Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 4.1e-187 657.9 335 100.0
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 5.5e-139 498.0 338 78.1
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 3.6e-138 495.4 335 77.3
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 2.3e-137 492.7 335 75.5
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 7.4e-136 487.6 338 76.0
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 1.3e-135 486.9 340 76.5
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 2.2e-135 486.1 338 74.6
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 8.2e-135 484.2 338 75.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 1.1e-134 483.8 336 75.0
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.4e-134 483.4 336 75.9
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.5e-133 479.9 338 73.7
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 2.1e-130 469.5 333 75.4
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 3.9e-129 465.3 335 74.6
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 6.7e-129 464.5 338 73.4
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 1.5e-128 463.4 337 73.0
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 3.3e-128 462.2 334 71.9
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 4.4e-128 461.8 336 70.5
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 1.3e-127 460.3 334 72.2
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 2.2e-127 459.5 338 73.4
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 2.8e-127 459.1 336 70.2
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 3.1e-126 455.7 341 72.1
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 5.3e-126 454.9 340 70.0
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 1.5e-125 453.4 336 69.6
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.9e-125 451.4 338 72.8
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 2.9e-124 449.1 340 69.7
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.1e-123 447.2 342 71.3
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.1e-123 447.2 349 70.5
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.4e-123 446.8 338 69.2
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.5e-123 446.0 336 71.1
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 4.2e-123 445.3 334 71.3
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 5.5e-123 444.9 326 69.3
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 9.4e-123 444.1 330 72.1
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 2.1e-122 443.0 335 72.2
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 2.7e-122 442.6 324 71.9
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 3.0e-121 439.1 331 71.3
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 3.0e-121 439.1 333 71.5
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 5.2e-121 438.3 336 71.4
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 6.7e-121 438.0 334 71.6
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 8.8e-121 437.6 344 70.1
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 8.8e-121 437.6 336 71.1
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 2.6e-120 436.0 336 70.8
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 1.7e-119 433.3 333 67.9
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 2.2e-119 433.0 334 68.6
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 4.8e-119 431.8 337 70.0
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 6.3e-119 431.4 332 71.4
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 1.8e-118 429.9 337 66.8
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 3.1e-118 429.1 336 69.9
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 3.1e-118 429.1 339 66.4
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 7.0e-118 427.9 335 66.6
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.1e-118 427.6 333 70.3
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 9.1e-118 427.6 333 70.3
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 4.5e-117 425.2 330 69.1
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 5.9e-117 424.9 330 66.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.7e-117 424.5 339 65.8
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 7.7e-117 424.5 339 65.8
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.2e-116 422.9 332 66.0
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 5.0e-116 421.8 377 63.1
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.1e-115 420.6 278 75.5
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 1.5e-115 420.2 335 65.4
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 2.5e-115 419.5 336 65.5
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 2.5e-115 419.5 334 66.5
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 3.2e-115 419.1 335 65.7
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 4.2e-115 418.7 329 66.0
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 7.2e-115 417.9 339 64.9
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 6.1e-114 414.8 338 65.1
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 8.0e-114 414.5 338 64.5
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 8.0e-114 414.5 338 65.4
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 2.3e-113 412.9 337 67.7
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 6.7e-113 411.4 338 64.2
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 3.3e-112 409.1 308 69.8
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 9.7e-112 407.5 327 66.7
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 2.2e-111 406.4 373 60.9
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 8.2e-111 404.4 340 63.8
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 5.3e-110 401.7 328 64.9
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 2.7e-109 399.4 348 62.6
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.7e-109 397.9 331 65.6
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 1.7e-108 396.7 318 64.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.8e-108 395.6 288 74.7
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.5e-107 392.9 368 58.2
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.4e-105 387.1 273 74.7
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 8.8e-105 384.4 354 58.8
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 8.8e-105 384.4 330 63.9
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 7.5e-104 381.3 336 62.2
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.8e-103 379.4 368 57.1
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 3.1e-102 375.9 286 70.3
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 9.1e-102 374.4 270 68.9
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 3.2e-99 365.9 315 61.6
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 5.5e-99 365.2 287 69.7
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 9.5e-99 364.4 273 72.9
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.2e-98 364.0 276 67.8
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 4.0e-97 359.0 340 58.2
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 2.8e-95 352.8 290 70.0
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 4.9e-95 352.1 318 57.2
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.1e-91 340.9 306 63.1
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.2e-90 337.4 290 62.1
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 2.9e-87 326.2 340 55.0
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 5.4e-86 322.0 260 62.7
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 7.5e-80 301.6 280 57.1
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 9.2e-78 294.7 248 59.3
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 1.0e-76 291.2 263 61.2
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 6.6e-76 288.5 222 73.9
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 9.5e-75 284.6 262 54.6
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.2e-71 273.5 304 50.3
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.1e-65 253.1 219 66.7
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.2e-64 251.1 156 84.0
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 9.9e-64 248.1 252 51.6
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 1.6e-61 240.7 217 57.6
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 1.2e-58 231.1 223 60.5
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 3.6e-58 229.6 223 60.1
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.1e-57 228.0 161 78.3
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 2.4e-46 190.3 152 67.1
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 3.0e-44 183.3 234 46.2
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 3.3e-43 179.9 290 39.7
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 9.6e-43 178.3 201 59.7
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 3.8e-39 166.4 261 36.4
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.5e-19 101.3 80 61.2
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.9e-15 87.0 157 32.5
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.9e-14 84.3 69 55.1
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 4.1e-09 66.6 37 81.1
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 9.1e-09 65.5 98 41.8
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 8.5e-07 58.9 77 49.4


User provided reference genes

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