Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10029727m.g Citrus clementina HOM05D010029 ORTHO05D012401 1.0e-35 152.9 78 100.0
COL.COLO4_18301 Corchorus olitorius HOM05D010029 ORTHO05D012401 2.3e-11 72.0 83 49.4
Duzib168G0349 Durio zibethinus HOM05D010029 ORTHO05D012401 2.3e-11 72.0 80 51.2
Manes.04G017800 Manihot esculenta HOM05D010029 ORTHO05D012401 1.2e-09 66.2 72 54.2
Sabra04G0143900 Salix brachista HOM05D010029 ORTHO05D012401 3.6e-09 64.7 69 52.2
Potri.004G212900 Populus trichocarpa HOM05D010029 ORTHO05D012401 1.8e-08 62.4 67 55.2
FAN16G2941 Fragaria x ananassa HOM05D020266 ORTHO05D022732 5.2e-08 60.8 76 48.7
Thecc.09G344700 Theobroma cacao HOM05D010029 ORTHO05D012401 5.2e-08 60.8 88 47.7
Rhsim13G0096900 Rhododendron simsii HOM05D010029 ORTHO05D012401 6.8e-08 60.5 81 48.1
FAN25G2649 Fragaria x ananassa HOM05D020266 ORTHO05D022732 1.2e-07 59.7 76 48.7
RcHm_v2.0_Chr5g0058381 Rosa chinensis HOM05D020266 ORTHO05D022732 1.2e-07 59.7 72 47.2
QL01p021202 Quercus lobata HOM05D010029 ORTHO05D012401 1.5e-07 59.3 64 50.0
CSS0021738 Camellia sinensis var. sinensis HOM05D010029 ORTHO05D012401 2.6e-07 58.5 76 51.3
Dinv32712 Davidia involucrata HOM05D010029 ORTHO05D012401 7.5e-07 57.0 68 48.5
Duzib150G0882 Durio zibethinus HOM05D010029 ORTHO05D012401 7.5e-07 57.0 87 43.7
Actinidia24119 Actinidia chinensis HOM05D000225 ORTHO05D009781 9.8e-07 56.6 72 48.6
Gohir.D03G136400 Gossypium hirsutum HOM05D010029 ORTHO05D012401 1.3e-06 56.2 86 43.0
Gorai.003G143500 Gossypium raimondii HOM05D010029 ORTHO05D012401 2.2e-06 55.5 84 44.0
TAR633G0101 Trochodendron aralioides HOM05D023791 ORTHO05D026709 4.9e-06 54.3 83 42.2


User provided reference genes

Program Settings