Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G088000 Carya illinoinensis HOM05D003928 ORTHO05D007133 0.0e+00 1510.7 796 100.0
CiPaw.16G051800 Carya illinoinensis HOM05D003928 ORTHO05D007133 0.0e+00 1149.0 663 90.3
Cfa019749 Carpinus fangiana HOM05D003928 ORTHO05D007133 0.0e+00 1089.7 991 61.5
Haze_18702 Corylus avellana HOM05D003928 ORTHO05D007133 6.6e-300 1033.9 991 59.5
QL10p025782 Quercus lobata HOM05D003928 ORTHO05D007133 9.2e-286 986.9 980 59.1
Prupe.5G223200 Prunus persica HOM05D003928 ORTHO05D007133 3.5e-253 878.6 981 53.5
RcHm_v2.0_Chr7g0185741 Rosa chinensis HOM05D003928 ORTHO05D007133 6.0e-253 877.9 979 53.6
MD14G1228200 Malus domestica HOM05D003928 ORTHO05D007133 8.2e-250 867.5 980 53.2
Ciclev10018705m.g Citrus clementina HOM05D003928 ORTHO05D007133 5.7e-243 844.7 980 52.8
FAN13G0494 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.3e-242 843.6 979 51.7
FAN08G0705 Fragaria x ananassa HOM05D003928 ORTHO05D007133 2.4e-241 839.3 979 51.5
FvH4_5g11850 Fragaria vesca HOM05D003928 ORTHO05D007133 1.0e-239 833.9 979 51.2
MD06G1218100 Malus domestica HOM05D003928 ORTHO05D007133 1.7e-239 833.2 979 51.7
FAN18G2650 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.1e-238 830.5 979 51.0
Potri.015G045600 Populus trichocarpa HOM05D003928 ORTHO05D007133 1.1e-238 830.5 982 50.9
FAN18G3471 Fragaria x ananassa HOM05D003928 ORTHO05D007133 4.2e-238 828.6 979 51.0
Thecc.03G037800 Theobroma cacao HOM05D003928 ORTHO05D007133 5.5e-238 828.2 977 51.5
Dinv15697 Davidia involucrata HOM05D003928 ORTHO05D007133 9.4e-238 827.4 942 52.3
Atru.chr9.882 Acer truncatum HOM05D003928 ORTHO05D007133 1.0e-236 823.9 984 50.6
Potri.012G055000 Populus trichocarpa HOM05D003928 ORTHO05D007133 6.7e-236 821.2 984 51.9
Sabra15G0040100 Salix brachista HOM05D003928 ORTHO05D007133 1.1e-233 813.9 982 49.1
COL.COLO4_05244 Corchorus olitorius HOM05D003928 ORTHO05D007133 4.1e-233 812.0 865 56.6
CANSAT80G1256 Cannabis sativa HOM05D003928 ORTHO05D007133 4.5e-232 808.5 979 49.9
Duzib084G0756 Durio zibethinus HOM05D003928 ORTHO05D007133 1.0e-228 797.3 978 50.3
Glyma.05G237400 Glycine max HOM05D003928 ORTHO05D007133 3.0e-228 795.8 983 48.9
Lalb_Chr24g0397881 Lupinus albus HOM05D003928 ORTHO05D007133 2.6e-227 792.7 980 49.1
Eucgr.K02232 Eucalyptus grandis HOM05D003928 ORTHO05D007133 1.3e-226 790.4 978 48.4
TWI15G0374 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 2.8e-226 789.3 988 49.5
CSS0042498 Camellia sinensis var. sinensis HOM05D003928 ORTHO05D007133 5.3e-225 785.0 980 49.9
Duzib205G0965 Durio zibethinus HOM05D003928 ORTHO05D007133 5.3e-225 785.0 978 49.8
Medtr8g104380 Medicago truncatula HOM05D003928 ORTHO05D007133 5.3e-225 785.0 982 48.2
Duzib068G1360 Durio zibethinus HOM05D003928 ORTHO05D007133 9.1e-225 784.3 977 49.4
Sabra12G0038700 Salix brachista HOM05D003928 ORTHO05D007133 5.9e-224 781.6 994 48.5
TWI81G1044 Tripterygium wilfordii HOM05D003928 ORTHO05D007133 2.9e-223 779.2 991 48.8
VMungo0251G0737 Vigna mungo HOM05D003928 ORTHO05D007133 1.9e-222 776.5 979 47.6
Ca_25458_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 5.5e-222 775.0 983 47.4
Gorai.008G287400 Gossypium raimondii HOM05D003928 ORTHO05D007133 4.0e-220 768.8 977 49.8
Manes.05G124730 Manihot esculenta HOM05D003928 ORTHO05D007133 4.0e-220 768.8 984 48.4
Lj6g0007940 Lotus japonicus HOM05D003928 ORTHO05D007133 4.4e-219 765.4 983 47.6
Cpa.g.sc3.486 Carica papaya HOM05D003928 ORTHO05D007133 2.2e-218 763.1 982 49.0
Lalb_Chr22g0353161 Lupinus albus HOM05D003928 ORTHO05D007133 1.8e-217 760.0 980 47.2
Gohir.A12G266900 Gossypium hirsutum HOM05D003928 ORTHO05D007133 1.2e-216 757.3 960 49.8
Actinidia02661 Actinidia chinensis HOM05D003928 ORTHO05D007133 1.6e-216 756.9 949 48.8
CsaV3_1G006710 Cucumis sativus L. HOM05D003928 ORTHO05D007133 1.7e-215 753.4 981 47.5
TPR.G32710 Trifolium pratense HOM05D003928 ORTHO05D007133 1.7e-215 753.4 982 47.1
Psat7g010840 Pisum sativum HOM05D003928 ORTHO05D007133 3.8e-215 752.3 982 46.8
Gohir.D12G267400 Gossypium hirsutum HOM05D003928 ORTHO05D007133 2.5e-214 749.6 977 48.9
vmacro17703 Vaccinium macrocarpon HOM05D003928 ORTHO05D007133 1.6e-213 746.9 982 48.0
MELO3C002096.2 Cucumis melo HOM05D003928 ORTHO05D007133 2.1e-213 746.5 981 47.3
ClCG00G001070 Citrullus lanatus HOM05D003928 ORTHO05D007133 2.3e-212 743.0 981 47.7
ClCG04G011000 Citrullus lanatus HOM05D003928 ORTHO05D007133 2.3e-212 743.0 981 47.7
PGR044G0175 Punica granatum HOM05D003928 ORTHO05D007133 5.2e-212 741.9 980 46.5
Rhsim08G0131700 Rhododendron simsii HOM05D003928 ORTHO05D007133 1.3e-210 737.3 981 47.5
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea HOM05D003928 ORTHO05D007133 7.7e-208 728.0 942 47.3
Lj5A151T51 Lonicera japonica HOM05D003928 ORTHO05D007133 3.6e-205 719.2 966 47.5
GSVIVG01008318001 Vitis vinifera HOM05D003928 ORTHO05D007133 2.0e-203 713.4 975 46.2
Aqoxy3G00241 Aquilegia oxysepala HOM05D003928 ORTHO05D007133 1.2e-200 704.1 991 45.6
Glyma.08G044600 Glycine max HOM05D003928 ORTHO05D007133 1.2e-200 704.1 980 44.2
DCAR_023214 Daucus carota HOM05D003928 ORTHO05D007133 4.5e-200 702.2 987 44.7
Sed0028203 Sechium edule HOM05D003928 ORTHO05D007133 5.6e-198 695.3 981 45.8
Sopen03g038150 Solanum pennellii HOM05D003928 ORTHO05D007133 4.0e-196 689.1 982 44.0
Nitab4.5_0003433g0050 Nicotiana tabacum HOM05D003928 ORTHO05D007133 8.9e-196 688.0 816 49.5
Solyc03g119270.1 Solanum lycopersicum HOM05D003928 ORTHO05D007133 1.5e-195 687.2 982 44.1
Cc04_g07000 Coffea canephora HOM05D003928 ORTHO05D007133 7.5e-195 684.9 999 43.5
CAN.G1425.25 Capsicum annuum HOM05D003928 ORTHO05D007133 8.3e-194 681.4 979 43.1
Nn6g34767 Nelumbo nucifera HOM05D003928 ORTHO05D007133 1.1e-193 681.0 818 48.4
Nitab4.5_0008233g0010 Nicotiana tabacum HOM05D003928 ORTHO05D007133 4.1e-193 679.1 981 43.3
Peaxi162Scf00683g00003 Petunia axillaris HOM05D003928 ORTHO05D007133 1.3e-191 674.1 984 43.6
TAR629G1872 Trochodendron aralioides HOM05D003928 ORTHO05D007133 4.7e-189 665.6 627 60.4
Sc04g0003430 Simmondsia chinensis HOM05D003928 ORTHO05D007133 7.5e-187 658.3 981 43.3
Hund10276 Selenicereus undatus HOM05D003928 ORTHO05D007133 1.7e-186 657.1 839 49.1
PGSC0003DMG400005647 Solanum tuberosum HOM05D003928 ORTHO05D007133 3.7e-186 656.0 874 44.7
PSO017G5964 Papaver somniferum HOM05D003928 ORTHO05D007133 1.7e-178 630.6 981 42.9
PSO478G2973 Papaver somniferum HOM05D003928 ORTHO05D007133 2.9e-178 629.8 984 42.5
Lsat_1_v5_gn_8_145181 Lactuca sativa HOM05D003928 ORTHO05D007133 1.4e-177 627.5 981 41.8
HanXRQChr17g0558301 Helianthus annuus HOM05D003928 ORTHO05D007133 2.7e-176 623.2 897 43.9
MBI16_g28239_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 2.3e-175 620.2 986 43.5
EL10Ac4g08652 Beta vulgaris HOM05D003928 ORTHO05D007133 1.6e-173 614.0 984 43.1
Ca_25459_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 1.5e-171 607.4 630 54.1
AUR62033807 Chenopodium quinoa HOM05D003928 ORTHO05D007133 1.4e-169 600.9 933 41.8
ECA233G2967 Erigeron canadensis HOM05D003928 ORTHO05D007133 4.1e-169 599.4 985 40.9
Ah.15g090400 Amaranthus hybridus HOM05D003928 ORTHO05D007133 3.5e-168 596.3 978 40.7
AUR62029899 Chenopodium quinoa HOM05D003928 ORTHO05D007133 7.3e-166 588.6 931 41.2
THA.LOC104820383 Tarenaya hassleriana HOM05D003928 ORTHO05D007133 1.2e-165 587.8 881 42.8
SGA_v2.0_scaffold25G10975 Striga asiatica HOM05D003928 ORTHO05D007133 3.6e-165 586.3 987 41.8
Carub.0001s3791 Capsella rubella HOM05D003928 ORTHO05D007133 7.1e-161 572.0 870 41.3
AT1G48760 Arabidopsis thaliana HOM05D003928 ORTHO05D007133 2.6e-155 553.5 911 39.6
Migut.I00406 Erythranthe guttata HOM05D003928 ORTHO05D007133 2.6e-155 553.5 860 41.3
CARHR038730 Cardamine hirsuta HOM05D003928 ORTHO05D007133 2.4e-153 547.0 872 40.0
Aa31LG8G5140 Aethionema arabicum HOM05D003928 ORTHO05D007133 1.2e-152 544.7 872 40.3
C05p35390 Brassica napus HOM05D003928 ORTHO05D007133 3.5e-152 543.1 873 39.4
Sp1g35680 Schrenkiella parvula HOM05D003928 ORTHO05D007133 4.6e-152 542.7 901 39.5
Thhalv10020046m.g Eutrema salsugineum HOM05D003928 ORTHO05D007133 6.0e-152 542.3 903 39.8
AL1G55480 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 7.9e-152 542.0 959 39.1
ATR1125G015 Amborella trichopoda HOM05D003928 ORTHO05D007133 2.5e-150 537.0 981 38.4
Aa31LG10G4780 Aethionema arabicum HOM05D003928 ORTHO05D007133 4.0e-148 529.6 842 40.6
Sp3g16410 Schrenkiella parvula HOM05D003928 ORTHO05D007133 8.4e-146 521.9 902 38.8
BraA05t20995Z Brassica rapa HOM05D003928 ORTHO05D007133 7.9e-144 515.4 854 38.4
CARHR093630 Cardamine hirsuta HOM05D003928 ORTHO05D007133 1.0e-143 515.0 901 38.3
A05p20900 Brassica napus HOM05D003928 ORTHO05D007133 3.9e-143 513.1 854 38.4
BcaC05g27555 Brassica carinata HOM05D003928 ORTHO05D007133 1.5e-142 511.1 871 38.5
CDE04G1035 Ceratophyllum demersum HOM05D003928 ORTHO05D007133 1.9e-142 510.8 926 38.6
BolC5t33475H Brassica oleracea HOM05D003928 ORTHO05D007133 3.1e-140 503.4 873 38.6
SHI26956 Sapria himalayana HOM05D003928 ORTHO05D007133 5.8e-139 499.2 898 37.4
AL3G31520 Arabidopsis lyrata HOM05D003928 ORTHO05D007133 1.4e-137 494.6 874 38.3
A05p31370 Brassica napus HOM05D003928 ORTHO05D007133 2.5e-137 493.8 873 38.4
C05p47670 Brassica napus HOM05D003928 ORTHO05D007133 7.1e-137 492.3 873 38.1
BraA05t21975Z Brassica rapa HOM05D003928 ORTHO05D007133 2.8e-133 480.3 873 38.1
SEGI_04687 Sequoiadendron giganteum HOM05D003928 ORTHO05D007133 6.9e-132 475.7 922 35.6
Phvul.002G317900 Phaseolus vulgaris HOM05D003928 ORTHO05D007133 9.0e-132 475.3 593 48.1
HPP92_023134 Vanilla planifolia HOM05D003928 ORTHO05D007133 2.2e-130 470.7 1010 36.5
Actinidia19834 Actinidia chinensis HOM05D003928 ORTHO05D007133 7.9e-120 435.6 510 49.8
Carub.0003s1806 Capsella rubella HOM05D003928 ORTHO05D007133 2.5e-113 414.1 925 33.2
MBI16_g33214_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D007133 1.6e-107 394.8 395 53.9
Zm00001eb410080 Zea mays HOM05D003928 ORTHO05D007133 1.5e-105 388.3 998 31.4
AagrBONN_evm.TU.Sc2ySwM_368.2497 Anthoceros agrestis HOM05D003928 ORTHO05D007133 2.7e-104 384.0 935 32.1
Os01g0512200 Oryza sativa ssp. japonica HOM05D003928 ORTHO05D007133 2.0e-102 377.9 1004 31.0
Zm00001eb137140 Zea mays HOM05D003928 ORTHO05D007133 5.3e-100 369.8 1000 30.3
CAN.G1129.1 Capsicum annuum HOM05D003928 ORTHO05D007133 5.9e-83 313.2 449 43.4
Mapoly0001s0514 Marchantia polymorpha HOM05D003928 ORTHO05D007133 5.2e-79 300.1 643 35.0
SMO367G0105 Selaginella moellendorffii HOM05D003928 ORTHO05D007133 3.1e-71 274.2 707 29.0
Pp3c5_28670 Physcomitrium patens HOM05D003928 ORTHO05D007133 7.3e-65 253.1 735 31.8
FAN04G0052 Fragaria x ananassa HOM05D003928 ORTHO05D011217 1.1e-60 239.2 145 81.4
FAN22G1762 Fragaria x ananassa HOM05D003928 ORTHO05D007133 1.2e-59 235.7 145 78.6
CBR_g44606 Chara braunii HOM05D003928 ORTHO05D007133 3.4e-54 217.6 516 28.7
Dinv28123 Davidia involucrata HOM05D003928 ORTHO05D007133 2.6e-46 191.4 122 78.7
TAR629G1514 Trochodendron aralioides HOM05D003928 ORTHO05D007133 1.7e-45 188.7 138 73.2
FAN22G1848 Fragaria x ananassa HOM05D003928 ORTHO05D007133 7.8e-43 179.9 106 83.0
TAR371G0905 Trochodendron aralioides HOM05D003928 ORTHO05D018521 8.1e-40 169.9 138 66.7
MCO13G008 Micromonas commoda HOM05D003928 ORTHO05D007133 1.8e-34 152.1 793 23.7
MBI16_g33212_MAGBIO Magnolia biondii HOM05D003928 ORTHO05D048557 1.7e-29 135.6 235 49.8
Oeu000997.1 Olea europaea HOM05D003928 ORTHO05D007133 1.6e-27 129.0 123 55.3
PRCOL_00004580 Prasinoderma coloniale HOM05D003928 ORTHO05D007133 2.7e-19 101.7 132 46.2
C02p35100 Brassica napus HOM05D003928 ORTHO05D018521 2.2e-16 92.0 56 76.8
BcaC03g15768 Brassica carinata HOM05D003928 ORTHO05D018521 1.4e-15 89.4 118 47.5
BolC2t09524H Brassica oleracea HOM05D003928 ORTHO05D018521 1.4e-15 89.4 56 75.0
C05p27100 Brassica napus HOM05D003902 ORTHO05D018521 1.0e-13 83.2 53 71.7
BolC3t16824H Brassica oleracea HOM05D003902 ORTHO05D018521 5.0e-13 80.9 49 77.6
SEGI_11458 Sequoiadendron giganteum HOM05D003928 ORTHO05D048557 2.7e-11 75.1 139 35.3
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 3.0e-10 71.6 99 42.4
VMungo1127G1783 Vigna mungo HOM05D003928 ORTHO05D007133 2.5e-09 68.6 69 52.2
Ca_28055_v3 Cicer arietinum L. HOM05D003928 ORTHO05D007133 1.3e-08 66.2 138 40.6
BcaB07g32364 Brassica carinata HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
BcaB07g32366 Brassica carinata HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
A09p40930 Brassica napus HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
C05p23090 Brassica napus HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
BolC5t31007H Brassica oleracea HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
BraA09t39583Z Brassica rapa HOM05D000929 ORTHO05D003255 3.4e-06 58.2 158 27.8
CARHR024300 Cardamine hirsuta HOM05D000929 ORTHO05D003255 4.5e-06 57.8 149 28.2
THA.LOC104822131 Tarenaya hassleriana HOM05D000929 ORTHO05D003255 7.7e-06 57.0 149 28.2


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