-156 555.4 299 87.0
TPR.G31287 Trifolium pratense HOM05D005131 ORTHO05D006645 5.1e-156 554.7 303 86.1
Manes.09G044500 Manihot esculenta HOM05D005131 ORTHO05D006645 8.6e-156 553.9 301 86.4
AT3G52390 Arabidopsis thaliana HOM05D005131 ORTHO05D006645 1.1e-155 553.5 303 85.5
Thhalv10010578m.g Eutrema salsugineum HOM05D005131 ORTHO05D006645 1.1e-155 553.5 303 85.8
CARHR162160 Cardamine hirsuta HOM05D005131 ORTHO05D006645 2.5e-155 552.4 304 85.5
Ca_09063_v3 Cicer arietinum L. HOM05D005131 ORTHO05D006645 3.3e-155 552.0 303 84.8
BcaB02g08573 Brassica carinata HOM05D005131 ORTHO05D006645 4.3e-155 551.6 303 85.8
Actinidia37756 Actinidia chinensis HOM05D005131 ORTHO05D006645 5.6e-155 551.2 298 86.6
BcaC02g09261 Brassica carinata HOM05D005131 ORTHO05D006645 7.3e-155 550.8 303 85.8
Eucgr.A02573 Eucalyptus grandis HOM05D005131 ORTHO05D006645 9.6e-155 550.4 302 86.4
Sp5g09900 Schrenkiella parvula HOM05D005131 ORTHO05D006645 9.6e-155 550.4 303 85.8
Prupe.7G093300 Prunus persica HOM05D005131 ORTHO05D006645 1.2e-154 550.1 301 86.7
TWI74G0987 Tripterygium wilfordii HOM05D005131 ORTHO05D006645 4.7e-154 548.1 303 85.5
EL10Ac5g11853 Beta vulgaris HOM05D005131 ORTHO05D006645 8.1e-154 547.4 301 85.7
MD12G1041900 Malus domestica HOM05D005131 ORTHO05D006645 1.4e-153 546.6 301 85.7
PGR004G1515 Punica granatum HOM05D005131 ORTHO05D006645 1.4e-153 546.6 300 85.0
Ah.12g059320 Amaranthus hybridus HOM05D005131 ORTHO05D006645 1.8e-153 546.2 301 85.7
BraA04t16401Z Brassica rapa HOM05D005131 ORTHO05D006645 4.0e-153 545.0 311 83.6
GSVIVG01022599001 Vitis vinifera HOM05D005131 ORTHO05D006645 4.0e-153 545.0 304 84.5
CANSAT64G0057 Cannabis sativa HOM05D005131 ORTHO05D006645 6.8e-153 544.3 302 84.8
HanXRQChr13g0398521 Helianthus annuus HOM05D005131 ORTHO05D006645 8.9e-153 543.9 299 83.6
C04p40630 Brassica napus HOM05D005131 ORTHO05D006645 1.2e-152 543.5 311 83.6
A04p07040 Brassica napus HOM05D005131 ORTHO05D006645 1.5e-152 543.1 311 83.3
FvH4_6g20480 Fragaria vesca HOM05D005131 ORTHO05D006645 1.5e-152 543.1 301 84.4
FAN05G1272 Fragaria x ananassa HOM05D005131 ORTHO05D006645 3.4e-152 542.0 300 85.0
BolC4t25644H Brassica oleracea HOM05D005131 ORTHO05D006645 7.6e-152 540.8 311 83.0
vmacro07486 Vaccinium macrocarpon HOM05D005131 ORTHO05D006645 7.6e-152 540.8 304 82.9
MSTRG.5889 Avicennia marina HOM05D005131 ORTHO05D006645 9.9e-152 540.4 299 84.6
Cc06_g06690 Coffea canephora HOM05D005131 ORTHO05D006645 9.9e-152 540.4 304 81.9
CsaV3_3G038080 Cucumis sativus L. HOM05D005131 ORTHO05D006645 9.9e-152 540.4 299 84.9
Lj1g0022682 Lotus japonicus HOM05D005131 ORTHO05D006645 9.9e-152 540.4 299 84.3
ECA233G5535 Erigeron canadensis HOM05D005131 ORTHO05D006645 1.3e-151 540.0 299 82.6
FAN05G3424 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.7e-151 539.7 300 84.7
Aqoxy2G00625 Aquilegia oxysepala HOM05D005131 ORTHO05D006645 4.9e-151 538.1 299 85.3
Haze_20150 Corylus avellana HOM05D005131 ORTHO05D006645 4.9e-151 538.1 298 87.2
Sed0026420 Sechium edule HOM05D005131 ORTHO05D006645 4.9e-151 538.1 299 84.6
THA.LOC104803758 Tarenaya hassleriana HOM05D005131 ORTHO05D006645 4.9e-151 538.1 299 84.9
Sc22g0002890 Simmondsia chinensis HOM05D005131 ORTHO05D006645 1.4e-150 536.6 297 84.2
RcHm_v2.0_Chr3g0476361 Rosa chinensis HOM05D005131 ORTHO05D006645 2.4e-150 535.8 301 83.4
Hund10854 Selenicereus undatus HOM05D005131 ORTHO05D006645 2.4e-150 535.8 302 83.1
Sopen06g002230 Solanum pennellii HOM05D005131 ORTHO05D006645 3.2e-150 535.4 302 83.4
COL.COLO4_29542 Corchorus olitorius HOM05D005131 ORTHO05D006645 5.4e-150 534.6 361 72.9
PGSC0003DMG401020557 Solanum tuberosum HOM05D005131 ORTHO05D006645 5.4e-150 534.6 302 83.4
Solyc06g007310.4 Solanum lycopersicum HOM05D005131 ORTHO05D006645 7.1e-150 534.3 298 83.9
Lsat_1_v5_gn_6_33480 Lactuca sativa HOM05D005131 ORTHO05D006645 9.3e-150 533.9 304 80.3
PSO384G4687 Papaver somniferum HOM05D005131 ORTHO05D006645 9.3e-150 533.9 304 81.2
ClCG10G018240 Citrullus lanatus HOM05D005131 ORTHO05D006645 1.6e-149 533.1 302 84.1
PSO339G6419 Papaver somniferum HOM05D005131 ORTHO05D006645 2.7e-149 532.3 304 81.6
AUR62030719 Chenopodium quinoa HOM05D005131 ORTHO05D006645 1.3e-148 530.0 301 84.4
Migut.J00690 Erythranthe guttata HOM05D005131 ORTHO05D006645 1.3e-148 530.0 298 82.9
DCAR_009180 Daucus carota HOM05D005131 ORTHO05D006645 2.3e-148 529.3 298 82.6
Hund14967 Selenicereus undatus HOM05D005131 ORTHO05D006645 4.0e-145 518.5 299 82.3
Os07g0158200 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 1.0e-140 503.8 297 79.1
Rhsim03G0063800 Rhododendron simsii HOM05D005131 ORTHO05D006645 3.9e-140 501.9 311 77.8
Nitab4.5_0012238g0010 Nicotiana tabacum HOM05D005131 ORTHO05D006645 4.3e-139 498.4 307 78.8
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 9.6e-139 497.3 282 81.9
Zm00001eb117460 Zea mays HOM05D005131 ORTHO05D006645 2.8e-138 495.7 297 78.8
FAN14G5766 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.1e-137 493.8 306 78.1
TAR636G0548 Trochodendron aralioides HOM05D005131 ORTHO05D006645 1.7e-135 486.5 268 85.4
arahy.Tifrunner.gnm1.ann1.X3LXDK Arachis hypogaea HOM05D005131 ORTHO05D006645 8.4e-135 484.2 292 79.5
ATR0697G267 Amborella trichopoda HOM05D005131 ORTHO05D006645 1.2e-133 480.3 281 79.0
SEGI_21507 Sequoiadendron giganteum HOM05D005131 ORTHO05D006645 2.1e-133 479.6 305 72.8
Gohir.A13G054600 Gossypium hirsutum HOM05D005131 ORTHO05D006645 6.0e-133 478.0 253 88.1
CAN.G869.8 Capsicum annuum HOM05D005131 ORTHO05D006645 3.0e-132 475.7 265 84.5
Gohir.A09G012800 Gossypium hirsutum HOM05D005131 ORTHO05D006645 3.0e-132 475.7 253 87.7
Dinv12349 Davidia involucrata HOM05D005131 ORTHO05D006645 5.1e-132 474.9 250 87.6
SHI18412 Sapria himalayana HOM05D005131 ORTHO05D006645 6.7e-132 474.6 297 74.1
Gohir.A05G372400 Gossypium hirsutum HOM05D005131 ORTHO05D006645 4.3e-131 471.9 253 87.7
arahy.Tifrunner.gnm1.ann1.275XDC Arachis hypogaea HOM05D005131 ORTHO05D006645 9.0e-129 464.2 269 82.2
Oeu035639.1 Olea europaea HOM05D005131 ORTHO05D006645 3.8e-127 458.8 254 84.3
Peaxi162Scf00012g02523 Petunia axillaris HOM05D005131 ORTHO05D006645 6.5e-127 458.0 302 74.8
Mapoly0052s0020 Marchantia polymorpha HOM05D005131 ORTHO05D006645 5.5e-126 454.9 298 69.5
FAN02G0570 Fragaria x ananassa HOM05D005131 ORTHO05D006645 1.2e-125 453.8 254 84.6
Hma1.2p1_0079F.1_g041720 Hydrangea macrophylla HOM05D005131 ORTHO05D006645 2.1e-125 453.0 304 73.0
AagrBONN_evm.TU.Sc2ySwM_117.2339 Anthoceros agrestis HOM05D005131 ORTHO05D006645 5.8e-120 434.9 292 68.8
Nitab4.5_0000121g0080 Nicotiana tabacum HOM05D005131 ORTHO05D006645 3.2e-118 429.1 303 72.3
CAN.G741.26 Capsicum annuum HOM05D005131 ORTHO05D006645 1.1e-115 420.6 269 76.2
SMO334G0001 Selaginella moellendorffii HOM05D005131 ORTHO05D006645 1.1e-115 420.6 282 67.7
unitig_26.g9145 Utricularia gibba HOM05D005131 ORTHO05D006645 1.6e-114 416.8 258 77.5
AUR62036353 Chenopodium quinoa HOM05D005131 ORTHO05D006645 7.7e-112 407.9 235 82.6
MSTRG.18896 Avicennia marina HOM05D005131 ORTHO05D006645 9.7e-107 391.0 218 83.5
Pp3c11_16390 Physcomitrium patens HOM05D005131 ORTHO05D006645 1.7e-103 380.2 301 59.5
CBR_g41666 Chara braunii HOM05D005131 ORTHO05D006645 2.2e-98 363.2 302 58.6
MBI12_g38626_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 4.8e-98 362.1 210 81.9
Cre02.g085650 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D006645 1.1e-86 324.3 293 53.9
MCO14G398 Micromonas commoda HOM05D005131 ORTHO05D006645 9.8e-83 311.2 314 49.4
HPP92_012180 Vanilla planifolia HOM05D005131 ORTHO05D006645 5.5e-78 295.4 204 67.6
PRCOL_00003277 Prasinoderma coloniale HOM05D005131 ORTHO05D006645 1.2e-75 287.7 288 46.5
Haze_27322 Corylus avellana HOM05D005131 ORTHO05D006645 1.3e-74 284.3 287 51.9
MELO3C009548.2 Cucumis melo HOM05D000492 ORTHO05D000499 2.8e-74 283.1 154 84.4
HPP92_013927 Vanilla planifolia HOM05D005131 ORTHO05D006645 8.3e-74 281.6 179 74.3
MELO3C031004.2 Cucumis melo HOM05D005131 ORTHO05D006645 5.2e-68 262.3 145 85.5
HPP92_026830 Vanilla planifolia HOM05D005131 ORTHO05D006645 2.6e-67 260.0 165 74.5
CDE09G0133 Ceratophyllum demersum HOM05D005131 ORTHO05D006645 1.5e-62 244.2 154 76.6
Zm00001eb419840 Zea mays HOM05D005131 ORTHO05D006645 1.8e-60 237.3 184 63.6
Lj7A140G6 Lonicera japonica HOM05D005131 ORTHO05D006645 1.4e-57 227.6 182 64.3
Sabra16G0069400 Salix brachista HOM05D005131 ORTHO05D006645 7.3e-54 215.3 119 83.2
HPP92_013928 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.2e-53 214.5 135 74.8
Psat3g205680 Pisum sativum HOM05D005131 ORTHO05D006645 2.8e-53 213.4 115 85.2
Zm00001eb002330 Zea mays HOM05D005131 ORTHO05D006645 1.4e-52 211.1 132 75.0
Cc04_g12370 Coffea canephora HOM05D005131 ORTHO05D006645 2.1e-48 197.2 108 83.3
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 2.6e-43 180.3 124 69.4
MBI12_g38628_MAGBIO Magnolia biondii HOM05D005131 ORTHO05D006645 2.9e-42 176.8 94 88.3
Zm00001eb083350 Zea mays HOM05D005131 ORTHO05D006645 2.7e-40 170.2 118 68.6
arahy.Tifrunner.gnm1.ann1.Y0MH84 Arachis hypogaea HOM05D005131 ORTHO05D006645 2.3e-39 167.2 172 52.9
Zm00001eb324820 Zea mays HOM05D005131 ORTHO05D006645 6.6e-39 165.6 107 72.0
Psat0s6170g0080 Pisum sativum HOM05D005131 ORTHO05D006645 2.1e-32 144.1 95 76.8
Os08g0165800 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 7.8e-32 142.1 319 33.9
Cre03.g169800 Chlamydomonas reinhardtii HOM05D005131 ORTHO05D005943 2.8e-29 133.7 295 34.9
HPP92_012178 Vanilla planifolia HOM05D005131 ORTHO05D006645 1.6e-24 117.9 93 61.3
MD14G1041100 Malus domestica HOM05D005131 ORTHO05D006645 6.0e-24 115.9 303 31.4
Zm00001eb429030 Zea mays HOM05D005131 ORTHO05D006645 2.6e-19 100.5 69 66.7
Zm00001eb324830 Zea mays HOM05D005131 ORTHO05D006645 7.6e-19 99.0 69 66.7
Psat3g205720 Pisum sativum HOM05D005131 ORTHO05D006645 2.4e-17 94.0 55 83.6
Pp3c7_11890 Physcomitrium patens HOM05D005131 ORTHO05D006645 1.6e-16 91.3 93 50.5
Os07g0157900 Oryza sativa ssp. japonica HOM05D005131 ORTHO05D006645 3.5e-16 90.1 106 50.0
Zm00001eb392810 Zea mays HOM05D005131 ORTHO05D006645 1.3e-13 81.6 55 69.1
MCO10G056 Micromonas commoda HOM05D005131 ORTHO05D006645 6.2e-13 79.3 165 29.1
TAR633G0521 Trochodendron aralioides HOM05D005131 ORTHO05D006645 6.2e-13 79.3 78 51.3
A01p30550 Brassica napus HOM05D005131 ORTHO05D033215 3.1e-12 77.0 42 85.7
BraA01t03187Z Brassica rapa HOM05D005131 ORTHO05D033215 3.1e-12 77.0 42 85.7
BolC1t02473H Brassica oleracea HOM05D005131 ORTHO05D033215 6.9e-12 75.9 42 83.3
Zm00001eb073330 Zea mays HOM05D004773 ORTHO05D005943 9.0e-12 75.5 289 26.0
SGA_v2.0_scaffold114G31969 Striga asiatica HOM05D004773 ORTHO05D005943 1.0e-10 72.0 272 26.8
Sabra13G0063900 Salix brachista HOM05D004773 ORTHO05D008759 1.7e-10 71.2 337 26.7
FAN02G0119 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.2e-08 65.1 210 28.1
FAN09G4020 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.2e-08 65.1 210 28.1
FAN09G3809 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.6e-08 64.7 211 28.0
CAN.G1767.1 Capsicum annuum HOM05D000162 ORTHO05D000090 2.7e-08 63.9 78 48.7
Cpa.g.sc73.89 Carica papaya HOM05D004773 ORTHO05D005943 2.7e-08 63.9 225 28.0
FvH4_6g14060 Fragaria vesca HOM05D004773 ORTHO05D005943 3.5e-08 63.5 211 28.0
FAN05G1629 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.5e-08 63.5 211 28.4
FvH4_2g19461 Fragaria vesca HOM05D005131 ORTHO05D006645 6.0e-08 62.8 63 52.4
FvH4_6g13930 Fragaria vesca HOM05D004773 ORTHO05D005943 7.9e-08 62.4 210 27.6
FAN05G3354 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-07 62.0 211 28.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-07 62.0 211 28.4
FAN14G4391 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.0e-07 62.0 211 28.0
FAN02G4326 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.9e-07 60.1 136 33.1
Potri.013G073800 Populus trichocarpa HOM05D004773 ORTHO05D005943 6.7e-07 59.3 202 28.7
FAN09G2979 Fragaria x ananassa HOM05D004773 ORTHO05D005943 8.7e-07 58.9 207 28.0
Sc17g0006500 Simmondsia chinensis HOM05D004773 ORTHO05D005943 1.9e-06 57.8 121 32.2
PRCOL_00005876 Prasinoderma coloniale HOM05D004773 ORTHO05D005943 7.4e-06 55.8 200 25.5


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