Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 8.7e-137 490.3 255 100.0
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 1.8e-97 359.8 264 73.5
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.4e-88 328.9 247 72.1
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 3.7e-79 298.9 262 64.5
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 5.9e-77 291.6 236 64.0
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 1.7e-76 290.0 246 65.4
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 1.7e-76 290.0 246 65.4
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 2.9e-76 289.3 236 64.4
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 6.6e-76 288.1 250 64.0
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 6.6e-76 288.1 236 64.4
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 8.6e-76 287.7 242 64.5
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.5e-75 287.0 234 67.1
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 5.5e-75 285.0 259 62.2
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 1.2e-74 283.9 227 67.0
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.6e-74 283.5 236 63.1
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.6e-74 282.3 236 65.3
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 6.1e-74 281.6 239 63.2
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.4e-73 280.4 243 63.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 1.8e-73 280.0 249 62.2
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 6.8e-73 278.1 242 61.2
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 2.0e-72 276.6 222 65.8
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 2.0e-72 276.6 232 66.4
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 2.6e-72 276.2 222 67.6
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 7.5e-72 274.6 237 63.3
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 1.7e-71 273.5 224 61.6
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 6.3e-71 271.6 242 60.7
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 8.3e-71 271.2 222 61.3
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 1.8e-70 270.0 253 60.5
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 3.2e-70 269.2 233 64.8
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 5.4e-70 268.5 286 57.0
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 7.0e-70 268.1 220 65.0
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 7.0e-70 268.1 221 63.8
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.2e-69 267.3 228 64.5
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 2.7e-69 266.2 240 62.9
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 5.9e-69 265.0 222 64.9
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 7.8e-69 264.6 247 57.9
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 1.0e-68 264.2 220 60.9
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 1.3e-68 263.8 221 61.5
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 2.9e-68 262.7 226 60.6
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 8.6e-68 261.2 251 59.0
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 8.6e-68 261.2 241 56.0
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.5e-67 260.4 260 53.8
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 1.9e-67 260.0 226 62.4
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 1.9e-67 260.0 271 53.1
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 7.3e-67 258.1 238 58.8
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 9.5e-67 257.7 244 53.7
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 9.5e-67 257.7 215 61.4
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 3.6e-66 255.8 238 58.8
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 6.1e-66 255.0 234 56.4
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 8.0e-66 254.6 232 60.8
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 1.0e-65 254.2 215 60.9
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 1.8e-65 253.4 208 62.0
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 5.2e-65 251.9 244 54.9
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 8.9e-65 251.1 248 55.2
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 8.9e-65 251.1 235 56.2
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.6e-64 249.6 236 55.9
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 3.4e-64 249.2 220 60.0
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 5.8e-64 248.4 236 58.1
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 9.8e-64 247.7 228 57.9
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 1.3e-63 247.3 223 57.0
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 1.7e-63 246.9 244 54.1
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.7e-63 246.9 235 56.2
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 2.2e-63 246.5 259 51.0
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 4.9e-63 245.4 244 54.1
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 1.9e-62 243.4 221 54.3
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 4.1e-62 242.3 258 51.9
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 5.4e-62 241.9 244 54.5
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 1.2e-61 240.7 221 53.4
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 1.2e-61 240.7 221 53.4
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 1.2e-61 240.7 238 53.8
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 2.0e-61 240.0 225 55.6
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 3.5e-61 239.2 220 54.1
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 1.0e-60 237.7 229 53.7
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 1.7e-60 236.9 221 52.9
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 4.3e-59 232.3 244 51.2
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 5.8e-56 221.9 232 57.3
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 7.5e-56 221.5 246 50.8
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.7e-55 220.3 220 54.5
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 2.2e-55 219.9 310 43.2
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 4.9e-55 218.8 220 54.5
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 6.4e-55 218.4 240 49.6
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 1.0e-52 211.1 221 52.0
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 3.0e-52 209.5 178 60.7
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 5.2e-49 198.7 231 48.1
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 1.9e-46 190.3 192 52.1
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 7.8e-45 184.9 180 56.1
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.0e-44 184.5 227 48.0
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 3.9e-44 182.6 214 46.3
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 3.9e-44 182.6 220 43.2
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 1.2e-42 177.6 244 43.0
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.8e-42 176.4 149 65.8
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 1.4e-41 174.1 219 42.9
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 5.2e-41 172.2 444 31.1
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 2.6e-40 169.9 224 41.5
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 6.4e-39 165.2 168 57.1
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 1.0e-36 157.9 239 43.1
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 1.1e-35 154.5 193 53.9
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 3.6e-34 149.4 185 47.6
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 8.1e-34 148.3 163 47.2
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 6.9e-33 145.2 141 57.4
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 4.9e-31 139.0 167 46.7
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.7e-29 133.3 97 62.9
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 6.0e-29 132.1 127 55.9
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 2.1e-18 97.1 206 31.6
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 5.7e-11 72.4 50 68.0
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 4.8e-10 69.3 51 56.9
AL1G23580 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 5.3e-09 65.9 108 35.2
AL1G23570 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 4.5e-08 62.8 89 39.3
QL93p0107_0053 Quercus lobata HOM05D002462 ORTHO05D007680 1.7e-07 60.8 118 33.9
MCO02G117 Micromonas commoda HOM05D007345 ORTHO05D009277 7.2e-06 55.5 59 42.4


User provided reference genes

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