Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10010189m.g Citrus clementina HOM05D000045 ORTHO05D009425 6.7e-60 233.8 116 100.0
Prupe.2G091000 Prunus persica HOM05D000045 ORTHO05D000067 5.3e-25 117.9 196 39.8
Prupe.4G246500 Prunus persica HOM05D000045 ORTHO05D000067 5.3e-25 117.9 196 39.8
Prupe.3G154400 Prunus persica HOM05D000045 ORTHO05D009425 1.2e-24 116.7 196 38.8
Rhsim02G0072900 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.7e-23 112.8 172 40.1
RhsimUnG0068200 Rhododendron simsii HOM05D000045 ORTHO05D009425 8.5e-23 110.5 151 43.0
Rhsim01G0020000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.9e-22 109.4 197 38.1
Rhsim07G0162500 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.9e-22 109.4 197 36.5
Rhsim13G0135900 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.5e-22 109.0 197 36.5
Rhsim11G0019000 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.2e-22 108.2 155 41.9
Rhsim09G0008100 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.7e-21 105.5 197 37.1
Rhsim10G0133400 Rhododendron simsii HOM05D000045 ORTHO05D009425 6.1e-21 104.4 152 41.4
Rhsim13G0080900 Rhododendron simsii HOM05D000045 ORTHO05D009425 8.0e-21 104.0 197 36.0
Rhsim04G0177900 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.0e-20 103.6 197 36.0
Rhsim08G0137500 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.3e-20 102.4 155 41.9
RhsimUnG0033900 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-20 102.4 197 36.0
Rhsim10G0083300 Rhododendron simsii HOM05D000045 ORTHO05D009425 8.8e-20 100.5 196 34.7
FvH4_4g15802 Fragaria vesca HOM05D000045 ORTHO05D000067 3.4e-19 98.6 197 35.5
Rhsim07G0159100 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.4e-19 98.2 191 34.0
FvH4_1g22662 Fragaria vesca HOM05D000045 ORTHO05D009425 2.8e-18 95.5 197 34.5
FvH4_5g31091 Fragaria vesca HOM05D000045 ORTHO05D000067 4.1e-17 91.7 106 50.9
Prupe.5G036100 Prunus persica HOM05D000045 ORTHO05D000067 7.0e-17 90.9 85 58.8
FvH4_3g27581 Fragaria vesca HOM05D000045 ORTHO05D000067 2.7e-16 89.0 190 34.7
Rhsim11G0010300 Rhododendron simsii HOM05D000045 ORTHO05D009425 4.5e-16 88.2 139 41.0
FAN22G1561 Fragaria x ananassa HOM05D000045 ORTHO05D009425 2.9e-15 85.5 102 48.0
Rhsim03G0133600 Rhododendron simsii HOM05D000045 ORTHO05D009425 6.5e-15 84.3 144 41.0
Atru.chr7.2681 Acer truncatum HOM05D000045 ORTHO05D000067 2.5e-14 82.4 82 59.8
Prupe.6G155600 Prunus persica HOM05D000045 ORTHO05D009425 1.6e-13 79.7 171 33.9
Rhsim11G0039600 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.1e-13 79.3 81 54.3
FAN27G2589 Fragaria x ananassa HOM05D000045 ORTHO05D009425 1.0e-12 77.0 182 33.0
Rhsim04G0140500 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.0e-12 77.0 165 36.4
Rhsim01G0173000 Rhododendron simsii HOM05D000045 ORTHO05D009425 3.0e-12 75.5 116 38.8
Rhsim05G0114600 Rhododendron simsii HOM05D000045 ORTHO05D009425 5.2e-12 74.7 133 38.3
Aqoxy3G01404 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.4e-11 71.6 197 31.5
Aqoxy4G01798 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.4e-09 66.6 99 43.4
Rhsim07G0154600 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.4e-09 65.9 45 64.4
PSO170G5863 Papaver somniferum HOM05D000045 ORTHO05D000067 7.0e-09 64.3 182 28.6
TPR.G12781 Trifolium pratense HOM05D000045 ORTHO05D000067 4.5e-08 61.6 99 36.4
TPR.G11300 Trifolium pratense HOM05D000045 ORTHO05D000067 5.9e-08 61.2 113 36.3
PSO017G1784 Papaver somniferum HOM05D000045 ORTHO05D000067 1.3e-07 60.1 161 29.2
PSO478G3462 Papaver somniferum HOM05D000045 ORTHO05D000067 2.9e-07 58.9 68 45.6
PSO675G4441 Papaver somniferum HOM05D000045 ORTHO05D000067 3.8e-07 58.5 115 37.4
FvH4_4g07801 Fragaria vesca HOM05D000045 ORTHO05D000067 5.0e-07 58.2 100 36.0
PSO063G4413 Papaver somniferum HOM05D000045 ORTHO05D000067 5.0e-07 58.2 60 48.3
PSO478G2933 Papaver somniferum HOM05D000045 ORTHO05D000067 8.6e-07 57.4 60 46.7
Rhsim02G0114200 Rhododendron simsii HOM05D000045 ORTHO05D009425 1.1e-06 57.0 89 39.3
FvH4_2g15201 Fragaria vesca HOM05D000045 ORTHO05D009425 1.9e-06 56.2 44 54.5
FvH4_2g18171 Fragaria vesca HOM05D000045 ORTHO05D009425 1.9e-06 56.2 40 62.5
FAN09G0994 Fragaria x ananassa HOM05D000045 ORTHO05D009425 3.3e-06 55.5 44 54.5
Lj3g0007572 Lotus japonicus HOM05D000045 ORTHO05D000067 4.2e-06 55.1 99 34.3
Lj3g0020306 Lotus japonicus HOM05D000045 ORTHO05D000067 4.2e-06 55.1 99 34.3
Lj5g0003955 Lotus japonicus HOM05D000045 ORTHO05D000067 4.2e-06 55.1 99 34.3
PSO017G6751 Papaver somniferum HOM05D000045 ORTHO05D000067 5.5e-06 54.7 123 35.0
TPR.G39490 Trifolium pratense HOM05D001491 ORTHO05D001443 5.5e-06 54.7 62 45.2
Lj1g0015716 Lotus japonicus HOM05D000045 ORTHO05D000067 7.2e-06 54.3 99 34.3
CSS0007725 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.5e-06 53.9 64 45.3


User provided reference genes

Program Settings