Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 3.0e-111 405.2 207 100.0
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 5.0e-90 334.7 208 83.2
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 1.8e-87 326.2 214 75.7
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 2.3e-87 325.9 217 76.0
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 1.5e-86 323.2 221 76.5
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 1.9e-86 322.8 236 73.7
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 2.5e-86 322.4 217 77.0
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 3.3e-86 322.0 216 76.9
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 7.4e-86 320.9 194 81.4
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 3.7e-85 318.5 217 75.1
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 4.8e-85 318.2 216 75.9
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 1.1e-84 317.0 226 72.6
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 2.4e-84 315.8 221 73.3
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 5.3e-84 314.7 217 76.5
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 5.3e-84 314.7 217 74.2
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 6.9e-84 314.3 212 75.0
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 9.1e-84 313.9 212 75.0
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 2.0e-83 312.8 194 80.4
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 2.0e-83 312.8 212 75.9
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 2.6e-83 312.4 221 72.9
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.6e-83 312.4 194 79.4
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 2.6e-83 312.4 210 75.7
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 4.5e-83 311.6 214 73.8
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 5.9e-83 311.2 220 72.7
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 7.7e-83 310.8 217 74.7
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 7.7e-83 310.8 219 72.6
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 2.9e-82 308.9 241 67.6
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 8.5e-82 307.4 214 73.4
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 2.5e-81 305.8 221 70.6
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 5.5e-81 304.7 216 71.8
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 7.2e-81 304.3 214 72.9
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 7.2e-81 304.3 216 73.6
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 7.2e-81 304.3 218 72.0
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 9.4e-81 303.9 214 72.9
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 9.4e-81 303.9 216 74.1
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 9.4e-81 303.9 222 69.4
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 9.4e-81 303.9 214 72.9
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 1.2e-80 303.5 214 72.0
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.2e-80 303.5 217 73.3
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 1.6e-80 303.1 205 74.1
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 3.6e-80 302.0 213 74.6
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 4.7e-80 301.6 221 71.9
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 7.9e-80 300.8 215 72.1
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 7.9e-80 300.8 214 72.4
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 3.0e-79 298.9 224 71.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 2.0e-78 296.2 215 72.1
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 2.6e-78 295.8 215 70.2
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 4.4e-78 295.0 222 69.4
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 1.3e-77 293.5 193 76.7
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 2.8e-77 292.4 205 70.2
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 3.7e-77 292.0 205 71.2
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 3.7e-77 292.0 221 68.3
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 1.1e-76 290.4 205 70.2
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.1e-76 290.4 215 69.3
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 4.1e-76 288.5 208 70.2
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 4.1e-76 288.5 205 69.3
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 1.2e-75 287.0 191 75.4
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.5e-75 286.6 211 68.2
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 1.5e-75 286.6 211 68.7
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.1e-73 280.4 218 70.2
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 4.2e-73 278.5 205 68.3
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 4.2e-73 278.5 216 66.7
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 5.5e-73 278.1 213 66.7
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 7.2e-73 277.7 167 82.0
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.2e-72 276.9 167 82.0
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 1.2e-72 276.9 195 73.8
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 4.7e-72 275.0 194 72.7
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 6.1e-72 274.6 206 69.9
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.4e-71 273.5 215 63.7
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 2.3e-71 272.7 209 67.5
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 3.0e-71 272.3 217 64.5
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 5.2e-71 271.6 167 80.8
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 8.8e-71 270.8 227 64.3
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.6e-70 269.2 214 66.8
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 4.8e-69 265.0 215 64.2
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 1.1e-68 263.8 183 72.1
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 1.1e-68 263.8 167 79.0
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 2.2e-66 256.1 199 62.3
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 3.8e-66 255.4 193 67.9
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 8.5e-66 254.2 155 82.6
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 1.9e-65 253.1 167 71.9
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.6e-64 250.0 170 72.9
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 7.0e-60 234.6 152 80.9
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 5.0e-58 228.4 214 57.5
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 4.7e-56 221.9 208 58.7
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 1.2e-54 217.2 138 74.6
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 1.3e-53 213.8 194 56.2
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 5.9e-51 204.9 140 70.7
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 3.8e-50 202.2 133 82.0
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 3.7e-45 185.7 214 50.5
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 6.3e-45 184.9 140 72.1
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 8.3e-45 184.5 140 71.4
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 7.0e-44 181.4 135 64.4
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.1e-28 131.0 95 73.7
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.6e-27 125.6 80 82.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.6e-27 125.6 80 82.5
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 5.2e-23 112.1 209 37.8
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 1.7e-21 107.1 62 83.9
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 2.1e-19 100.1 59 79.7
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 8.9e-15 84.7 77 61.0
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 4.9e-13 79.0 153 37.9
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 1.1e-12 77.8 67 46.3
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 2.7e-11 73.2 198 30.8
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 2.6e-06 56.6 43 58.1
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 9.9e-06 54.7 42 61.9


User provided reference genes

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