Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.3e-112 409.8 218 100.0
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.6e-102 376.3 218 91.7
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 8.6e-85 317.4 172 94.8
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 1.3e-77 293.5 222 72.1
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 1.2e-75 287.0 220 68.6
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.1e-74 283.9 187 78.1
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-73 280.0 214 70.6
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 2.0e-73 279.6 219 69.4
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.1e-71 273.9 228 68.0
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 9.3e-71 270.8 210 70.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 8.7e-69 264.2 225 65.8
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.6e-67 260.0 219 65.8
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.6e-67 260.0 196 68.4
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 1.1e-66 257.3 217 63.6
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 4.0e-66 255.4 197 68.5
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 5.3e-66 255.0 221 64.7
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 6.9e-66 254.6 222 64.0
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.2e-65 253.8 218 66.5
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 2.6e-65 252.7 211 64.5
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 5.8e-65 251.5 202 66.3
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 8.4e-64 247.7 217 64.5
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.4e-63 245.0 222 63.1
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 1.6e-62 243.4 212 62.3
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.3e-61 240.4 218 61.9
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 1.8e-61 240.0 227 59.0
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 5.1e-61 238.4 206 65.0
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 1.9e-60 236.5 210 63.8
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 2.1e-59 233.0 190 66.3
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 2.8e-59 232.6 227 60.4
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 2.8e-59 232.6 210 59.0
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 6.9e-58 228.0 218 60.1
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 9.0e-58 227.6 221 60.6
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.2e-57 227.3 224 62.1
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.5e-57 226.9 148 81.8
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 2.6e-57 226.1 223 57.4
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.7e-56 223.4 143 83.2
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 2.2e-56 223.0 213 60.1
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 3.8e-56 222.2 214 58.9
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 4.9e-56 221.9 175 65.1
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 4.2e-55 218.8 215 58.6
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.3e-55 217.6 224 60.3
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.6e-54 216.9 216 58.3
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 2.1e-54 216.5 181 64.6
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 2.1e-54 216.5 167 65.9
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 1.3e-53 213.8 211 58.3
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 1.9e-52 209.9 215 55.8
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 2.5e-52 209.5 188 61.2
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 3.3e-52 209.1 173 61.3
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 4.3e-52 208.8 215 58.1
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 4.3e-52 208.8 216 56.0
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 9.6e-52 207.6 202 59.4
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 2.1e-51 206.5 184 60.3
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 3.7e-51 205.7 198 58.1
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 8.1e-51 204.5 199 57.3
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.1e-50 204.1 225 53.3
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.2e-49 200.7 206 57.8
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 1.7e-48 196.8 178 56.2
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 4.2e-47 192.2 208 54.3
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 5.5e-47 191.8 215 56.3
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 7.9e-46 188.0 221 53.8
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 2.5e-44 183.0 221 52.5
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 1.1e-42 177.6 206 53.9
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 1.4e-42 177.2 183 53.0
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.8e-42 176.8 179 53.1
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 3.1e-42 176.0 239 49.0
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 4.1e-42 175.6 220 50.5
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 6.9e-42 174.9 161 59.6
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.2e-41 174.1 223 48.4
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 1.5e-41 173.7 221 49.3
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 2.0e-41 173.3 181 51.9
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 3.4e-41 172.6 220 46.8
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 4.5e-41 172.2 177 53.1
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 4.5e-41 172.2 177 53.1
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 7.6e-41 171.4 184 50.0
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 2.2e-40 169.9 171 52.6
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 2.9e-40 169.5 171 52.6
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 3.8e-40 169.1 171 52.0
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 3.8e-40 169.1 171 52.0
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 5.0e-40 168.7 180 54.4
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 8.5e-40 167.9 229 44.5
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 8.5e-40 167.9 203 48.8
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 1.1e-39 167.5 217 49.8
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 1.9e-39 166.8 200 49.5
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 2.3e-37 159.8 230 43.0
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 3.0e-37 159.5 197 48.7
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 5.7e-36 155.2 145 59.3
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 7.4e-36 154.8 205 50.7
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 2.4e-34 149.8 212 42.9
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 3.1e-34 149.4 228 42.5
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.7e-32 143.7 148 62.8
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 4.2e-31 139.0 214 41.1
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 5.5e-31 138.7 142 56.3
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 3.0e-29 132.9 230 41.3
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 3.1e-26 122.9 183 42.6
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 4.1e-26 122.5 195 41.0
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 3.4e-25 119.4 135 56.3
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 5.0e-24 115.5 163 46.6
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 2.5e-23 113.2 115 52.2
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 4.7e-22 109.0 86 64.0
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 8.8e-21 104.8 90 61.1
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 9.7e-20 101.3 80 61.2
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 3.2e-15 86.3 68 63.2
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 1.6e-14 84.0 63 71.4


User provided reference genes

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