Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 5.8e-157 557.8 336 100.0
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 9.0e-57 224.9 366 43.2
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 5.4e-54 215.7 346 41.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 1.6e-53 214.2 358 41.9
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.3e-52 211.1 365 48.2
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 8.7e-52 208.4 340 44.1
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.6e-50 204.1 379 42.0
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 2.8e-50 203.4 371 46.4
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 6.9e-49 198.7 371 39.4
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.5e-48 197.6 371 39.4
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 5.8e-48 195.7 369 41.2
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 7.6e-48 195.3 368 40.5
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 7.6e-48 195.3 389 40.6
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.7e-47 194.1 369 43.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 1.7e-47 194.1 369 41.2
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 2.2e-47 193.7 366 39.3
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.8e-47 193.0 371 40.7
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.8e-47 193.0 372 44.1
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 8.4e-47 191.8 354 38.7
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 4.6e-45 186.0 366 38.8
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 6.0e-45 185.7 358 38.5
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 8.7e-44 181.8 256 46.9
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 1.1e-41 174.9 368 41.8
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.6e-40 170.2 372 36.3
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 2.2e-39 167.2 329 38.6
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 8.4e-39 165.2 412 36.2
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.3e-36 157.9 406 36.9
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.3e-36 157.1 336 35.4
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 1.9e-35 154.1 248 43.5
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 5.7e-35 152.5 401 33.7
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 2.8e-34 150.2 291 39.9
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 5.3e-33 146.0 413 34.9
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 6.9e-33 145.6 408 33.3
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 9.0e-33 145.2 372 36.0
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.8e-31 139.8 416 38.5
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.9e-30 137.5 384 33.1
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 6.1e-29 132.5 350 32.6
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 3.0e-28 130.2 323 33.1
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 8.8e-28 128.6 363 31.4
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.1e-27 128.3 389 33.4
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.7e-26 124.4 372 32.3
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 4.8e-26 122.9 338 32.2
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 9.1e-25 118.6 485 28.5
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 5.9e-24 115.9 367 30.2
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 3.8e-23 113.2 408 28.7
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 8.5e-23 112.1 427 29.7
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 1.1e-22 111.7 389 31.1
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.4e-22 111.3 415 31.1
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 1.9e-22 110.9 241 36.1
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.1e-21 107.5 159 47.2
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 3.6e-21 106.7 415 28.9
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 1.4e-20 104.8 380 31.3
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.5e-19 101.3 126 43.7
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 3.3e-19 100.1 126 42.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 4.4e-19 99.8 291 34.4
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 4.4e-19 99.8 234 39.3
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 7.4e-19 99.0 392 28.8
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.3e-18 98.2 348 26.4
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.8e-17 94.4 361 28.3
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 4.1e-17 93.2 230 33.0
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 7.0e-17 92.4 233 35.2
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 9.1e-17 92.0 377 27.9
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 4.5e-16 89.7 258 34.9
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 5.9e-16 89.4 240 33.8
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 5.9e-16 89.4 112 47.3
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 2.7e-13 80.5 154 36.4
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 4.7e-13 79.7 356 28.4
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 6.1e-13 79.3 358 27.1
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 8.0e-13 79.0 207 32.9
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 1.8e-12 77.8 265 31.7
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-12 77.4 177 33.9
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 3.0e-12 77.0 343 30.0
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 6.7e-12 75.9 177 33.9
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 2.0e-11 74.3 456 25.4
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 5.7e-11 72.8 344 25.9
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 7.4e-11 72.4 215 29.8
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 9.7e-11 72.0 189 33.9
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 2.2e-10 70.9 76 48.7
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 2.8e-10 70.5 189 28.6
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 2.8e-10 70.5 241 28.2
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 2.8e-10 70.5 230 27.0
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 3.7e-10 70.1 402 26.6
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 3.7e-10 70.1 258 29.1
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 3.7e-10 70.1 89 42.7
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 6.3e-10 69.3 190 32.1
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 6.3e-10 69.3 195 31.3
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 8.2e-10 68.9 248 29.0
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 8.2e-10 68.9 203 29.6
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 1.1e-09 68.6 327 28.4
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 1.4e-09 68.2 190 28.9
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 3.1e-09 67.0 464 23.3
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 4.1e-09 66.6 251 27.5
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 4.1e-09 66.6 251 27.5
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 5.3e-09 66.2 391 25.8
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 5.3e-09 66.2 136 36.8
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 1.2e-08 65.1 391 25.8
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.6e-08 64.7 198 29.3
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.6e-08 64.7 387 30.2
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 2.0e-08 64.3 194 29.9
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 2.0e-08 64.3 197 31.0
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 2.0e-08 64.3 397 25.7
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 2.0e-08 64.3 194 29.9
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 2.0e-08 64.3 197 31.0
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 4.5e-08 63.2 162 37.7
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 1.3e-07 61.6 110 37.3
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.9e-07 60.5 341 24.6
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 5.0e-07 59.7 110 35.5
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 8.5e-07 58.9 70 50.0
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 1.5e-06 58.2 88 45.5


User provided reference genes

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