Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 2.8e-91 338.6 170 100.0
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 5.9e-65 251.1 172 76.7
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 1.3e-64 250.0 171 77.2
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 8.9e-53 210.7 148 75.0
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 5.4e-42 174.9 173 59.5
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 3.9e-40 168.7 169 58.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 7.3e-39 164.5 173 52.0
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 7.3e-39 164.5 173 52.0
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 8.1e-38 161.0 167 56.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 1.1e-37 160.6 173 53.8
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 5.2e-37 158.3 173 54.3
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.8e-37 157.9 170 57.1
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 2.6e-36 156.0 172 55.2
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.9e-35 152.5 170 55.3
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 9.2e-34 147.5 172 52.3
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.2e-33 147.1 173 51.4
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 2.7e-33 146.0 169 52.1
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 5.1e-32 141.7 156 56.4
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 5.6e-31 138.3 173 49.7
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 5.6e-31 138.3 173 49.7
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.6e-30 136.7 176 51.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.6e-30 136.7 170 50.0
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 6.2e-30 134.8 173 51.4
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 5.2e-29 131.7 173 48.0
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 5.2e-29 131.7 173 46.2
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.2e-28 130.6 173 47.4
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 9.9e-28 127.5 171 47.4
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 1.3e-27 127.1 171 46.2
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 4.9e-27 125.2 174 47.1
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.4e-26 123.6 169 45.0
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 2.4e-26 122.9 164 44.5
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 4.1e-26 122.1 168 47.6
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.1e-26 122.1 168 44.6
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 5.4e-26 121.7 168 47.6
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 9.2e-26 120.9 168 44.0
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 4.6e-25 118.6 156 50.0
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 1.0e-24 117.5 174 43.7
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.7e-24 116.7 168 46.4
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.9e-24 115.5 128 50.8
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.6e-22 110.2 163 42.9
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 1.1e-21 107.5 165 42.4
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 3.1e-21 105.9 157 46.5
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 6.9e-21 104.8 142 45.8
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.0e-20 103.2 108 55.6
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 5.8e-20 101.7 166 41.0
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 1.3e-19 100.5 189 39.7
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.1e-18 97.4 153 41.8
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 2.4e-18 96.3 169 39.6
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 4.2e-18 95.5 156 44.9
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 5.4e-18 95.1 153 43.1
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.7e-17 92.8 173 37.0
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 3.5e-17 92.4 149 41.6
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 6.6e-16 88.2 139 41.7
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 1.5e-15 87.0 152 41.4
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 1.5e-15 87.0 173 37.0
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 4.8e-14 82.0 169 37.3
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 1.2e-12 77.4 128 40.6
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 1.2e-12 77.4 156 39.1
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 2.0e-12 76.6 169 35.5
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 9.9e-12 74.3 109 42.2
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 9.9e-12 74.3 172 36.0
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 1.7e-11 73.6 170 31.8
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 2.9e-11 72.8 172 36.0
HanXRQChr11g0339791 Helianthus annuus HOM05D008113 ORTHO05D009793 1.1e-10 70.9 202 34.7
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 1.1e-10 70.9 177 35.6
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 4.2e-10 68.9 91 46.2
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 5.4e-10 68.6 156 33.3
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 2.7e-09 66.2 156 37.2
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 5.6e-07 58.5 92 42.4
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 2.1e-06 56.6 89 38.2
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 2.1e-06 56.6 198 26.8
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 2.8e-06 56.2 209 26.8
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 8.1e-06 54.7 178 30.9


User provided reference genes

Program Settings