Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 0.0e+00 1083.9 547 100.0
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 9.7e-210 733.8 508 75.8
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.9e-206 722.2 509 73.1
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 9.7e-202 707.2 503 73.6
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 3.2e-181 639.0 505 65.7
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 2.8e-177 625.9 505 66.9
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.3e-174 616.3 512 64.5
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 1.6e-172 610.1 514 64.4
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 8.0e-172 607.8 506 62.8
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 5.7e-170 601.7 508 64.2
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.3e-169 600.5 506 63.0
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 2.2e-169 599.7 512 64.1
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 1.1e-168 597.4 512 62.5
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 1.4e-168 597.0 513 63.0
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 5.9e-167 591.7 492 63.6
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 8.6e-166 587.8 506 62.1
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 1.5e-165 587.0 514 61.1
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 5.6e-165 585.1 509 62.9
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 5.6e-165 585.1 509 62.9
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.6e-164 583.6 505 62.6
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 2.8e-164 582.8 514 62.1
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 4.7e-164 582.0 509 62.5
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 4.7e-164 582.0 521 60.8
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 6.2e-164 581.6 519 60.7
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 1.4e-163 580.5 517 62.3
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 1.8e-163 580.1 510 62.0
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 3.1e-163 579.3 515 61.9
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.0e-163 578.9 504 62.5
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 8.9e-163 577.8 488 62.7
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 4.9e-161 572.0 503 60.2
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 6.4e-161 571.6 507 62.3
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-160 570.9 504 61.9
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 2.4e-160 569.7 503 60.6
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 1.6e-159 567.0 514 60.9
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.0e-159 566.6 519 61.1
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.5e-159 565.8 533 59.5
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 3.5e-159 565.8 504 61.3
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 1.0e-158 564.3 505 60.0
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.0e-158 564.3 512 60.7
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 6.6e-158 561.6 513 59.3
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 1.5e-157 560.5 505 61.2
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 2.5e-157 559.7 494 60.5
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 4.3e-157 558.9 517 58.4
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 7.3e-157 558.1 512 60.5
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 1.2e-156 557.4 505 59.6
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 3.1e-155 552.7 488 60.0
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 5.2e-155 552.0 516 57.4
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.7e-153 547.0 506 60.1
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 1.7e-153 547.0 502 58.4
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.1e-152 544.3 522 57.7
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 9.2e-152 541.2 512 58.2
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 1.2e-151 540.8 494 59.3
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.2e-151 540.8 504 60.5
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 2.1e-151 540.0 496 59.1
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 3.5e-151 539.3 511 59.1
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 4.6e-151 538.9 513 56.1
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 6.0e-151 538.5 513 55.9
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 1.0e-150 537.7 516 57.0
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 3.9e-150 535.8 513 56.1
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 8.6e-150 534.6 513 55.6
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 1.5e-149 533.9 517 56.7
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 1.5e-149 533.9 515 56.3
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 1.9e-149 533.5 512 57.2
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.9e-149 533.5 517 57.8
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 3.3e-149 532.7 512 55.7
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 3.3e-149 532.7 507 58.0
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 5.6e-149 531.9 507 60.6
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 5.6e-149 531.9 508 57.1
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 9.5e-149 531.2 520 57.1
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.2e-148 530.8 501 58.9
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 1.2e-148 530.8 506 57.3
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.1e-148 530.0 514 57.0
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 2.8e-148 529.6 510 58.4
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 3.6e-148 529.3 510 57.5
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 6.2e-148 528.5 511 56.4
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 3.1e-147 526.2 508 56.1
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 8.9e-147 524.6 515 55.1
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 4.4e-146 522.3 516 56.2
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 7.6e-146 521.5 516 55.2
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 9.9e-146 521.2 515 56.7
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.3e-145 520.8 515 56.9
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 1.7e-145 520.4 515 55.0
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 1.7e-145 520.4 515 55.0
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 2.9e-145 519.6 517 54.5
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 3.8e-145 519.2 510 56.7
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 3.8e-145 519.2 515 57.3
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.9e-144 516.9 510 55.5
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 4.1e-144 515.8 558 53.6
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 9.2e-144 514.6 509 59.3
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 9.2e-144 514.6 556 52.9
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.2e-143 514.2 504 56.7
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 3.5e-143 512.7 508 55.1
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 2.3e-142 510.0 509 55.6
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 9.6e-141 504.6 535 53.8
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 1.2e-140 504.2 512 55.3
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 4.7e-140 502.3 498 56.4
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 8.1e-140 501.5 525 53.9
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.4e-139 500.0 494 56.3
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 1.2e-138 497.7 505 55.8
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 4.4e-138 495.7 542 52.6
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 4.4e-138 495.7 511 55.0
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 4.4e-138 495.7 511 55.0
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 9.9e-138 494.6 534 53.4
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.9e-137 493.0 511 54.8
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.4e-137 491.5 511 54.0
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 2.4e-136 490.0 531 55.2
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 2.7e-135 486.5 495 54.5
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 3.5e-135 486.1 513 54.0
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 4.6e-135 485.7 511 54.0
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.7e-134 483.8 495 53.5
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 3.9e-134 482.6 504 55.2
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 5.1e-134 482.3 508 53.3
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 1.5e-133 480.7 513 53.6
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 1.5e-133 480.7 503 53.7
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 2.5e-133 479.9 507 52.3
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 8.1e-132 474.9 521 53.7
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 1.4e-131 474.2 494 53.0
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 3.1e-131 473.0 512 53.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 9.0e-131 471.5 534 51.3
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 2.6e-130 469.9 525 51.0
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 3.8e-129 466.1 495 52.3
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 4.9e-129 465.7 509 52.7
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.1e-128 464.5 428 58.4
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.9e-128 463.8 423 57.7
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 1.6e-127 460.7 526 51.1
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 1.6e-127 460.7 549 49.9
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 1.0e-126 458.0 494 53.2
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 3.1e-123 446.4 456 54.8
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 2.6e-122 443.4 510 50.4
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 8.7e-118 428.3 437 53.8
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.6e-116 424.1 504 51.0
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.1e-115 419.9 515 48.5
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.6e-111 407.5 515 48.0
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 6.3e-108 395.6 443 53.5
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 2.9e-105 386.7 490 45.7
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 9.3e-104 381.7 517 45.5
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.7e-102 375.6 350 60.9
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.1e-99 368.2 448 50.7
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.8e-99 367.5 489 45.8
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.4e-99 367.1 287 66.9
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.9e-96 357.5 348 54.9
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 6.1e-95 352.4 376 52.4
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 2.6e-93 347.1 269 70.6
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 9.7e-93 345.1 370 55.7
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.1e-88 331.6 496 46.4
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 4.8e-84 316.2 528 40.3
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 1.8e-83 314.3 306 52.3
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 1.2e-82 311.6 539 39.9
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 2.8e-76 290.4 503 40.4
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 2.7e-66 257.3 557 33.4
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 4.7e-63 246.5 529 35.3
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 1.2e-61 241.9 256 56.6
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 2.4e-51 207.6 486 34.4
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 4.3e-48 196.8 509 32.6
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 1.1e-43 182.2 140 71.4
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 2.5e-40 171.0 252 40.5
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.8e-38 162.9 190 47.9
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 2.2e-36 157.9 122 60.7
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 6.4e-36 156.4 231 41.6
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 1.1e-32 145.6 160 45.6
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-32 145.2 162 55.6
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 4.6e-26 123.6 544 26.1
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.4e-19 101.3 106 48.1
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 9.3e-19 99.4 88 56.8
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 1.7e-17 95.1 61 77.0
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.5e-16 92.0 52 82.7
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 3.6e-15 87.4 68 58.8
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 1.9e-11 75.1 71 62.0
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 3.2e-11 74.3 152 34.9
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-10 71.6 41 85.4
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.5e-10 70.9 92 46.7
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 3.3e-08 64.3 78 52.6
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 4.3e-08 63.9 57 56.1
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 9.6e-08 62.8 46 63.0
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 6.2e-07 60.1 90 37.8
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 1.4e-06 58.9 205 23.4


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