Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 7.8e-76 287.0 137 100.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.5e-42 175.6 100 77.0
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 4.1e-40 168.3 100 72.0
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 4.1e-40 168.3 101 71.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 6.9e-40 167.5 100 76.0
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 9.1e-40 167.2 99 77.8
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.5e-39 166.4 99 72.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.5e-39 166.4 102 74.5
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.0e-39 166.0 98 76.5
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.6e-39 165.6 98 73.5
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 2.6e-39 165.6 98 75.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 4.5e-39 164.9 101 74.3
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 4.5e-39 164.9 100 72.0
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.7e-39 164.1 97 74.2
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.7e-39 164.1 97 74.2
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 7.7e-39 164.1 96 79.2
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.3e-38 163.3 98 72.4
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.7e-38 162.9 98 71.4
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 2.2e-38 162.5 95 73.7
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.2e-38 162.5 95 73.7
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 2.9e-38 162.2 126 61.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 6.5e-38 161.0 126 60.3
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.4e-37 159.8 98 70.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 1.9e-37 159.5 97 74.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 3.2e-37 158.7 95 73.7
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 5.5e-37 157.9 126 60.3
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 5.5e-37 157.9 126 60.3
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 5.5e-37 157.9 97 72.2
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 7.2e-37 157.5 102 70.6
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 7.2e-37 157.5 96 71.9
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 9.4e-37 157.1 98 71.4
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.2e-36 156.8 96 74.0
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 1.6e-36 156.4 97 70.1
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.6e-36 156.4 127 58.3
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 2.7e-36 155.6 95 72.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.7e-36 155.6 101 68.3
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 2.7e-36 155.6 100 68.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.7e-36 155.6 97 70.1
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.6e-36 155.2 96 70.8
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 4.7e-36 154.8 126 58.7
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 4.7e-36 154.8 97 70.1
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 7.9e-36 154.1 101 67.3
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 1.0e-35 153.7 104 66.3
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 3.0e-35 152.1 96 69.8
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 3.9e-35 151.8 101 65.3
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 5.1e-35 151.4 138 54.3
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 8.8e-35 150.6 100 67.0
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 1.1e-34 150.2 100 65.0
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.5e-34 149.8 100 66.0
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 3.3e-34 148.7 96 69.8
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 7.4e-34 147.5 98 67.3
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 9.7e-34 147.1 95 69.5
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.3e-33 146.7 96 65.6
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.2e-33 146.0 100 65.0
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 4.8e-33 144.8 123 54.5
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.1e-32 143.7 95 68.4
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.4e-32 143.3 97 63.9
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.4e-32 143.3 120 55.8
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.4e-32 142.5 103 58.3
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 3.1e-32 142.1 95 66.3
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 3.1e-32 142.1 97 64.9
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 3.1e-32 142.1 96 67.7
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 4.1e-32 141.7 103 58.3
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 7.0e-32 141.0 103 58.3
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 9.1e-32 140.6 95 63.2
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.2e-31 140.2 118 55.1
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.5e-31 139.8 97 61.9
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 2.0e-31 139.4 141 48.9
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.6e-31 139.0 96 65.6
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 3.5e-31 138.7 96 65.6
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 4.5e-31 138.3 94 62.8
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 5.9e-31 137.9 103 58.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.9e-30 135.6 97 61.9
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 5.0e-30 134.8 92 64.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.9e-29 132.9 96 63.5
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.2e-29 131.7 123 51.2
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 5.5e-29 131.3 95 61.1
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 7.2e-29 131.0 91 62.6
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.1e-28 127.9 128 48.4
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 2.2e-25 119.4 100 57.0
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 7.0e-24 114.4 72 70.8
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.5e-23 111.7 71 70.4
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.4e-16 90.1 56 69.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 5.3e-16 88.2 61 59.0
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.3e-14 83.6 81 46.9
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 2.9e-14 82.4 82 45.1
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.6e-12 75.5 84 40.5
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 2.2e-09 66.2 44 63.6


User provided reference genes

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