Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 0.0e+00 1260.7 647 100.0
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 5.0e-298 1027.3 688 78.8
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 3.1e-292 1008.1 691 77.6
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 4.8e-248 861.3 699 67.4
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 7.6e-246 854.0 668 71.7
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 1.1e-244 850.1 668 71.0
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 2.8e-240 835.5 684 68.7
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 2.8e-240 835.5 709 64.3
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 3.7e-240 835.1 702 65.4
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 1.2e-238 830.1 718 64.1
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 5.8e-238 827.8 691 65.1
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 9.9e-238 827.0 700 65.3
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 1.7e-237 826.2 688 65.3
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 1.4e-236 823.2 678 68.0
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 2.4e-236 822.4 713 64.1
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 5.5e-236 821.2 711 64.3
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 6.0e-235 817.8 691 65.0
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 2.3e-234 815.8 691 65.1
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 3.0e-234 815.5 697 64.8
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 3.3e-233 812.0 683 66.0
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.8e-231 806.2 691 64.5
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 2.4e-231 805.8 682 67.0
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.1e-231 805.4 669 66.8
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 9.0e-231 803.9 699 64.9
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 1.5e-230 803.1 713 63.1
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.4e-230 802.0 691 65.8
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 5.8e-230 801.2 705 63.0
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 2.9e-229 798.9 699 63.5
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.4e-228 796.6 696 63.5
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 3.3e-225 785.4 708 64.0
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 1.6e-224 783.1 700 62.9
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 8.2e-224 780.8 693 63.3
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 8.2e-224 780.8 688 64.5
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 7.7e-222 774.2 677 64.3
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 2.2e-221 772.7 624 67.5
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 3.8e-221 771.9 696 62.6
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 3.2e-220 768.8 694 63.4
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 7.9e-219 764.2 710 62.3
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.0e-218 763.8 693 61.6
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 1.8e-218 763.1 739 60.8
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 5.1e-218 761.5 689 63.6
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 2.8e-216 755.7 670 63.1
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 1.0e-213 747.3 688 63.5
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 7.9e-211 737.6 720 58.8
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.0e-209 733.0 688 61.3
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 1.7e-208 729.9 688 61.9
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 6.3e-208 728.0 679 61.0
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 9.1e-207 724.2 674 60.7
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 1.5e-206 723.4 688 61.6
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 1.0e-205 720.7 679 58.6
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 2.9e-205 719.2 697 60.8
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 2.9e-205 719.2 686 61.5
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.8e-205 718.8 689 60.7
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 8.5e-205 717.6 618 63.8
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 1.9e-204 716.5 691 60.2
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 9.4e-204 714.1 687 59.8
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 3.6e-203 712.2 687 59.5
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 4.7e-203 711.8 692 59.4
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 8.0e-203 711.1 679 58.9
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 1.0e-202 710.7 677 58.3
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.0e-202 710.7 688 60.2
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 1.0e-202 710.7 687 59.8
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 1.8e-202 709.9 688 59.4
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 3.0e-202 709.1 680 60.4
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 6.7e-202 708.0 688 59.2
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 7.0e-199 698.0 714 58.1
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 9.1e-199 697.6 688 59.4
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 3.5e-198 695.7 684 58.0
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 8.5e-197 691.0 684 57.3
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 1.1e-196 690.6 690 59.1
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 2.1e-195 686.4 686 58.6
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 6.1e-195 684.9 676 60.7
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 6.1e-195 684.9 681 60.2
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.3e-194 682.9 677 59.1
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 2.0e-193 679.9 708 58.3
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 5.3e-191 671.8 706 56.9
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 9.1e-191 671.0 676 60.2
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 1.2e-190 670.6 678 57.1
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 2.7e-190 669.5 640 59.5
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 1.6e-187 660.2 691 57.2
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.0e-186 657.5 693 56.0
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 6.8e-186 654.8 574 62.7
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 1.2e-185 654.1 659 59.2
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 3.5e-182 642.5 674 55.3
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.5e-182 642.5 676 57.1
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 4.5e-182 642.1 677 54.7
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 4.5e-182 642.1 674 55.3
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 5.9e-182 641.7 527 65.5
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 3.8e-181 639.0 575 61.7
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.9e-180 636.7 674 54.9
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 2.1e-179 633.3 706 55.1
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 2.3e-178 629.8 684 55.3
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 3.0e-178 629.4 686 56.1
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 4.0e-178 629.0 713 55.3
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 1.2e-177 627.5 678 54.4
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.1e-172 610.9 740 52.0
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 1.6e-171 607.1 674 55.0
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 2.3e-170 603.2 518 62.2
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 6.8e-170 601.7 708 53.1
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 4.9e-168 595.5 516 62.0
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 3.9e-165 585.9 636 56.4
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 6.6e-165 585.1 711 51.6
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 7.5e-161 571.6 553 57.1
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 1.4e-146 524.2 319 83.7
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 1.9e-143 513.8 591 53.0
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 5.4e-143 512.3 474 61.0
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 2.3e-141 506.9 548 54.0
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 4.4e-137 492.7 439 64.2
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 7.1e-135 485.3 656 47.9
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 3.3e-132 476.5 548 52.0
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 5.8e-129 465.7 672 43.8
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 5.6e-124 449.1 348 69.8
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 3.7e-123 446.4 348 68.4
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 6.2e-115 419.1 349 67.3
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 2.6e-113 413.7 324 68.2
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 4.1e-106 389.8 317 65.0
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 5.3e-106 389.4 382 57.1
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 6.5e-96 355.9 651 39.0
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 2.1e-86 324.3 836 32.7
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 4.4e-84 316.6 894 32.1
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 1.8e-77 294.7 375 50.7
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 5.4e-74 283.1 367 49.0
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 1.5e-71 275.0 329 55.3
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-66 256.1 316 51.6
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 5.7e-60 236.5 219 58.4
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 6.6e-56 223.0 142 81.0
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 8.6e-56 222.6 299 47.2
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 1.1e-55 222.2 410 39.3
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 5.6e-47 193.4 278 46.0
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 6.6e-40 169.9 210 51.4
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.5e-39 168.7 175 50.9
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.8e-38 164.5 125 71.2
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 2.0e-36 158.3 136 64.0
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 4.4e-36 157.1 271 39.9
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 2.3e-32 144.8 499 28.7
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 2.5e-23 114.8 419 26.3
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 9.0e-21 106.3 83 66.3
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 3.2e-18 97.8 145 52.4
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 3.6e-14 84.3 118 54.2
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 3.5e-09 67.8 98 41.8
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 7.9e-09 66.6 66 50.0
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 3.3e-07 61.2 66 45.5
PRCOL_00003186 Prasinoderma coloniale HOM05D000032 ORTHO05D006970 6.2e-06 57.0 44 54.5
TAR629G2997 Trochodendron aralioides HOM05D000874 ORTHO05D001267 6.2e-06 57.0 52 51.9
Lj5P134T60 Lonicera japonica HOM05D000874 ORTHO05D001267 8.1e-06 56.6 66 40.9
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 8.1e-06 56.6 89 40.4


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