Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 9.9e-115 416.8 206 100.0
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 2.8e-85 318.9 205 75.1
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 2.7e-80 302.4 210 71.0
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 3.9e-79 298.5 194 73.7
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 5.1e-79 298.1 217 68.2
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 6.7e-79 297.7 203 70.0
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.9e-78 296.2 203 70.9
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 5.7e-78 294.7 239 63.2
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 1.3e-77 293.5 205 69.8
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 1.4e-76 290.0 201 68.7
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 1.8e-76 289.7 220 66.8
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 2.4e-76 289.3 206 69.4
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 3.1e-76 288.9 205 68.8
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 6.9e-76 287.7 209 66.5
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 9.0e-76 287.3 199 70.4
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 1.5e-75 286.6 207 65.7
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 1.5e-75 286.6 204 72.5
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 4.5e-75 285.0 211 65.9
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.0e-74 283.9 199 66.8
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 1.3e-74 283.5 201 70.1
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 2.2e-74 282.7 201 69.2
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 2.5e-73 279.3 201 68.7
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 2.5e-73 279.3 202 67.8
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 4.2e-73 278.5 197 69.0
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 2.1e-72 276.2 202 67.3
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 7.9e-72 274.2 204 66.2
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 1.3e-71 273.5 236 60.2
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 1.8e-71 273.1 208 68.3
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 1.8e-71 273.1 196 68.4
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.8e-71 273.1 202 66.3
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 3.0e-71 272.3 210 64.8
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 3.9e-71 271.9 205 66.8
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 5.1e-71 271.6 199 67.8
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 5.1e-71 271.6 202 64.4
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 1.1e-70 270.4 205 66.3
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 1.5e-70 270.0 220 59.5
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 2.5e-70 269.2 205 63.9
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 2.5e-70 269.2 200 65.0
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 3.3e-70 268.9 209 63.2
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 4.3e-70 268.5 205 64.4
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 7.4e-70 267.7 207 62.3
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 7.4e-70 267.7 201 66.2
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 9.7e-70 267.3 200 64.5
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 9.7e-70 267.3 208 65.4
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 1.3e-69 266.9 204 65.2
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 1.6e-69 266.5 202 67.3
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 6.3e-69 264.6 205 62.4
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.1e-68 263.8 207 63.3
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 1.1e-68 263.8 208 66.3
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 1.4e-68 263.5 201 63.7
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 1.4e-68 263.5 213 62.0
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 1.4e-68 263.5 206 64.6
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 1.8e-68 263.1 204 64.7
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 3.1e-68 262.3 205 63.4
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 4.1e-68 261.9 214 61.2
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 4.1e-68 261.9 197 65.5
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 1.2e-67 260.4 215 59.5
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 1.2e-67 260.4 215 59.5
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 1.2e-67 260.4 204 64.2
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 1.2e-67 260.4 206 63.6
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.0e-67 259.6 203 63.1
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 2.0e-67 259.6 200 62.0
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 2.0e-67 259.6 198 64.1
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 2.6e-67 259.2 199 64.8
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 7.7e-67 257.7 200 64.0
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 1.0e-66 257.3 206 63.6
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 1.3e-66 256.9 208 62.0
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.7e-66 256.5 208 61.1
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.7e-66 256.5 201 65.2
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 1.7e-66 256.5 211 61.6
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 3.8e-66 255.4 208 61.1
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 3.8e-66 255.4 208 61.1
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 6.5e-66 254.6 205 63.9
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 8.5e-66 254.2 204 63.7
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.6e-64 248.8 208 61.5
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 1.8e-63 246.5 197 61.9
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 5.1e-63 245.0 194 63.4
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 1.5e-62 243.4 200 62.0
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 4.4e-62 241.9 195 61.5
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 4.4e-62 241.9 208 59.6
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 5.7e-62 241.5 196 62.2
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 1.4e-60 236.9 180 65.0
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 2.0e-59 233.0 208 55.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 3.4e-59 232.3 203 56.2
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 4.5e-59 231.9 197 59.4
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 5.9e-59 231.5 155 69.7
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 7.7e-59 231.1 196 58.7
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 1.1e-52 210.7 141 68.1
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 5.3e-52 208.4 130 72.3
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 6.7e-47 191.4 137 70.8
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.2e-46 190.7 112 71.4
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 4.4e-46 188.7 211 51.2
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 3.7e-45 185.7 136 61.8
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 7.0e-44 181.4 108 73.1
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 2.7e-43 179.5 113 69.0
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 4.5e-43 178.7 109 72.5
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 1.0e-42 177.6 211 47.9
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 2.1e-40 169.9 107 67.3
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 1.7e-37 160.2 143 55.9
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 3.5e-35 152.5 95 74.7
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 5.0e-34 148.7 128 55.5
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 1.2e-32 144.1 87 72.4
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 7.5e-30 134.8 77 77.9
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 6.3e-29 131.7 76 77.6
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-26 123.2 178 38.8
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 3.6e-24 115.9 121 45.5
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 3.0e-23 112.8 67 80.6
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 3.0e-23 112.8 67 80.6
arahy.Tifrunner.gnm1.ann1.Q5BN79 Arachis hypogaea HOM05D006876 ORTHO05D008708 3.9e-18 95.9 58 75.9
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.5e-17 94.0 66 62.1
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 1.2e-16 90.9 71 60.6
DCAR_020619 Daucus carota HOM05D006876 ORTHO05D008708 2.1e-16 90.1 100 53.0
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 5.2e-15 85.5 139 33.8
Oeu039192.1 Olea europaea HOM05D006876 ORTHO05D008708 2.9e-13 79.7 91 50.5
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 2.0e-11 73.6 43 69.8
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 1.9e-09 67.0 53 60.4
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 1.9e-09 67.0 53 60.4
HPP92_016900 Vanilla planifolia HOM05D006876 ORTHO05D008708 1.4e-07 60.8 92 40.2


User provided reference genes

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