Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 3.1e-273 944.5 464 100.0
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.2e-226 788.9 465 84.7
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 2.6e-224 781.9 466 84.3
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 1.7e-223 779.2 466 82.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.5e-223 777.3 466 82.4
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 3.2e-222 775.0 467 81.6
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 5.5e-222 774.2 465 82.4
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 1.2e-221 773.1 465 82.2
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 6.1e-221 770.8 468 82.5
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 6.1e-221 770.8 464 82.5
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 3.8e-215 751.5 475 78.5
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 5.0e-215 751.1 465 79.8
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 1.2e-213 746.5 473 78.9
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 3.6e-213 745.0 465 79.4
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 4.7e-213 744.6 464 78.4
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 7.9e-213 743.8 460 78.0
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 7.9e-213 743.8 468 78.6
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 3.9e-212 741.5 466 77.7
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 6.7e-212 740.7 469 78.3
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.6e-211 738.8 464 76.7
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.4e-209 733.0 464 75.2
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 2.4e-209 732.3 467 77.3
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 5.3e-209 731.1 449 78.8
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 5.9e-208 727.6 471 75.6
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 7.7e-208 727.2 462 75.1
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 2.2e-207 725.7 464 74.4
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 5.0e-207 724.5 469 74.8
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.0e-207 724.5 464 73.7
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 6.5e-207 724.2 464 74.4
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.1e-206 723.4 464 73.7
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.9e-206 722.6 463 76.2
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 3.2e-206 721.8 466 77.0
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 7.2e-206 720.7 448 78.6
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 2.1e-205 719.2 468 76.3
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 3.6e-205 718.4 465 76.1
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 3.6e-205 718.4 464 76.7
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 4.7e-205 718.0 464 73.3
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 6.1e-205 717.6 465 75.3
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 8.0e-205 717.2 464 73.1
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 8.0e-205 717.2 465 76.1
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.8e-204 716.1 465 76.1
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 2.3e-204 715.7 419 80.7
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 5.2e-204 714.5 471 74.5
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 6.7e-204 714.1 463 76.0
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 8.8e-204 713.8 464 75.9
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 8.8e-204 713.8 454 77.3
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.6e-203 712.2 465 74.4
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.3e-203 711.8 466 75.3
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 5.7e-203 711.1 459 76.7
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.3e-202 709.9 467 74.9
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 1.7e-202 709.5 464 75.2
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 2.2e-202 709.1 465 74.6
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 2.2e-202 709.1 466 73.4
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.2e-202 709.1 461 73.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 2.2e-202 709.1 461 73.8
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 2.8e-202 708.8 475 72.2
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 4.1e-201 704.9 465 74.8
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 4.1e-201 704.9 465 74.8
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 9.1e-201 703.7 467 73.7
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 9.1e-201 703.7 463 74.3
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 4.5e-200 701.4 460 74.3
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 4.5e-200 701.4 467 75.2
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 4.5e-200 701.4 454 75.1
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.3e-199 699.9 469 73.8
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 1.7e-199 699.5 474 71.5
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 6.5e-199 697.6 460 73.5
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.1e-198 696.8 469 73.6
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 2.5e-198 695.7 417 80.3
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.6e-197 693.0 510 68.8
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 3.6e-197 691.8 463 74.3
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 9.8e-195 683.7 466 69.7
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 2.8e-194 682.2 465 71.4
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.7e-194 681.8 466 71.5
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 4.8e-194 681.4 463 73.4
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.8e-193 679.5 467 70.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.7e-192 675.6 472 71.0
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 3.5e-192 675.2 486 70.0
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 7.7e-192 674.1 489 69.7
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.8e-191 671.8 467 71.5
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 3.8e-191 671.8 472 70.6
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 5.0e-191 671.4 415 77.1
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 4.2e-190 668.3 396 81.3
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 7.5e-187 657.5 467 69.0
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.6e-182 641.3 407 74.4
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 5.6e-182 641.3 387 80.9
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 6.1e-181 637.9 382 80.6
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 6.8e-172 607.8 412 71.8
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 4.1e-169 598.6 418 65.8
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 1.1e-166 590.5 409 65.8
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 3.4e-163 578.9 409 65.3
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 2.5e-158 562.8 324 85.8
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 3.3e-158 562.4 467 63.8
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 7.6e-147 524.6 349 73.4
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 3.2e-137 492.7 456 57.7
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 5.5e-121 438.7 400 53.2
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 9.6e-118 427.9 411 51.8
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 5.3e-116 422.2 396 54.0
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 5.3e-116 422.2 412 51.5
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.0e-111 407.9 406 50.2
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 1.3e-93 347.8 416 44.0
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.5e-78 297.7 199 72.9
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 4.4e-70 269.6 187 71.7
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 7.3e-65 252.3 208 58.7
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 7.3e-65 252.3 208 58.7
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.0e-54 217.6 193 57.5
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 4.6e-27 126.7 88 70.5
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 2.0e-22 111.3 61 85.2


User provided reference genes

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