Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc10.10 Carica papaya HOM05D000002 ORTHO05D000047 6.2e-58 227.3 115 100.0
Cpa.g.sc63.36 Carica papaya HOM05D000002 ORTHO05D000047 5.5e-22 107.8 163 41.7
Cpa.g.sc191.10 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-18 94.4 100 52.0
Cpa.g.sc301.4 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-18 94.0 151 38.4
Cpa.g.sc608.3 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-17 90.9 163 34.4
Cpa.g.sc96.23 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-16 89.0 146 39.7
Cpa.g.sc12.50 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-16 88.6 132 40.2
Cpa.g.sc73.41 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-16 87.4 102 43.1
Cpa.g.sc22.53 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-15 86.7 133 39.8
Cpa.g.sc10.7 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-15 86.3 161 37.9
Cpa.g.sc67.87 Carica papaya HOM05D000002 ORTHO05D000047 2.2e-15 85.9 111 48.6
Cpa.g.sc118.36 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-15 85.5 166 33.1
Cpa.g.sc29.27 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-15 84.3 84 50.0
Cpa.g.sc41.73 Carica papaya HOM05D000002 ORTHO05D000047 6.5e-15 84.3 102 50.0
Cpa.g.sc130.28 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-14 83.2 163 35.0
Cpa.g.sc20.50 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-14 82.0 110 41.8
Cpa.g.sc153.13 Carica papaya HOM05D000002 ORTHO05D000047 4.2e-14 81.6 164 32.9
Cpa.g.sc23.134 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-13 79.3 133 38.3
Cpa.g.sc67.4 Carica papaya HOM05D000002 ORTHO05D000047 2.7e-13 79.0 110 40.0
Cpa.g.sc47.72 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-12 77.0 77 57.1
Cpa.g.sc68.34 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-12 77.0 110 39.1
Cpa.g.sc867.1 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-12 77.0 119 37.8
Hma1.2p1_0079F.1_g041630 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-12 77.0 77 46.8
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 112 37.5
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.8e-12 76.3 110 39.1
Cpa.g.sc10.272 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-12 75.5 122 39.3
Cpa.g.sc25.135 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-12 75.5 163 34.4
Cpa.g.sc96.44 Carica papaya HOM05D000002 ORTHO05D000047 3.0e-12 75.5 163 35.0
Cpa.g.sc1639.1 Carica papaya HOM05D000002 ORTHO05D000047 5.1e-12 74.7 124 38.7
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 6.7e-12 74.3 110 39.1
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.8e-12 73.9 110 36.4
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-11 73.2 110 35.5
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-11 73.2 110 35.5
Lj3g0012381 Lotus japonicus HOM05D000002 ORTHO05D000047 2.0e-11 72.8 86 41.9
Cpa.g.sc1241.3 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-11 72.4 50 68.0
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-11 72.4 110 35.5
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.3e-11 71.6 110 35.5
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.7e-11 71.2 108 35.2
Cpa.g.sc176.6 Carica papaya HOM05D000002 ORTHO05D000047 7.4e-11 70.9 110 34.5
Cpa.g.sc11.108 Carica papaya HOM05D000002 ORTHO05D000047 9.7e-11 70.5 48 66.7
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.7e-11 70.5 110 35.5
Cpa.g.sc54.39 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-10 70.1 163 34.4
Hma1.2p1_0935F.1_g238580 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-10 69.3 110 35.5
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-10 68.9 79 40.5
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-10 68.6 110 36.4
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-10 68.6 114 33.3
Cpa.g.sc2.306 Carica papaya HOM05D000002 ORTHO05D000047 4.8e-10 68.2 76 46.1
Lj1g0019835 Lotus japonicus HOM05D000002 ORTHO05D000047 4.8e-10 68.2 110 36.4
Cpa.g.sc31.105 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-10 67.8 46 65.2
Cpa.g.sc67.66 Carica papaya HOM05D000002 ORTHO05D000047 6.3e-10 67.8 47 66.0
Hma1.2p1_1841F.1_g304990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-10 67.8 111 33.3
Cpa.g.sc56.27 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-10 67.4 48 64.6
Cpa.g.sc7.141 Carica papaya HOM05D000002 ORTHO05D000047 8.2e-10 67.4 60 55.0
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.1e-09 67.0 51 60.8
Cpa.g.sc67.42 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 67.0 49 59.2
CSS0023724 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-09 66.2 122 31.1
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 1.8e-09 66.2 51 58.8
Cpa.g.sc126.7 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-09 65.9 47 63.8
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-09 65.9 47 63.8
Cpa.g.sc86.67 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-09 65.9 46 65.2
Eucgr.B01039 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.4e-09 65.9 163 29.4
Cpa.g.sc39.115 Carica papaya HOM05D000002 ORTHO05D000047 3.1e-09 65.5 165 31.5
Cpa.g.sc91.67 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-09 65.1 136 34.6
Cpa.g.sc95.11 Carica papaya HOM05D002228 ORTHO05D002347 4.1e-09 65.1 48 60.4
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 111 32.4
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 111 32.4
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 111 32.4
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 111 32.4
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 111 32.4
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 111 32.4
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.9e-09 64.3 111 32.4
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.9e-09 64.3 111 32.4
Cpa.g.sc272.7 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-09 64.3 118 34.7
Cpa.g.sc7.9 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-09 64.3 95 42.1
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.9e-09 64.3 48 60.4
Cpa.g.sc161.16 Carica papaya HOM05D000002 ORTHO05D000047 9.1e-09 63.9 96 38.5
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.1e-09 63.9 104 34.6
Cpa.g.sc30.156 Carica papaya HOM05D000002 ORTHO05D000047 1.2e-08 63.5 121 33.1
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-08 63.5 111 32.4
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.5e-08 63.2 111 32.4
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-08 62.8 111 31.5
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-08 62.4 111 31.5
CSS0003806 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0004509 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0005779 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0005870 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0006173 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.6e-08 62.4 111 31.5
CSS0008635 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0014620 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0015126 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0024888 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
CSS0033964 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-08 62.4 111 31.5
Cpa.g.sc138.9 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-08 62.4 46 60.9
Cpa.g.sc159.30 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-08 62.4 171 30.4
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.4e-08 62.0 111 31.5
Cpa.g.sc34.189 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-08 62.0 52 50.0
Cpa.g.sc43.142 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-08 62.0 55 50.9
Cpa.g.sc5.114 Carica papaya HOM05D000002 ORTHO05D000047 3.4e-08 62.0 47 61.7
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 3.4e-08 62.0 111 31.5
Cpa.g.sc102.25 Carica papaya HOM05D007148 ORTHO05D009047 4.5e-08 61.6 89 39.3
Cpa.g.sc118.39 Carica papaya HOM05D000002 ORTHO05D000047 4.5e-08 61.6 47 61.7
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.9e-08 61.2 111 31.5
Cpa.g.sc168.5 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-08 60.8 47 57.4
Cpa.g.sc44.107 Carica papaya HOM05D000002 ORTHO05D000047 7.7e-08 60.8 50 56.0
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 60.5 111 30.6
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 60.5 110 30.9
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 60.5 111 30.6
Cpa.g.sc81.61 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-07 60.5 129 35.7
Cpa.g.sc89.20 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-07 60.1 141 32.6
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.3e-07 60.1 146 32.2
Cpa.g.sc5.32 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-07 59.7 46 58.7
Atru.chr11.465 Acer truncatum HOM05D000002 ORTHO05D000047 2.9e-07 58.9 48 58.3
Cpa.g.sc17.60 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-07 58.9 89 38.2
Cpa.g.sc63.40 Carica papaya HOM05D000002 ORTHO05D000047 2.9e-07 58.9 39 64.1
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.9e-07 58.9 50 50.0
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-07 57.8 48 50.0
Cpa.g.sc44.5 Carica papaya HOM05D000002 ORTHO05D000047 8.5e-07 57.4 92 38.0
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.1e-06 57.0 58 43.1
Cpa.g.sc232.2 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-06 57.0 99 41.4
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 56.6 137 29.9
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.4e-06 56.6 137 29.9
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.4e-06 56.6 114 31.6
Cpa.g.sc30.24 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-06 56.2 137 31.4
Hma1.2p1_0421F.1_g149900 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-06 56.2 80 38.8
Cpa.g.sc166.3 Carica papaya HOM05D000002 ORTHO05D000047 2.5e-06 55.8 114 36.0
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.5e-06 55.8 50 54.0
CSS0045320 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.2e-06 55.1 127 29.1
Cpa.g.sc33.192 Carica papaya HOM05D001633 ORTHO05D006978 4.2e-06 55.1 85 40.0
CSS0034843 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.5e-06 54.7 127 29.1
Cpa.g.sc24.62 Carica papaya HOM05D008870 ORTHO05D010906 9.4e-06 53.9 117 34.2
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.4e-06 53.9 107 31.8
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 9.4e-06 53.9 108 29.6


User provided reference genes

Program Settings