Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 5.1e-165 584.3 295 100.0
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.6e-158 562.8 295 95.9
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 5.7e-140 501.1 295 86.4
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.1e-138 496.9 296 86.1
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.6e-126 456.4 294 76.2
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 6.3e-123 444.5 293 75.8
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.1e-122 441.8 295 75.3
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 5.4e-122 441.4 295 74.9
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.4e-122 441.4 291 74.9
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 7.0e-122 441.0 277 78.7
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.2e-121 440.3 276 78.6
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.6e-121 439.9 294 73.5
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.6e-121 439.9 293 75.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.6e-121 439.9 293 75.1
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 2.7e-121 439.1 295 74.6
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.7e-121 439.1 291 75.3
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 7.7e-121 437.6 295 73.2
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 6.6e-120 434.5 276 77.2
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 6.6e-120 434.5 279 75.6
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.5e-119 433.3 295 74.2
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 5.5e-119 431.4 293 73.0
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.6e-118 429.9 293 74.4
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 4.7e-118 428.3 282 74.8
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 8.0e-118 427.6 289 72.7
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 8.0e-118 427.6 291 72.9
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.0e-117 427.2 293 73.0
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.4e-117 426.8 293 72.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.8e-117 426.4 295 71.9
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.0e-117 425.6 304 71.7
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 4.0e-117 425.2 303 71.6
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.2e-117 424.9 279 74.9
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.2e-116 423.7 294 72.4
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-116 423.7 294 73.5
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.5e-116 423.3 306 70.6
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.0e-116 422.9 295 71.5
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 2.0e-116 422.9 294 72.4
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.6e-116 422.5 304 71.1
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 5.7e-116 421.4 295 71.5
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 5.7e-116 421.4 296 71.6
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 7.5e-116 421.0 294 72.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 7.5e-116 421.0 293 72.0
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.3e-115 420.2 295 70.8
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.3e-115 420.2 280 76.4
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.3e-115 420.2 296 72.3
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.7e-115 419.9 295 72.2
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 3.7e-115 418.7 303 69.0
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 4.9e-115 418.3 291 71.8
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 6.3e-115 417.9 296 70.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 6.3e-115 417.9 277 73.3
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.1e-114 417.2 295 71.9
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 1.4e-114 416.8 297 71.4
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.8e-114 416.4 371 60.1
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 3.1e-114 415.6 292 73.3
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 5.4e-114 414.8 292 72.6
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 7.0e-114 414.5 279 72.4
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 1.2e-113 413.7 281 75.1
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.6e-113 413.3 280 72.5
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.6e-113 413.3 300 69.7
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.0e-113 412.9 308 68.5
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.9e-113 411.4 293 72.4
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.9e-113 411.4 293 71.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 7.8e-113 411.0 281 74.0
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 7.8e-113 411.0 292 71.9
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.0e-112 410.6 278 73.7
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.7e-112 409.8 217 94.9
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 5.0e-112 408.3 278 75.5
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 8.6e-112 407.5 294 69.7
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.1e-111 407.1 292 72.9
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.3e-111 405.2 296 69.9
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 5.6e-111 404.8 294 70.4
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 5.6e-111 404.8 292 70.9
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 5.6e-111 404.8 293 68.6
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 5.6e-111 404.8 311 66.9
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 2.1e-110 402.9 292 69.9
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.8e-110 402.5 284 72.9
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 8.0e-110 401.0 317 66.2
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 8.0e-110 401.0 278 74.8
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.8e-109 399.8 301 66.4
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.8e-109 399.8 298 68.8
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.2e-109 398.3 296 67.2
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.0e-108 396.4 297 69.0
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.3e-107 393.7 293 69.3
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.7e-107 393.3 293 68.6
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.2e-107 392.9 293 69.3
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-107 392.1 293 68.9
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.7e-107 392.1 293 68.9
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 3.7e-107 392.1 293 68.6
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 8.3e-107 391.0 293 68.3
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 3.2e-106 389.0 272 73.2
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 4.1e-106 388.7 293 67.6
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.0e-105 386.3 293 64.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.3e-104 382.9 274 69.0
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.9e-103 379.8 281 68.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 3.3e-103 379.0 433 50.8
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 7.3e-103 377.9 297 64.6
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 1.6e-102 376.7 294 65.6
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.4e-98 363.6 298 63.8
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.9e-98 363.2 254 73.6
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.6e-97 358.6 285 66.0
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.3e-96 356.3 279 62.4
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 5.1e-96 355.1 279 62.7
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 1.5e-92 343.6 269 66.5
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.5e-92 343.6 245 70.2
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.4e-90 337.0 283 64.7
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 9.5e-87 324.3 257 66.1
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 6.2e-86 321.6 278 63.3
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.8e-84 315.1 209 75.6
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.4e-82 310.5 204 75.5
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 1.1e-79 300.8 258 60.1
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 7.3e-79 298.1 284 55.3
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.1e-77 294.3 277 56.0
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 1.8e-77 293.5 275 58.5
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.4e-76 289.3 277 55.6
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 8.4e-75 284.6 286 53.5
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.6e-73 278.9 273 52.0
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 9.6e-71 271.2 273 51.3
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.0e-69 265.8 277 49.8
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-67 260.8 253 60.1
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 3.0e-64 249.6 275 49.5
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 3.3e-63 246.1 166 71.7
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.6e-63 245.4 268 49.6
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.3e-61 238.8 271 49.4
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 2.0e-60 236.9 163 71.2
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 3.4e-60 236.1 272 48.2
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 2.7e-57 226.5 163 68.7
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 4.0e-53 212.6 214 57.0
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 4.0e-53 212.6 154 74.7
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.2e-52 211.1 288 49.3
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.7e-39 164.9 117 70.1
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 5.3e-37 159.1 144 58.3
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.4e-34 151.0 133 57.9
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.3e-22 109.0 96 56.2
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 7.7e-20 102.1 130 46.9
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 3.4e-15 86.7 241 36.1
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 6.1e-09 65.9 51 56.9
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.4e-08 64.7 178 37.1


User provided reference genes

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