Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 6.6e-142 507.3 244 100.0
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 1.0e-73 280.8 151 89.4
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.5e-72 276.2 224 66.1
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 2.1e-71 273.1 148 88.5
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 1.0e-70 270.8 151 87.4
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 8.8e-70 267.7 172 79.7
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 4.4e-69 265.4 151 86.8
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 9.7e-69 264.2 172 78.5
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 1.3e-68 263.8 151 84.1
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 1.3e-68 263.8 151 84.1
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 2.2e-65 253.1 132 90.2
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 3.2e-64 249.2 134 89.6
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 3.2e-64 249.2 134 89.6
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 3.6e-63 245.7 130 90.0
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 2.3e-62 243.0 137 86.1
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 3.0e-62 242.7 144 80.6
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.0e-61 240.0 129 87.6
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 2.2e-60 236.5 126 88.9
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 6.1e-55 218.4 134 80.6
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 6.1e-55 218.4 135 79.3
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 6.5e-49 198.4 150 68.7
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 6.5e-49 198.4 150 68.7
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 5.2e-46 188.7 135 71.9
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 5.7e-45 185.3 115 79.1
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 7.5e-45 184.9 147 66.0
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 7.5e-45 184.9 107 82.2
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 1.1e-43 181.0 99 84.8
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 9.1e-43 177.9 144 66.7
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 9.5e-40 167.9 115 73.9
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 8.0e-39 164.9 94 84.0
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 6.8e-38 161.8 88 86.4
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 1.5e-37 160.6 99 78.8
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 2.0e-37 160.2 88 85.2
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 9.5e-32 141.4 87 75.9
arahy.Tifrunner.gnm1.ann1.2DSY3L Arachis hypogaea HOM05D005210 ORTHO05D010286 5.4e-27 125.6 65 89.2
TPR.G28261 Trifolium pratense HOM05D005210 ORTHO05D010286 4.6e-26 122.5 65 90.8
Lsat_1_v5_gn_0_34981 Lactuca sativa HOM05D005210 ORTHO05D010286 1.3e-25 120.9 62 90.3
ECA039G0011 Erigeron canadensis HOM05D005210 ORTHO05D010286 1.7e-25 120.6 130 57.7
Glyma.12G155200 Glycine max HOM05D005210 ORTHO05D010286 2.5e-24 116.7 65 87.7
Oeu002130.1 Olea europaea HOM05D005210 ORTHO05D010286 4.4e-21 105.9 101 59.4
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 1.7e-20 104.0 95 58.9
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 4.9e-20 102.4 62 80.6
TPR.G24723 Trifolium pratense HOM05D005210 ORTHO05D010286 2.4e-19 100.1 107 53.3
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 4.3e-16 89.4 53 81.1
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 1.2e-15 87.8 66 69.7
FAN01G1368 Fragaria x ananassa HOM05D005210 ORTHO05D010286 6.2e-15 85.5 66 71.2
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 3.1e-14 83.2 115 46.1
SHI11895 Sapria himalayana HOM05D005210 ORTHO05D010286 1.4e-11 74.3 62 62.9
ATR0730G072 Amborella trichopoda HOM05D005210 ORTHO05D010286 1.6e-10 70.9 51 70.6
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 1.1e-08 64.7 41 73.2
Nn117s43415 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.4e-06 57.8 59 54.2
Nn1g10110 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.4e-06 57.8 59 54.2
Nn1g10192 Nelumbo nucifera HOM05D008814 ORTHO05D010812 1.4e-06 57.8 59 54.2


User provided reference genes

Program Settings