Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 5.2e-75 284.3 139 100.0
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.6e-68 262.7 140 92.1
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 4.7e-68 261.2 139 90.6
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 4.0e-67 258.1 140 90.0
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 6.6e-54 214.2 125 79.2
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.1e-53 213.4 131 74.8
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.9e-53 212.6 132 73.5
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.3e-53 211.5 129 75.2
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 5.6e-53 211.1 123 78.0
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 9.5e-53 210.3 130 73.8
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.2e-52 209.9 131 74.8
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.6e-52 209.5 130 73.1
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.6e-52 209.5 130 73.1
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 2.1e-52 209.1 130 75.4
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 2.1e-52 209.1 127 78.0
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 2.8e-52 208.8 127 75.6
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.6e-52 208.4 123 77.2
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.1e-52 207.6 130 73.8
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.1e-52 207.6 123 77.2
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 6.1e-52 207.6 123 77.2
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 8.0e-52 207.2 130 75.4
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 8.0e-52 207.2 130 75.4
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 8.0e-52 207.2 131 72.5
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.0e-51 206.8 130 74.6
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.8e-51 206.1 129 73.6
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 1.8e-51 206.1 127 71.7
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 2.3e-51 205.7 132 74.2
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.0e-51 205.3 127 74.0
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 4.0e-51 204.9 130 72.3
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 5.2e-51 204.5 127 74.0
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 5.2e-51 204.5 127 74.8
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 6.8e-51 204.1 130 73.8
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 8.9e-51 203.8 127 74.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 8.9e-51 203.8 130 72.3
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 8.9e-51 203.8 127 73.2
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 2.0e-50 202.6 127 73.2
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.0e-50 202.6 125 73.6
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 3.4e-50 201.8 131 72.5
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 5.7e-50 201.1 130 72.3
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 5.7e-50 201.1 130 72.3
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 7.5e-50 200.7 130 71.5
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 9.8e-50 200.3 124 71.8
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 9.8e-50 200.3 129 75.2
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.3e-49 199.9 129 72.9
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-49 199.9 125 70.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 1.3e-49 199.9 125 70.4
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.7e-49 199.5 130 73.1
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.2e-49 199.1 127 72.4
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 2.2e-49 199.1 132 72.0
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 2.2e-49 199.1 122 75.4
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 3.7e-49 198.4 127 72.4
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 4.9e-49 198.0 130 72.3
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.9e-49 198.0 130 72.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.9e-49 198.0 130 72.3
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 8.3e-49 197.2 130 71.5
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.1e-48 196.8 130 71.5
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 3.2e-48 195.3 125 69.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 4.1e-48 194.9 130 71.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 9.2e-48 193.7 122 68.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 9.2e-48 193.7 130 70.8
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 9.2e-48 193.7 129 69.8
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 1.2e-47 193.4 125 68.8
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.6e-47 193.0 130 71.5
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 2.0e-47 192.6 129 70.5
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 2.0e-47 192.6 129 70.5
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.0e-47 192.6 125 68.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 3.5e-47 191.8 130 69.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 4.6e-47 191.4 130 68.5
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 4.6e-47 191.4 130 70.0
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.6e-47 191.4 123 72.4
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.6e-47 191.4 125 68.0
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 5.9e-47 191.0 129 69.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.3e-46 189.9 130 69.2
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.3e-46 189.9 125 68.0
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.3e-46 189.1 130 68.5
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 2.3e-46 189.1 125 68.0
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 3.0e-46 188.7 131 67.2
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 3.9e-46 188.3 130 68.5
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.6e-46 187.6 119 68.9
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.5e-45 186.4 132 65.9
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 5.2e-43 177.9 123 65.9
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.4e-42 175.3 124 66.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.7e-41 172.9 118 68.6
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 4.9e-41 171.4 127 65.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.7e-38 162.9 156 53.2
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 9.5e-37 157.1 118 61.9
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 2.8e-36 155.6 123 57.7
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-35 153.3 93 75.3
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 4.9e-33 144.8 99 68.7
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 8.3e-33 144.1 120 57.5
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.0e-30 135.6 130 56.2
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 4.3e-29 131.7 123 53.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-28 130.2 122 54.1
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.5e-26 123.2 125 48.8
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.7e-25 118.6 79 69.6
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 4.9e-25 118.2 88 67.0
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 6.2e-20 101.3 126 46.0
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 5.2e-19 98.2 68 66.2
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 4.9e-17 91.7 78 62.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.8e-11 73.2 69 53.6
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 9.3e-08 60.8 104 36.5
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.6e-07 60.1 43 62.8


User provided reference genes

Program Settings