Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 7.3e-68 260.4 127 100.0
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 6.0e-54 214.2 120 86.7
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 2.3e-53 212.2 120 85.0
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 1.2e-46 189.9 120 74.2
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 1.6e-46 189.5 146 66.4
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 3.5e-46 188.3 120 74.2
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 3.9e-45 184.9 121 76.9
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 3.9e-45 184.9 121 76.9
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 3.9e-45 184.9 121 74.4
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 2.5e-44 182.2 121 74.4
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 4.3e-44 181.4 120 74.2
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 5.6e-44 181.0 121 72.7
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 5.6e-44 181.0 120 74.2
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 2.1e-43 179.1 121 71.9
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 1.1e-42 176.8 121 72.7
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 5.3e-42 174.5 126 70.6
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 1.5e-41 172.9 121 69.4
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 5.8e-41 171.0 114 72.8
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 5.8e-41 171.0 114 72.8
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.3e-40 169.9 123 69.9
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 3.8e-40 168.3 125 71.2
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 4.9e-40 167.9 122 71.3
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 7.1e-39 164.1 122 65.6
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 7.1e-39 164.1 122 70.5
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 7.1e-39 164.1 121 70.2
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 7.1e-39 164.1 122 66.4
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.6e-38 162.9 120 68.3
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 4.6e-38 161.4 122 65.6
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 4.6e-38 161.4 134 62.7
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 6.0e-38 161.0 125 65.6
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 1.0e-37 160.2 130 66.9
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 1.3e-37 159.8 123 68.3
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 1.8e-37 159.5 122 65.6
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 1.8e-37 159.5 132 62.9
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 3.0e-37 158.7 130 66.2
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 3.9e-37 158.3 121 66.9
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 3.9e-37 158.3 122 66.4
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 1.1e-36 156.8 122 63.9
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 1.5e-36 156.4 123 69.1
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 1.9e-36 156.0 120 67.5
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 1.9e-36 156.0 126 67.5
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 2.5e-36 155.6 126 67.5
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 7.4e-36 154.1 120 65.8
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 1.3e-35 153.3 152 58.6
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 8.1e-35 150.6 122 67.2
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 3.1e-34 148.7 120 60.8
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 5.3e-34 147.9 118 65.3
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 2.0e-33 146.0 85 81.2
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 2.6e-33 145.6 123 64.2
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.6e-33 145.6 122 64.8
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 7.6e-33 144.1 119 63.0
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 9.9e-33 143.7 123 61.0
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 2.9e-32 142.1 119 62.2
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 2.9e-32 142.1 119 62.2
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 3.8e-32 141.7 119 62.2
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 3.8e-32 141.7 119 62.2
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 6.4e-32 141.0 126 59.5
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 1.1e-31 140.2 75 89.3
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 1.4e-31 139.8 118 59.3
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 5.5e-31 137.9 124 59.7
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 5.5e-31 137.9 120 59.2
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 7.1e-31 137.5 119 61.3
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 7.1e-31 137.5 75 86.7
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.2e-30 136.7 124 57.3
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 2.1e-30 136.0 85 81.2
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 2.7e-30 135.6 111 62.2
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 3.5e-30 135.2 126 60.3
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 6.0e-30 134.4 123 58.5
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 7.9e-30 134.0 122 58.2
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 7.9e-30 134.0 123 61.0
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 1.0e-29 133.7 120 60.8
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 2.3e-29 132.5 123 61.0
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 2.3e-29 132.5 120 59.2
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 5.1e-29 131.3 126 54.0
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 5.1e-29 131.3 120 55.8
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 2.5e-28 129.0 103 61.2
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 7.4e-28 127.5 104 62.5
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 7.4e-28 127.5 75 80.0
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 1.6e-27 126.3 136 54.4
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 6.2e-27 124.4 75 78.7
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 8.2e-27 124.0 75 77.3
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 1.5e-25 119.8 121 54.5
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 1.0e-24 117.1 99 64.6
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 1.0e-24 117.1 75 76.0
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 8.4e-24 114.0 75 73.3
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 8.4e-24 114.0 76 72.4
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 1.1e-23 113.6 78 67.9
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 2.5e-23 112.5 75 73.3
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.6e-22 109.8 87 63.2
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 1.3e-21 106.7 84 65.5
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 2.3e-21 105.9 75 65.3
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 6.7e-21 104.4 79 67.1
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 1.1e-20 103.6 84 64.3
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 5.7e-20 101.3 71 64.8
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 4.1e-18 95.1 121 46.3
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 4.5e-17 91.7 70 62.9
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 8.8e-13 77.4 83 56.6
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 5.7e-12 74.7 83 50.6
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 1.4e-10 70.1 40 80.0
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 9.1e-10 67.4 41 75.6
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 4.7e-06 55.1 86 41.9
Cre01.g030350 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 6.1e-06 54.7 72 43.1


User provided reference genes

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