Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 4.3e-264 914.8 762 100.0
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.2e-133 481.5 773 61.8
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 2.9e-127 460.3 772 67.6
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 8.4e-119 432.2 769 55.8
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.6e-117 427.9 771 61.9
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 6.9e-113 412.5 772 58.2
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 9.0e-113 412.1 761 63.3
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 4.5e-112 409.8 771 58.1
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.4e-110 404.8 771 57.3
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.5e-110 402.9 761 53.4
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.5e-110 402.9 771 62.9
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.1e-110 402.5 769 49.9
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.2e-109 401.7 771 52.4
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.0e-108 398.7 765 50.1
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.8e-108 397.9 762 55.5
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.3e-107 393.3 761 53.4
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 2.4e-105 387.5 773 60.9
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.4e-102 378.3 771 55.8
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 2.5e-102 377.5 762 55.8
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.3e-100 371.7 771 57.3
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.4e-97 360.9 771 52.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 9.0e-97 359.0 732 59.7
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 5.0e-95 353.2 786 45.4
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 6.5e-95 352.8 787 58.1
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.4e-92 345.1 770 52.9
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 8.8e-92 342.4 742 57.8
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 4.5e-88 330.1 759 59.7
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.0e-87 328.9 771 57.1
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 3.8e-87 327.0 772 55.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 6.5e-87 326.2 770 49.9
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.1e-85 321.2 749 61.1
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 4.7e-85 320.1 733 50.9
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.7e-82 311.6 772 54.5
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.8e-82 310.8 725 53.8
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 4.8e-82 310.1 771 45.8
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.4e-81 308.5 773 53.4
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.3e-79 302.0 748 60.2
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 2.2e-79 301.2 781 54.4
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 3.8e-79 300.4 769 50.5
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 8.0e-77 292.7 778 52.4
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.5e-75 288.5 769 48.4
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 5.7e-75 286.6 729 44.9
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 9.7e-75 285.8 765 44.3
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 3.7e-74 283.9 754 54.1
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.4e-73 282.0 770 42.1
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 4.1e-73 280.4 751 52.3
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 5.3e-73 280.0 773 50.5
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 5.3e-73 280.0 778 51.9
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 7.0e-73 279.6 684 55.3
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.0e-72 278.1 766 50.0
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.5e-70 271.9 770 49.0
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 9.4e-70 269.2 738 46.9
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 1.0e-68 265.8 770 51.0
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 6.7e-68 263.1 684 56.4
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.2e-67 262.3 777 53.2
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.2e-67 262.3 780 51.8
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 3.7e-66 257.3 781 49.4
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.8e-65 255.0 752 51.9
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.1e-65 254.2 767 50.8
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 5.3e-65 253.4 771 49.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.6e-64 251.9 764 45.2
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 5.0e-63 246.9 747 54.1
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 3.2e-62 244.2 773 45.9
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.1e-61 240.0 757 51.3
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.0e-60 239.2 477 48.0
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.0e-60 239.2 477 48.0
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 3.0e-60 237.7 457 47.9
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 3.4e-59 234.2 761 52.3
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 3.4e-59 234.2 725 52.4
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 1.3e-58 232.3 753 50.1
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 1.4e-57 228.8 780 53.2
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 9.1e-57 226.1 769 49.7
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.2e-56 225.7 770 45.7
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 4.5e-56 223.8 735 53.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 4.5e-56 223.8 768 51.2
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 5.0e-55 220.3 748 43.0
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 4.2e-54 217.2 753 50.7
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 3.6e-53 214.2 776 50.1
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.8e-52 209.9 767 50.3
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 6.8e-52 209.9 716 44.3
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.5e-51 206.5 481 46.2
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 1.7e-50 205.3 783 47.1
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.2e-50 204.9 770 47.7
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 2.8e-50 204.5 751 40.9
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.6e-48 198.7 486 44.7
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 2.9e-47 194.5 782 44.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 6.6e-47 193.4 769 41.1
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.9e-46 191.8 446 44.6
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 7.3e-46 189.9 415 45.8
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 4.7e-45 187.2 770 44.8
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.8e-44 185.3 483 48.2
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.6e-43 181.4 768 41.0
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 2.6e-43 181.4 766 42.0
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.4e-41 173.7 183 55.7
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 2.6e-35 154.8 340 60.9
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 3.2e-33 147.9 762 46.3
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 4.1e-33 147.5 160 53.1
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.6e-32 145.6 776 39.7
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 6.8e-28 130.2 721 46.9
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.5e-27 129.0 741 45.5
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 7.5e-27 126.7 203 54.7
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.3e-22 110.9 250 52.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 4.7e-21 107.5 744 39.4
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.1e-20 106.3 137 46.7
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.2e-20 104.0 354 34.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.1e-17 96.3 440 28.9
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.4e-17 95.1 343 59.8
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 3.5e-16 91.3 125 47.2
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 3.3e-14 84.7 162 39.5
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 1.7e-10 72.4 116 38.8
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 2.9e-10 71.6 749 45.5
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-09 68.9 72 55.6
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 9.3e-09 66.6 448 34.4
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.6e-08 64.3 782 31.6
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 6.0e-08 63.9 162 37.0
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 1.0e-07 63.2 162 37.0
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 5.1e-07 60.8 71 47.9
PSO170G1391 Papaver somniferum HOM05D006421 ORTHO05D008268 9.6e-06 56.6 76 50.0


User provided reference genes

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