Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 5.3e-94 347.8 195 100.0
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 2.8e-66 255.8 200 68.5
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 4.0e-57 225.3 199 60.8
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 2.4e-54 216.1 201 60.7
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.2e-53 213.8 189 60.8
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.6e-53 213.4 198 62.1
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 7.8e-53 211.1 136 76.5
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 1.0e-52 210.7 197 59.9
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 1.3e-52 210.3 195 60.5
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 3.9e-52 208.8 198 62.1
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 5.0e-52 208.4 198 60.6
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 1.5e-51 206.8 203 59.6
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 1.5e-51 206.8 195 59.5
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 2.5e-51 206.1 197 61.9
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 4.3e-51 205.3 186 62.9
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 9.5e-51 204.1 196 60.7
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 1.6e-50 203.4 140 75.0
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 2.1e-50 203.0 188 61.2
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 8.1e-50 201.1 197 59.9
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 1.1e-49 200.7 181 61.3
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 1.8e-49 199.9 157 68.2
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 6.8e-49 198.0 159 67.3
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 6.8e-49 198.0 134 71.6
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 2.6e-48 196.1 142 69.7
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 3.4e-48 195.7 189 59.3
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 4.4e-48 195.3 142 69.7
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 5.8e-48 194.9 142 69.7
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 5.8e-48 194.9 195 57.4
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 7.5e-48 194.5 142 73.2
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 1.7e-47 193.4 183 59.0
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 3.7e-47 192.2 200 54.0
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 4.9e-47 191.8 185 60.0
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 1.4e-46 190.3 142 66.9
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 3.2e-46 189.1 160 60.6
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 5.4e-46 188.3 203 56.2
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 2.7e-45 186.0 160 60.6
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 4.6e-45 185.3 130 71.5
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 6.0e-45 184.9 191 51.3
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 1.0e-44 184.1 130 70.8
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 1.0e-44 184.1 140 63.6
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 1.3e-44 183.7 138 68.1
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 1.3e-44 183.7 130 70.8
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 2.3e-44 183.0 146 63.7
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 3.0e-44 182.6 201 49.8
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 3.9e-44 182.2 145 67.6
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 3.9e-44 182.2 191 51.3
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 5.1e-44 181.8 196 51.0
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 6.6e-44 181.4 200 55.5
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 6.6e-44 181.4 176 55.7
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 6.6e-44 181.4 171 57.3
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 8.6e-44 181.0 143 65.0
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 8.6e-44 181.0 141 66.0
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 3.3e-43 179.1 97 83.5
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 5.6e-43 178.3 97 84.5
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 5.6e-43 178.3 97 84.5
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 7.3e-43 177.9 144 63.9
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.3e-43 177.9 199 50.3
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 9.5e-43 177.6 97 85.6
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 1.2e-42 177.2 125 71.2
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 1.6e-42 176.8 141 62.4
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 2.1e-42 176.4 137 65.0
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 1.1e-41 174.1 135 64.4
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 5.2e-41 171.8 147 60.5
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 1.5e-40 170.2 191 52.9
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 1.5e-40 170.2 137 65.0
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 2.0e-40 169.9 123 69.9
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 2.0e-40 169.9 190 50.0
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 2.6e-40 169.5 123 68.3
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 2.6e-40 169.5 123 68.3
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 2.6e-40 169.5 123 68.3
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 4.4e-40 168.7 132 65.9
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 5.8e-40 168.3 139 64.0
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 5.8e-40 168.3 94 79.8
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 7.6e-40 167.9 123 67.5
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 7.6e-40 167.9 123 67.5
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 7.6e-40 167.9 123 67.5
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 7.6e-40 167.9 144 61.8
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.3e-39 167.2 90 85.6
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 1.7e-39 166.8 121 68.6
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 2.2e-39 166.4 186 51.1
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 2.9e-39 166.0 186 52.7
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 4.9e-39 165.2 189 56.1
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 1.7e-36 156.8 82 89.0
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 3.9e-36 155.6 94 75.5
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 8.6e-36 154.5 95 72.6
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 2.1e-34 149.8 91 73.6
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 6.2e-34 148.3 95 68.4
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 8.1e-34 147.9 174 48.9
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 1.4e-33 147.1 119 64.7
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 2.4e-33 146.4 195 49.2
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 1.5e-32 143.7 190 44.2
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 7.6e-32 141.4 104 63.5
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 7.6e-32 141.4 111 61.3
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 9.9e-32 141.0 143 54.5
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 9.3e-30 134.4 165 47.9
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 6.0e-29 131.7 127 54.3
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 8.7e-28 127.9 63 84.1
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 1.6e-26 123.6 99 61.6
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 8.4e-23 111.3 95 53.7
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 1.9e-22 110.2 61 90.2
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.1e-21 106.7 120 45.8
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 7.9e-21 104.8 96 53.1
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 1.0e-20 104.4 89 51.7
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 3.0e-20 102.8 51 94.1
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 3.0e-20 102.8 49 87.8
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 6.7e-20 101.7 150 46.0
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 1.1e-19 100.9 97 52.6
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 2.1e-18 96.7 90 46.7
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 4.8e-18 95.5 59 76.3
Cfa020517 Carpinus fangiana HOM05D005851 ORTHO05D007137 1.2e-16 90.9 116 51.7
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 2.0e-16 90.1 81 56.8
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 2.0e-16 90.1 81 56.8
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 2.0e-16 90.1 81 56.8
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 2.6e-16 89.7 126 43.7
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 2.9e-15 86.3 82 59.8
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 4.9e-15 85.5 90 53.3
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 1.4e-14 84.0 79 57.0
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 5.5e-14 82.0 78 50.0
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-13 80.1 78 55.1
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 3.9e-12 75.9 85 49.4
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 3.9e-12 75.9 94 41.5
Haze_09033 Corylus avellana HOM05D000491 ORTHO05D000359 2.5e-11 73.2 103 47.6
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 4.5e-08 62.4 35 77.1
arahy.Tifrunner.gnm1.ann1.54ECHP Arachis hypogaea HOM05D005851 ORTHO05D007137 1.7e-07 60.5 41 78.0
arahy.Tifrunner.gnm1.ann1.CS7A8V Arachis hypogaea HOM05D005851 ORTHO05D007137 1.7e-07 60.5 41 78.0
arahy.Tifrunner.gnm1.ann1.IPBJ4Y Arachis hypogaea HOM05D005851 ORTHO05D007137 1.7e-07 60.5 41 78.0
arahy.Tifrunner.gnm1.ann1.Q2BFW3 Arachis hypogaea HOM05D005851 ORTHO05D007137 1.7e-07 60.5 41 78.0
Medtr5g011478 Medicago truncatula HOM05D005851 ORTHO05D007137 4.9e-07 58.9 41 73.2
Aa31LG6G4700 Aethionema arabicum HOM05D000943 ORTHO05D002475 8.4e-07 58.2 40 72.5
arahy.Tifrunner.gnm1.ann1.6D2PAS Arachis hypogaea HOM05D005851 ORTHO05D007137 8.4e-07 58.2 41 75.6


User provided reference genes

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