Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.4e-162 576.2 300 100.0
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 5.6e-127 458.0 301 82.4
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 3.9e-112 408.7 268 82.5
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 4.8e-94 348.6 299 66.2
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 1.1e-93 347.4 302 64.9
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 1.4e-93 347.1 302 64.9
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 2.4e-93 346.3 312 65.7
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.3e-93 345.1 306 63.1
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 5.3e-93 345.1 315 67.6
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 6.9e-93 344.7 303 63.7
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 1.2e-92 344.0 306 62.7
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 3.4e-92 342.4 301 63.5
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 4.5e-92 342.0 304 62.8
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 1.3e-91 340.5 303 63.7
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 1.4e-90 337.0 300 63.3
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 7.2e-90 334.7 320 60.9
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 9.4e-90 334.3 310 64.5
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 2.1e-89 333.2 321 64.2
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 4.7e-89 332.0 258 67.4
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.0e-87 326.6 306 63.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 4.4e-87 325.5 305 62.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 9.7e-87 324.3 309 61.2
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 1.3e-86 323.9 311 61.7
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 2.2e-86 323.2 290 64.5
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.8e-86 322.8 292 61.0
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.8e-86 322.8 294 60.9
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 3.7e-86 322.4 304 59.5
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 3.7e-86 322.4 309 60.2
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.8e-86 322.0 315 61.3
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 6.3e-86 321.6 301 59.8
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.8e-85 320.1 315 60.3
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 3.1e-85 319.3 297 61.6
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 3.1e-85 319.3 310 59.4
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 7.0e-85 318.2 263 65.0
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 1.6e-84 317.0 300 59.7
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.6e-84 317.0 307 59.0
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 2.6e-84 316.2 314 58.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 3.5e-84 315.8 302 59.6
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 3.5e-84 315.8 302 59.6
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 3.5e-84 315.8 307 58.0
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.3e-83 313.9 307 59.6
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 1.7e-83 313.5 307 59.3
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 1.7e-83 313.5 307 59.3
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.7e-83 313.5 309 58.3
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.2e-83 313.2 305 59.7
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.9e-83 312.8 303 62.0
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 3.8e-83 312.4 294 61.2
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 1.1e-82 310.8 281 61.2
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.9e-82 310.1 306 58.5
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.5e-82 309.7 303 56.4
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.2e-81 307.4 266 64.7
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.2e-81 307.4 306 58.5
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 1.6e-81 307.0 309 57.9
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 1.6e-81 307.0 262 62.6
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 3.6e-81 305.8 303 58.4
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 4.7e-81 305.4 261 62.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.8e-80 303.5 301 59.1
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 5.2e-80 302.0 309 58.9
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 4.4e-79 298.9 316 59.2
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 9.7e-79 297.7 301 58.5
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.3e-78 297.4 254 64.2
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.7e-78 297.0 308 60.1
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.7e-78 297.0 299 58.9
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.7e-78 297.0 303 60.7
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.2e-78 296.6 318 55.3
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.8e-78 296.2 318 55.7
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 3.7e-78 295.8 308 54.9
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.3e-78 295.0 303 57.4
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 8.2e-78 294.7 254 62.6
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.1e-77 294.3 304 57.9
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 3.1e-77 292.7 214 70.6
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.1e-77 292.7 316 56.0
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.1e-77 292.4 319 55.5
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 2.0e-76 290.0 294 59.5
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.5e-76 289.3 266 62.4
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.0e-75 287.7 325 56.6
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.7e-75 287.0 303 56.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 5.0e-75 285.4 260 61.5
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 2.5e-74 283.1 239 66.5
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 3.2e-74 282.7 345 52.2
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 1.0e-72 277.7 334 53.0
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 2.8e-70 269.6 315 51.4
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.7e-70 269.2 228 61.8
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 6.3e-70 268.5 215 68.8
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 1.1e-69 267.7 307 54.4
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 3.1e-69 266.2 315 53.0
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 7.0e-69 265.0 288 54.5
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.5e-66 257.3 240 62.9
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 1.0e-64 251.1 229 61.6
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.3e-64 250.0 276 53.6
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 3.0e-64 249.6 284 49.6
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 1.2e-60 237.7 260 52.7
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 5.9e-60 235.3 281 52.7
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 1.7e-59 233.8 188 69.7
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.0e-56 224.6 248 56.9
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.0e-56 224.6 225 57.8
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 2.8e-49 199.9 150 70.7
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 1.2e-44 184.5 232 47.0
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 1.9e-42 177.2 135 71.9
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 3.3e-42 176.4 246 42.7
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 9.2e-37 158.3 235 42.1
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 1.0e-35 154.8 191 51.3
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.5e-34 151.0 114 71.1
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.3e-34 149.8 120 69.2
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.1e-33 147.1 120 68.3
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 8.9e-32 141.7 131 63.4
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 4.4e-31 139.4 234 38.5
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 7.6e-31 138.7 120 60.0
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 4.6e-28 129.4 123 57.7
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 6.6e-27 125.6 217 39.2
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 8.6e-27 125.2 117 59.0
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.2e-25 121.3 215 40.0
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.4e-24 117.9 107 60.7
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.4e-24 117.1 241 38.2
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.5e-23 114.4 112 53.6
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 2.9e-22 110.2 108 60.2
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 3.0e-19 100.1 79 68.4
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 9.6e-10 68.6 46 71.7
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.8e-09 67.0 115 42.6
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.3e-08 62.8 68 52.9
FAN16G0199 Fragaria x ananassa HOM05D000780 ORTHO05D210745 8.4e-06 55.5 92 41.3


User provided reference genes

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