Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10015263m.g Citrus clementina HOM05D004664 ORTHO05D005526 2.5e-248 861.7 442 100.0
Atru.chr1.2210 Acer truncatum HOM05D004664 ORTHO05D005526 9.1e-166 587.4 441 67.8
CiPaw.05G165700 Carya illinoinensis HOM05D004664 ORTHO05D005526 1.5e-144 516.9 473 59.0
Gohir.D05G311400 Gossypium hirsutum HOM05D004664 ORTHO05D005526 3.4e-144 515.8 464 57.5
Gorai.009G332500 Gossypium raimondii HOM05D004664 ORTHO05D005526 9.7e-144 514.2 458 57.9
Gohir.A05G310600 Gossypium hirsutum HOM05D004664 ORTHO05D005526 2.8e-143 512.7 464 57.5
TAR636G0408 Trochodendron aralioides HOM05D004664 ORTHO05D005526 1.8e-142 510.0 469 57.8
QL05p066226 Quercus lobata HOM05D004664 ORTHO05D005526 3.1e-142 509.2 460 59.3
Duzib268G1219 Durio zibethinus HOM05D004664 ORTHO05D005526 1.6e-141 506.9 464 57.5
Dinv11048 Davidia involucrata HOM05D004664 ORTHO05D005526 4.5e-141 505.4 467 57.6
TWI63G0464 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 4.5e-141 505.4 468 57.7
Haze_07058 Corylus avellana HOM05D004664 ORTHO05D005526 2.2e-140 503.1 450 62.2
TWI38G1364 Tripterygium wilfordii HOM05D004664 ORTHO05D005526 6.5e-140 501.5 498 55.8
Thecc.08G197000 Theobroma cacao HOM05D004664 ORTHO05D005526 8.5e-140 501.1 460 57.6
Dinv01695 Davidia involucrata HOM05D004664 ORTHO05D005526 7.2e-139 498.0 467 56.5
COL.COLO4_20401 Corchorus olitorius HOM05D004664 ORTHO05D005526 1.2e-138 497.3 458 55.9
Prupe.3G183500 Prunus persica HOM05D004664 ORTHO05D005526 1.2e-138 497.3 437 57.9
TAR633G0600 Trochodendron aralioides HOM05D004664 ORTHO05D005526 9.8e-136 487.6 464 55.6
Potri.015G143000 Populus trichocarpa HOM05D004664 ORTHO05D005526 3.1e-134 482.6 470 54.0
Hma1.2p1_0277F.1_g111600 Hydrangea macrophylla HOM05D004664 ORTHO05D005526 2.7e-133 479.6 446 56.7
arahy.Tifrunner.gnm1.ann1.6YF458 Arachis hypogaea HOM05D004664 ORTHO05D005526 5.9e-133 478.4 435 56.8
arahy.Tifrunner.gnm1.ann1.U25ASJ Arachis hypogaea HOM05D004664 ORTHO05D005526 1.7e-132 476.9 435 56.6
Manes.08G015000 Manihot esculenta HOM05D004664 ORTHO05D005526 6.6e-132 474.9 485 55.9
Cpa.g.sc27.187 Carica papaya HOM05D004664 ORTHO05D005526 8.6e-132 474.6 468 53.4
Lj6g0004292 Lotus japonicus HOM05D004664 ORTHO05D005526 2.5e-131 473.0 431 56.8
PSO675G1009 Papaver somniferum HOM05D004664 ORTHO05D005526 6.1e-130 468.4 480 52.3
PSO541G3178 Papaver somniferum HOM05D004664 ORTHO05D005526 8.0e-130 468.0 480 52.3
Phvul.003G154500 Phaseolus vulgaris HOM05D004664 ORTHO05D005526 3.0e-129 466.1 433 58.0
Lj4g0012990 Lotus japonicus HOM05D004664 ORTHO05D005526 5.2e-129 465.3 431 55.5
TPR.G5994 Trifolium pratense HOM05D004664 ORTHO05D005526 5.2e-129 465.3 435 59.1
Psat0s2550g0080 Pisum sativum HOM05D004664 ORTHO05D005526 8.9e-129 464.5 441 55.8
Sabra08G0019200 Salix brachista HOM05D004664 ORTHO05D005526 8.9e-129 464.5 538 48.7
Sopen10g004780 Solanum pennellii HOM05D004664 ORTHO05D005526 1.2e-128 464.2 434 53.5
VMungo1215G0123 Vigna mungo HOM05D004664 ORTHO05D005526 9.8e-128 461.1 434 57.1
CANSAT64G2239 Cannabis sativa HOM05D004664 ORTHO05D005526 1.7e-127 460.3 536 47.2
Glyma.07G270100 Glycine max HOM05D004664 ORTHO05D005526 1.7e-127 460.3 430 57.0
MELO3C017782.2 Cucumis melo HOM05D004664 ORTHO05D005526 3.7e-127 459.1 453 54.3
Medtr1g043000 Medicago truncatula HOM05D004664 ORTHO05D005526 3.7e-127 459.1 448 55.8
CsaV3_1G046480 Cucumis sativus L. HOM05D004664 ORTHO05D005526 1.8e-126 456.8 453 54.7
MELO3C021804.2 Cucumis melo HOM05D004664 ORTHO05D005526 2.0e-125 453.4 464 53.7
Aqoxy1G03457 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 4.5e-125 452.2 440 53.2
PGR004G1760 Punica granatum HOM05D004664 ORTHO05D005526 1.9e-123 446.8 516 48.6
CSS0003336 Camellia sinensis var. sinensis HOM05D004664 ORTHO05D005526 4.3e-123 445.7 310 69.7
MBI15_g26850_MAGBIO Magnolia biondii HOM05D004664 ORTHO05D005526 4.3e-123 445.7 474 53.6
Medtr4g134340 Medicago truncatula HOM05D004664 ORTHO05D005526 7.3e-123 444.9 446 54.5
MD17G1131000 Malus domestica HOM05D004664 ORTHO05D005526 2.1e-122 443.4 477 52.0
Migut.H01639 Erythranthe guttata HOM05D004664 ORTHO05D005526 8.0e-122 441.4 463 50.8
Cc07_g14650 Coffea canephora HOM05D004664 ORTHO05D005526 1.0e-121 441.0 458 51.1
CAN.G413.16 Capsicum annuum HOM05D004664 ORTHO05D005526 1.8e-121 440.3 463 49.7
Lalb_Chr04g0264741 Lupinus albus HOM05D004664 ORTHO05D005526 6.8e-121 438.3 436 53.9
RcHm_v2.0_Chr7g0230211 Rosa chinensis HOM05D004664 ORTHO05D005526 4.4e-120 435.6 445 52.1
Solyc10g009000.4 Solanum lycopersicum HOM05D004664 ORTHO05D005526 2.9e-119 433.0 434 51.4
Nitab4.5_0003942g0040 Nicotiana tabacum HOM05D004664 ORTHO05D005526 4.9e-119 432.2 449 53.7
Eucgr.D00971 Eucalyptus grandis HOM05D004664 ORTHO05D005526 8.3e-119 431.4 297 69.0
CAN.G567.108 Capsicum annuum HOM05D004664 ORTHO05D005526 1.9e-118 430.3 474 46.8
SGA_v2.0_scaffold239G43984 Striga asiatica HOM05D004664 ORTHO05D005526 2.7e-117 426.4 482 49.0
FAN18G2840 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.7e-116 423.7 442 50.9
BcaB03g12095 Brassica carinata HOM05D004664 ORTHO05D005526 3.0e-116 422.9 451 51.0
ClCG01G009110 Citrullus lanatus HOM05D004664 ORTHO05D005526 3.3e-115 419.5 427 54.1
Carub.0004s0328 Capsella rubella HOM05D004664 ORTHO05D005526 5.6e-115 418.7 449 51.0
RcHm_v2.0_Chr2g0153021 Rosa chinensis HOM05D004664 ORTHO05D005526 5.6e-115 418.7 575 42.6
BolC3t19796H Brassica oleracea HOM05D004664 ORTHO05D005526 1.6e-114 417.2 460 50.4
FAN05G0490 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.6e-114 417.2 506 44.9
Peaxi162Scf00530g00824 Petunia axillaris HOM05D004664 ORTHO05D005526 1.6e-114 417.2 397 53.9
C03p75380 Brassica napus HOM05D004664 ORTHO05D005526 3.6e-114 416.0 460 51.1
vmacro21384 Vaccinium macrocarpon HOM05D004664 ORTHO05D005526 4.0e-113 412.5 527 45.5
BcaC01g00070 Brassica carinata HOM05D004664 ORTHO05D005526 5.2e-113 412.1 458 52.0
FvH4_6g39210 Fragaria vesca HOM05D004664 ORTHO05D005526 1.2e-112 411.0 575 41.9
Medtr8g042940 Medicago truncatula HOM05D004664 ORTHO05D005526 1.7e-111 407.1 443 50.6
Oeu016938.2 Olea europaea HOM05D004664 ORTHO05D005526 8.3e-111 404.8 332 60.5
FAN14G0080 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.1e-110 404.4 590 40.3
Sc25g0005660 Simmondsia chinensis HOM05D004664 ORTHO05D005526 1.4e-110 404.1 475 46.1
FAN02G1202 Fragaria x ananassa HOM05D004664 ORTHO05D005526 1.6e-109 400.6 579 40.1
A08p25430 Brassica napus HOM05D004664 ORTHO05D005526 7.8e-109 398.3 490 49.2
ECA238G0224 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.7e-108 397.1 460 47.4
Nn1g08288 Nelumbo nucifera HOM05D004664 ORTHO05D005526 1.7e-108 397.1 254 72.4
BraA08t34494Z Brassica rapa HOM05D004664 ORTHO05D005526 2.3e-108 396.7 491 48.7
Sed0026896 Sechium edule HOM05D004664 ORTHO05D005526 1.1e-107 394.4 393 54.7
HanXRQChr15g0489541 Helianthus annuus HOM05D004664 ORTHO05D005526 7.3e-107 391.7 467 46.5
Lsat_1_v5_gn_4_109780 Lactuca sativa HOM05D004664 ORTHO05D005526 1.2e-106 391.0 439 48.1
THA.LOC104809221 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 4.7e-106 389.0 452 48.7
CiPaw.09G112800 Carya illinoinensis HOM05D004664 ORTHO05D005526 1.4e-105 387.5 254 74.0
CDE04G0808 Ceratophyllum demersum HOM05D004664 ORTHO05D005526 6.8e-105 385.2 460 45.9
GSVIVG01002826001 Vitis vinifera HOM05D004664 ORTHO05D005526 8.9e-105 384.8 227 77.5
Hund19039 Selenicereus undatus HOM05D004664 ORTHO05D005526 2.6e-104 383.3 482 47.5
GSVIVG01004332001 Vitis vinifera HOM05D004664 ORTHO05D005526 3.4e-104 382.9 227 77.5
Rhsim06G0067400 Rhododendron simsii HOM05D004664 ORTHO05D005526 5.8e-104 382.1 610 41.3
THA.LOC104803679 Tarenaya hassleriana HOM05D004664 ORTHO05D005526 9.9e-104 381.3 458 46.9
Aa31LG6G11170 Aethionema arabicum HOM05D004664 ORTHO05D005526 2.2e-103 380.2 447 48.1
unitig_22.g5707 Utricularia gibba HOM05D004664 ORTHO05D005526 3.2e-102 376.3 442 45.9
AL1G42190 Arabidopsis lyrata HOM05D004664 ORTHO05D005526 7.1e-102 375.2 369 57.5
Nitab4.5_0009068g0020 Nicotiana tabacum HOM05D004664 ORTHO05D005526 7.1e-102 375.2 505 42.8
PGSC0003DMG400022830 Solanum tuberosum HOM05D004664 ORTHO05D005526 2.3e-100 370.2 267 62.9
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 3.0e-100 369.8 456 45.8
Carub.0001s2702 Capsella rubella HOM05D004664 ORTHO05D005526 3.9e-100 369.4 376 52.4
ATR0751G240 Amborella trichopoda HOM05D004664 ORTHO05D005526 5.1e-100 369.0 412 48.8
Thhalv10008005m.g Eutrema salsugineum HOM05D004664 ORTHO05D005526 2.1e-98 363.6 367 52.0
AT1G28560 Arabidopsis thaliana HOM05D004664 ORTHO05D005526 2.8e-98 363.2 370 56.8
AUR62028851 Chenopodium quinoa HOM05D004664 ORTHO05D005526 2.4e-97 360.1 473 43.6
SEGI_33972 Sequoiadendron giganteum HOM05D004664 ORTHO05D005526 5.2e-97 359.0 468 44.0
EL10Ac3g07399 Beta vulgaris HOM05D004664 ORTHO05D005526 3.2e-94 349.7 480 43.8
Actinidia28954 Actinidia chinensis HOM05D004664 ORTHO05D005526 4.2e-94 349.4 377 52.3
CARHR028060 Cardamine hirsuta HOM05D004664 ORTHO05D005526 7.1e-94 348.6 453 47.0
AUR62005705 Chenopodium quinoa HOM05D004664 ORTHO05D005526 4.6e-93 345.9 462 43.1
Lj6A128T19 Lonicera japonica HOM05D004664 ORTHO05D005526 6.6e-92 342.0 241 67.6
Ca_04223_v3 Cicer arietinum L. HOM05D004664 ORTHO05D005526 3.3e-91 339.7 353 54.4
Ah.04g149850 Amaranthus hybridus HOM05D000997 ORTHO05D000828 1.2e-88 331.3 469 43.3
Actinidia04550 Actinidia chinensis HOM05D004664 ORTHO05D005526 1.5e-88 330.9 342 54.1
Sp5g19680 Schrenkiella parvula HOM05D004664 ORTHO05D005526 1.3e-87 327.8 444 44.1
Medtr4g064230 Medicago truncatula HOM05D004664 ORTHO05D005526 4.6e-85 319.3 359 50.1
arahy.Tifrunner.gnm1.ann1.3Z2F0I Arachis hypogaea HOM05D004664 ORTHO05D005526 1.7e-84 317.4 450 43.8
ECA238G4413 Erigeron canadensis HOM05D004664 ORTHO05D005526 5.6e-83 312.4 413 45.0
ECA247G2196 Erigeron canadensis HOM05D004664 ORTHO05D005526 9.6e-83 311.6 401 44.9
Actinidia19274 Actinidia chinensis HOM05D004664 ORTHO05D005526 6.2e-82 308.9 425 42.8
Os01g0912600 Oryza sativa ssp. japonica HOM05D004664 ORTHO05D005526 9.0e-81 305.1 251 57.8
Aqoxy5G01821 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 2.0e-80 303.9 345 49.6
Cc09_g09390 Coffea canephora HOM05D004664 ORTHO05D005526 7.4e-75 285.4 185 69.7
DCAR_024762 Daucus carota HOM05D004664 ORTHO05D005526 8.1e-74 282.0 580 36.9
Lj1A1166T78 Lonicera japonica HOM05D004664 ORTHO05D005526 4.5e-72 276.2 230 59.1
DCAR_031515 Daucus carota HOM05D004664 ORTHO05D005526 1.0e-71 275.0 416 44.2
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 2.1e-69 267.3 480 36.7
Cfa002678 Carpinus fangiana HOM05D004664 ORTHO05D005526 6.0e-69 265.8 283 55.5
Sp1g24810 Schrenkiella parvula HOM05D004664 ORTHO05D005526 4.1e-65 253.1 169 66.3
Mapoly0028s0050 Marchantia polymorpha HOM05D004664 ORTHO05D005526 3.8e-63 246.5 295 42.4
AagrBONN_evm.TU.Sc2ySwM_117.2257 Anthoceros agrestis HOM05D004664 ORTHO05D005526 1.1e-59 235.0 239 48.1
Pp3c2_3010 Physcomitrium patens HOM05D004664 ORTHO05D005526 5.3e-57 226.1 489 33.5
Aqoxy1G03234 Aquilegia oxysepala HOM05D004664 ORTHO05D005526 1.5e-51 208.0 133 69.9
ECA238G2574 Erigeron canadensis HOM05D004664 ORTHO05D005526 2.0e-48 197.6 236 46.2
HPP92_017531 Vanilla planifolia HOM05D004664 ORTHO05D005526 4.7e-37 159.8 431 31.1
SMO358G0740 Selaginella moellendorffii HOM05D004664 ORTHO05D005526 3.0e-36 157.1 182 43.4
DCAR_028981 Daucus carota HOM05D004664 ORTHO05D005526 1.4e-33 148.3 121 57.9
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 1.7e-31 141.4 133 52.6
GSVIVG01004331001 Vitis vinifera HOM05D004664 ORTHO05D005526 6.5e-31 139.4 196 46.4
ECA237G0002 Erigeron canadensis HOM05D004664 ORTHO05D005526 1.8e-25 121.3 159 43.4
Lj1A1166G81 Lonicera japonica HOM05D004664 ORTHO05D005526 1.8e-25 121.3 227 38.3
Cc09_g09380 Coffea canephora HOM05D004664 ORTHO05D005526 5.4e-25 119.8 252 35.3
Lj6C128G4 Lonicera japonica HOM05D004664 ORTHO05D005526 2.0e-24 117.9 224 36.6
Duzib251G0925 Durio zibethinus HOM05D004664 ORTHO05D005526 3.8e-23 113.6 94 56.4
RcHm_v2.0_Chr6g0271881 Rosa chinensis HOM05D004664 ORTHO05D005526 2.2e-18 97.8 74 62.2
MCO08G225 Micromonas commoda HOM05D004664 ORTHO05D005526 2.4e-17 94.4 110 40.9
RcHm_v2.0_Chr6g0271991 Rosa chinensis HOM05D004664 ORTHO05D005526 7.0e-17 92.8 65 58.5
Duzib251G0924 Durio zibethinus HOM05D004664 ORTHO05D005526 1.2e-16 92.0 54 68.5
Nn1g08309 Nelumbo nucifera HOM05D004664 ORTHO05D005526 1.6e-16 91.7 94 55.3
RcHm_v2.0_Chr6g0271891 Rosa chinensis HOM05D004664 ORTHO05D005526 1.7e-15 88.2 63 57.1
GSVIVG01004440001 Vitis vinifera HOM05D004664 ORTHO05D005526 1.1e-14 85.5 101 48.5
CiPaw.09G112900 Carya illinoinensis HOM05D004664 ORTHO05D005526 5.2e-12 76.6 105 45.7
GSVIVG01004113001 Vitis vinifera HOM05D004664 ORTHO05D005526 5.2e-12 76.6 77 50.6
ECA237G0001 Erigeron canadensis HOM05D004664 ORTHO05D005526 4.6e-08 63.5 74 44.6
Cre15.g636650 Chlamydomonas reinhardtii HOM05D004664 ORTHO05D005526 3.3e-06 57.4 87 33.3


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