Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10031355m.g Citrus clementina HOM05D007982 ORTHO05D010255 6.7e-279 963.4 488 100.0
Cfa018656 Carpinus fangiana HOM05D007982 ORTHO05D010255 5.7e-177 624.8 467 68.5
COL.COLO4_02959 Corchorus olitorius HOM05D007982 ORTHO05D010255 1.8e-175 619.8 467 66.6
QL01p000856 Quercus lobata HOM05D007982 ORTHO05D010255 2.6e-174 615.9 481 66.7
Thecc.02G154200 Theobroma cacao HOM05D007982 ORTHO05D010255 1.3e-173 613.6 467 67.2
CSS0047094 Camellia sinensis var. sinensis HOM05D007982 ORTHO05D010255 3.2e-172 609.0 488 65.2
Hma1.2p1_0044F.1_g026360 Hydrangea macrophylla HOM05D007982 ORTHO05D010255 1.5e-166 590.1 501 61.3
PGR142G3837 Punica granatum HOM05D007982 ORTHO05D010255 3.4e-166 589.0 460 64.8
Prupe.1G349600 Prunus persica HOM05D007982 ORTHO05D010255 4.5e-166 588.6 473 66.0
RhsimUnG0103100 Rhododendron simsii HOM05D007982 ORTHO05D010255 1.3e-165 587.0 461 65.1
Dinv07497 Davidia involucrata HOM05D007982 ORTHO05D010255 1.2e-163 580.5 449 67.0
MD13G1002800 Malus domestica HOM05D007982 ORTHO05D010255 1.2e-163 580.5 489 62.2
GSVIVG01034385001 Vitis vinifera HOM05D007982 ORTHO05D010255 1.0e-162 577.4 464 65.9
Nn4g25166 Nelumbo nucifera HOM05D007982 ORTHO05D010255 3.0e-162 575.9 465 63.2
Gohir.A12G132500 Gossypium hirsutum HOM05D007982 ORTHO05D010255 9.1e-159 564.3 481 60.7
Gohir.D12G136100 Gossypium hirsutum HOM05D007982 ORTHO05D010255 7.7e-158 561.2 481 60.3
Gorai.008G147300 Gossypium raimondii HOM05D007982 ORTHO05D010255 2.9e-157 559.3 481 60.1
Solyc04g008880.4 Solanum lycopersicum HOM05D007982 ORTHO05D010255 9.4e-156 554.3 473 59.8
Sopen04g004060 Solanum pennellii HOM05D007982 ORTHO05D010255 3.6e-155 552.4 473 59.6
Peaxi162Scf00681g00437 Petunia axillaris HOM05D007982 ORTHO05D010255 2.0e-153 546.6 465 59.4
PGSC0003DMG400025302 Solanum tuberosum HOM05D007982 ORTHO05D010255 9.7e-153 544.3 473 58.8
Nitab4.5_0003038g0010 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.2e-152 543.1 471 59.7
Nitab4.5_0001379g0110 Nicotiana tabacum HOM05D007982 ORTHO05D010255 2.8e-152 542.7 473 59.0
Aqoxy3G04317 Aquilegia oxysepala HOM05D007982 ORTHO05D010255 5.3e-151 538.5 476 58.2
MBI06_g27478_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.1e-151 537.7 479 58.5
Migut.E00677 Erythranthe guttata HOM05D007982 ORTHO05D010255 3.5e-150 535.8 466 59.7
CANSAT78G2255 Cannabis sativa HOM05D007982 ORTHO05D010255 3.8e-149 532.3 416 65.9
Haze_17412 Corylus avellana HOM05D007982 ORTHO05D010255 2.1e-139 500.0 467 58.2
Atru.chr11.1247 Acer truncatum HOM05D007982 ORTHO05D010255 4.7e-123 445.7 269 77.7
HPP92_015183 Vanilla planifolia HOM05D007982 ORTHO05D010255 3.0e-122 443.0 479 51.8
Actinidia04353 Actinidia chinensis HOM05D007982 ORTHO05D010255 5.2e-114 415.6 339 64.0
SMO259G0034 Selaginella moellendorffii HOM05D007982 ORTHO05D010255 1.1e-106 391.3 462 46.5
Pp3c22_18880 Physcomitrium patens HOM05D007982 ORTHO05D010255 2.2e-104 383.6 490 45.1
Mapoly0001s0484 Marchantia polymorpha HOM05D007982 ORTHO05D010255 7.3e-100 368.6 511 40.9
Cpa.g.c40876 Carica papaya HOM05D007982 ORTHO05D010255 6.4e-88 328.9 263 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2345 Anthoceros agrestis HOM05D007982 ORTHO05D010255 1.1e-87 328.2 401 46.9
Oeu027929.1 Olea europaea HOM05D007982 ORTHO05D010255 4.8e-83 312.8 442 44.3
Atru.chr11.1266 Acer truncatum HOM05D007982 ORTHO05D010255 2.7e-70 270.4 220 68.6
FAN17G1590 Fragaria x ananassa HOM05D007982 ORTHO05D010255 3.5e-62 243.4 319 50.8
MBI14_g28586_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.4e-60 235.7 233 57.1
SalBow2G1914 Salvia bowleyana HOM05D007982 ORTHO05D010255 8.5e-56 222.2 214 55.6
MBI17_g03293_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.2e-55 220.3 184 63.0
SEGI_18232 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.2e-55 220.3 244 47.1
SEGI_24738 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 3.2e-55 220.3 244 47.1
Cpa.g.sc138.6 Carica papaya HOM05D007982 ORTHO05D010255 2.3e-53 214.2 185 62.2
MBI09_g17621_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.7e-52 208.8 178 61.2
MBI19_g41559_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.7e-52 208.8 178 60.7
MBI09_g40719_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 6.9e-50 202.6 178 60.1
FvH4_4g37200 Fragaria vesca HOM05D007982 ORTHO05D010255 2.0e-49 201.1 264 49.2
PRCOL_00006233 Prasinoderma coloniale HOM05D007982 ORTHO05D010255 5.9e-49 199.5 503 32.0
MBI05_g11582_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.3e-48 198.4 170 61.2
FAN12G3848 Fragaria x ananassa HOM05D007982 ORTHO05D010255 8.5e-48 195.7 177 62.1
MBI14_g39939_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.2e-47 193.7 177 59.3
MBI04_g26113_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 3.0e-45 187.2 163 59.5
SEGI_11934 Sequoiadendron giganteum HOM05D007982 ORTHO05D010255 9.1e-42 175.6 240 43.3
Gohir.D13G112900 Gossypium hirsutum HOM05D007982 ORTHO05D010255 3.8e-40 170.2 159 57.2
MBI18_g19089_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.9e-39 167.9 177 52.0
MBI18_g03299_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 7.9e-38 162.5 138 58.7
MBI18_g45738_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 1.8e-37 161.4 138 58.0
MBI09_g45432_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 9.1e-34 149.1 121 62.8
Gohir.D03G023166 Gossypium hirsutum HOM05D007982 ORTHO05D010255 1.7e-27 128.3 113 61.1
Gorai.003G023800 Gossypium raimondii HOM05D007982 ORTHO05D010255 6.3e-27 126.3 113 59.3
Pp3s92_70 Physcomitrium patens HOM05D007982 ORTHO05D034158 4.7e-22 110.2 356 27.8
MBI06_g30604_MAGBIO Magnolia biondii HOM05D007982 ORTHO05D010255 4.4e-20 103.6 128 45.3
Gohir.D06G142033 Gossypium hirsutum HOM05D007982 ORTHO05D010255 7.5e-20 102.8 82 62.2
Cpa.g.sc138.10 Carica papaya HOM05D007982 ORTHO05D010255 3.7e-19 100.5 299 30.8
Cpa.g.sc138.4 Carica papaya HOM05D007982 ORTHO05D010255 7.7e-17 92.8 75 60.0
Nitab4.5_0003088g0030 Nicotiana tabacum HOM05D007982 ORTHO05D010293 7.2e-15 86.3 194 32.5
Nitab4.5_0000082g0440 Nicotiana tabacum HOM05D003015 ORTHO05D003733 2.3e-13 81.3 101 41.6
Nitab4.5_0001462g0020 Nicotiana tabacum HOM05D007982 ORTHO05D010255 1.7e-11 75.1 167 34.7
Gorai.010G165700 Gossypium raimondii HOM05D000288 ORTHO05D000173 2.2e-11 74.7 65 56.9
FAN12G3608 Fragaria x ananassa HOM05D007982 ORTHO05D010255 1.4e-10 72.0 151 35.1
Nitab4.5_0001269g0080 Nicotiana tabacum HOM05D009415 ORTHO05D008933 1.2e-09 68.9 80 41.2
Nitab4.5_0001462g0030 Nicotiana tabacum HOM05D007982 ORTHO05D286115 5.9e-09 66.6 109 43.1
Nitab4.5_0014613g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.9e-08 64.3 80 38.8
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 1.6e-06 58.5 374 25.4
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 2.8e-06 57.8 280 26.1


User provided reference genes

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