Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 7.3e-209 730.3 372 100.0
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.3e-176 623.2 372 85.8
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 5.3e-175 617.8 372 84.9
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-164 583.2 371 81.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-163 580.1 377 80.4
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-163 580.1 373 80.2
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 2.7e-163 578.9 377 79.8
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.7e-160 568.5 380 78.7
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 6.3e-160 567.8 373 79.1
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.9e-159 564.3 374 79.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 2.6e-158 562.4 367 79.0
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.4e-158 562.0 374 79.1
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.7e-157 559.7 374 79.4
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 8.5e-157 557.4 367 77.9
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.9e-156 556.2 373 78.0
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.3e-154 550.1 365 78.4
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 3.0e-154 548.9 373 75.6
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 2.2e-152 542.7 369 76.4
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 3.7e-152 542.0 388 74.5
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 8.2e-152 540.8 370 75.9
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.8e-151 539.7 370 76.5
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 4.1e-151 538.5 372 76.1
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 4.1e-151 538.5 372 76.1
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 5.3e-151 538.1 386 75.4
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 9.0e-151 537.3 363 76.6
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 9.0e-151 537.3 378 74.9
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 4.5e-150 535.0 379 76.3
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 7.7e-150 534.3 372 75.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.0e-149 533.9 372 74.7
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 1.7e-149 533.1 378 74.3
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 5.0e-149 531.6 366 75.7
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 8.5e-149 530.8 376 75.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 8.5e-149 530.8 376 75.3
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 2.5e-148 529.3 370 75.1
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 3.2e-148 528.9 383 73.6
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.2e-148 528.9 372 74.5
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 5.5e-148 528.1 389 72.8
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 7.2e-148 527.7 374 74.9
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.7e-147 525.8 376 75.5
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 4.6e-147 525.0 378 74.3
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 6.1e-147 524.6 375 74.7
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 7.9e-147 524.2 377 74.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 7.9e-147 524.2 367 74.9
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 3.9e-146 521.9 375 74.4
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 3.9e-146 521.9 375 74.4
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.5e-145 520.0 385 71.9
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 2.0e-145 519.6 376 73.1
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.0e-145 519.6 375 72.3
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 2.6e-145 519.2 335 79.4
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 3.3e-145 518.8 375 74.9
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 5.7e-145 518.1 375 74.4
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 7.4e-145 517.7 382 72.5
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 9.7e-145 517.3 377 74.5
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 9.7e-145 517.3 376 75.0
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.2e-144 516.2 335 79.1
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 6.3e-144 514.6 352 76.4
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 8.2e-144 514.2 373 73.7
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 4.1e-143 511.9 376 72.6
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 9.1e-143 510.8 365 75.9
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 1.5e-142 510.0 376 73.1
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.6e-142 509.2 324 80.9
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 4.5e-142 508.4 378 73.8
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 5.9e-142 508.1 374 74.1
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 2.2e-141 506.1 377 71.6
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 2.2e-141 506.1 333 79.3
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 2.9e-141 505.8 338 77.8
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.8e-141 505.4 373 71.8
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 6.5e-141 504.6 374 72.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.9e-140 503.1 333 79.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 4.2e-140 501.9 362 73.8
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 4.2e-140 501.9 374 71.7
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.2e-139 500.4 384 70.8
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.1e-139 499.6 373 71.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 4.7e-139 498.4 370 71.4
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 6.1e-139 498.0 335 77.0
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 7.9e-139 497.7 367 73.0
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.4e-138 496.9 370 72.7
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 3.0e-138 495.7 381 71.9
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.6e-137 492.7 403 69.5
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.6e-137 492.7 337 77.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.7e-136 490.0 364 72.5
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.4e-135 486.9 334 75.1
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 4.1e-135 485.3 374 70.3
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.0e-134 483.0 388 66.8
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 2.9e-133 479.2 390 66.7
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.1e-132 477.2 328 76.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 4.2e-132 475.3 369 68.8
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 7.2e-132 474.6 365 69.3
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 2.1e-131 473.0 328 74.4
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.2e-130 468.4 384 65.9
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 6.7e-130 468.0 333 71.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.2e-129 467.2 373 68.4
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 1.5e-129 466.8 326 75.5
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 7.5e-129 464.5 367 68.4
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.3e-128 463.8 279 85.3
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 6.3e-128 461.5 365 69.0
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 2.7e-126 456.1 357 67.5
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 4.5e-126 455.3 324 73.8
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 3.2e-124 449.1 330 73.9
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.7e-120 436.8 330 70.3
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 4.2e-116 422.2 384 64.1
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 4.0e-114 415.6 335 66.6
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.4e-111 407.1 291 71.5
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.8e-111 406.8 321 66.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 2.0e-110 403.3 233 87.1
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.5e-108 397.1 278 71.9
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 2.8e-107 392.9 323 63.5
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.9e-104 382.9 285 66.0
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.7e-96 357.1 314 61.1
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 7.0e-95 351.7 299 66.2
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 6.4e-88 328.6 206 80.1
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.8e-82 310.5 267 59.9
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.6e-81 306.6 242 68.2
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 2.6e-81 306.6 279 60.9
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 7.6e-81 305.1 241 61.4
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.0e-77 293.1 238 66.8
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 8.6e-77 291.6 207 74.9
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 4.7e-75 285.8 271 55.0
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.6e-68 262.3 248 58.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 8.7e-61 238.4 156 80.1
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 1.1e-55 221.5 167 70.1
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 1.1e-55 221.5 188 64.4
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.3e-53 213.8 257 47.9
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.1e-52 211.5 181 63.5
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.1e-51 207.2 181 63.0
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-50 204.5 126 82.5
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 3.5e-46 189.9 109 86.2
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.5e-46 189.9 137 74.5
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.7e-32 144.4 108 65.7
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 3.9e-29 133.3 256 33.6
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-28 131.7 112 66.1
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.4e-28 129.8 245 35.5
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.8e-24 116.7 158 44.3
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 8.5e-24 115.5 191 44.5
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 2.7e-22 110.5 241 31.5
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.3e-21 107.5 76 73.7
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 8.8e-21 105.5 164 37.2
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 3.7e-19 100.1 50 98.0
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-18 98.2 77 64.9
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.0e-17 94.4 65 70.8


User provided reference genes

Program Settings