Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G173300 Carya illinoinensis HOM05D003925 ORTHO05D004832 5.5e-233 810.8 482 100.0
CiPaw.05G005700 Carya illinoinensis HOM05D003925 ORTHO05D004832 2.0e-187 659.4 484 81.4
Haze_10061 Corylus avellana HOM05D003925 ORTHO05D004832 2.9e-181 639.0 485 75.5
PGR142G2211 Punica granatum HOM05D003925 ORTHO05D004832 2.1e-160 569.7 490 66.1
Duzib052G0643 Durio zibethinus HOM05D003925 ORTHO05D004832 6.9e-159 564.7 478 70.3
Thecc.02G024000 Theobroma cacao HOM05D003925 ORTHO05D004832 1.5e-158 563.5 478 73.0
Cpa.g.sc30.25 Carica papaya HOM05D003925 ORTHO05D004832 2.6e-158 562.8 477 70.6
COL.COLO4_17737 Corchorus olitorius HOM05D003925 ORTHO05D004832 3.4e-158 562.4 481 68.4
Manes.07G023200 Manihot esculenta HOM05D003925 ORTHO05D004832 1.3e-157 560.5 485 67.6
Duzib132G1049 Durio zibethinus HOM05D003925 ORTHO05D004832 8.4e-157 557.8 471 69.2
Gohir.A01G182900 Gossypium hirsutum HOM05D003925 ORTHO05D004832 4.2e-156 555.4 473 71.5
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 2.1e-155 553.1 388 82.0
Gohir.A04G132700 Gossypium hirsutum HOM05D003925 ORTHO05D004832 2.7e-155 552.7 478 65.3
ClCG10G007000 Citrullus lanatus HOM05D003925 ORTHO05D004832 3.5e-155 552.4 483 72.5
Gohir.D01G174000 Gossypium hirsutum HOM05D003925 ORTHO05D004832 3.5e-155 552.4 473 67.9
Hma1.2p1_0884F.1_g232530 Hydrangea macrophylla HOM05D003925 ORTHO05D004832 3.5e-155 552.4 495 67.3
Gorai.002G216100 Gossypium raimondii HOM05D003925 ORTHO05D004832 1.0e-154 550.8 473 67.7
MELO3C016507.2 Cucumis melo HOM05D003925 ORTHO05D004832 6.6e-154 548.1 486 68.3
Gorai.012G167900 Gossypium raimondii HOM05D003925 ORTHO05D004832 1.1e-153 547.4 474 66.2
Gohir.D04G176300 Gossypium hirsutum HOM05D003925 ORTHO05D004832 1.5e-153 547.0 474 66.0
Dinv19400 Davidia involucrata HOM05D003925 ORTHO05D004832 3.3e-153 545.8 482 63.3
CsaV3_3G006350 Cucumis sativus L. HOM05D003925 ORTHO05D004832 6.2e-152 541.6 486 67.9
Manes.10G119400 Manihot esculenta HOM05D003925 ORTHO05D004832 2.4e-151 539.7 491 66.6
Prupe.1G577500 Prunus persica HOM05D003925 ORTHO05D004832 5.3e-151 538.5 490 68.8
CAN.G798.55 Capsicum annuum HOM05D003925 ORTHO05D004832 1.7e-149 533.5 481 64.4
Potri.004G223000 Populus trichocarpa HOM05D003925 ORTHO05D004832 9.3e-148 527.7 483 71.6
Ciclev10000945m.g Citrus clementina HOM05D003925 ORTHO05D004832 2.1e-147 526.6 495 63.0
Actinidia06473 Actinidia chinensis HOM05D003925 ORTHO05D004832 2.7e-147 526.2 473 64.5
QL02p100243 Quercus lobata HOM05D003925 ORTHO05D004832 2.7e-147 526.2 522 62.6
CANSAT54G0877 Cannabis sativa HOM05D003925 ORTHO05D004832 4.6e-147 525.4 497 61.0
Sabra01G0168900 Salix brachista HOM05D003925 ORTHO05D004832 4.6e-147 525.4 481 67.8
PGSC0003DMG400024923 Solanum tuberosum HOM05D003925 ORTHO05D004832 6.0e-147 525.0 478 62.8
CSS0002231 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 7.9e-147 524.6 471 62.2
THA.LOC104800040 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 7.9e-147 524.6 483 67.5
Aa31LG4G9470 Aethionema arabicum HOM05D003925 ORTHO05D004832 1.0e-146 524.2 463 62.4
Actinidia39010 Actinidia chinensis HOM05D003925 ORTHO05D004832 3.0e-146 522.7 488 64.1
MD08G1240800 Malus domestica HOM05D003925 ORTHO05D004832 5.1e-146 521.9 481 67.2
TWI23G0121 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 8.7e-146 521.2 485 62.5
Actinidia00183 Actinidia chinensis HOM05D003925 ORTHO05D004832 1.1e-145 520.8 482 62.2
Nn1g08458 Nelumbo nucifera HOM05D003925 ORTHO05D004832 2.5e-145 519.6 488 59.8
Nn5g27797 Nelumbo nucifera HOM05D003925 ORTHO05D004832 7.4e-145 518.1 477 61.2
Lsat_1_v5_gn_7_76521 Lactuca sativa HOM05D003925 ORTHO05D004832 2.1e-144 516.5 488 58.8
vmacro19868 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 2.8e-144 516.2 486 66.9
Glyma.12G167500 Glycine max HOM05D003925 ORTHO05D004832 3.7e-144 515.8 476 61.3
SalBow3G3816 Salvia bowleyana HOM05D003925 ORTHO05D004832 3.7e-144 515.8 481 61.1
Sed0019914 Sechium edule HOM05D003925 ORTHO05D004832 3.7e-144 515.8 465 64.3
THA.LOC104799820 Tarenaya hassleriana HOM05D003925 ORTHO05D004832 3.7e-144 515.8 481 60.5
Eucgr.I02754 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.8e-144 515.4 498 65.1
TAR381G0375 Trochodendron aralioides HOM05D003925 ORTHO05D004832 4.8e-144 515.4 477 63.9
Phvul.006G218500 Phaseolus vulgaris HOM05D003925 ORTHO05D004832 1.1e-143 514.2 450 62.7
Atru.chr6.781 Acer truncatum HOM05D003925 ORTHO05D004832 3.1e-143 512.7 491 66.6
VMungo0540G0371 Vigna mungo HOM05D003925 ORTHO05D004832 5.3e-143 511.9 476 64.3
Atru.chr6.812 Acer truncatum HOM05D003925 ORTHO05D004832 6.9e-143 511.5 490 66.1
Medtr2g005930 Medicago truncatula HOM05D003925 ORTHO05D004832 9.0e-143 511.1 475 60.4
Psat1g223280 Pisum sativum HOM05D003925 ORTHO05D004832 2.0e-142 510.0 469 62.0
AL7G28890 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 2.6e-142 509.6 463 67.4
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 3.4e-142 509.2 397 68.3
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 4.5e-142 508.8 406 68.0
Nitab4.5_0002596g0090 Nicotiana tabacum HOM05D003925 ORTHO05D004832 5.8e-142 508.4 477 65.0
Carub.0007s1672 Capsella rubella HOM05D003925 ORTHO05D004832 7.6e-142 508.1 461 61.4
MD15G1434000 Malus domestica HOM05D003925 ORTHO05D004832 7.6e-142 508.1 383 74.4
Thhalv10024818m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 9.9e-142 507.7 489 63.2
Hund15482 Selenicereus undatus HOM05D003925 ORTHO05D004832 1.7e-141 506.9 484 61.6
TWI14G0879 Tripterygium wilfordii HOM05D003925 ORTHO05D004832 2.2e-141 506.5 491 61.9
MSTRG.5212 Avicennia marina HOM05D003925 ORTHO05D004832 2.9e-141 506.1 486 59.9
Actinidia26166 Actinidia chinensis HOM05D003925 ORTHO05D004832 6.4e-141 505.0 485 60.6
DCAR_006681 Daucus carota HOM05D003925 ORTHO05D004832 8.4e-141 504.6 482 58.7
FAN04G1563 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.9e-140 503.4 471 63.3
SGA_v2.0_scaffold42G15910 Striga asiatica HOM05D003925 ORTHO05D004832 2.5e-140 503.1 495 59.2
Sp7g22330 Schrenkiella parvula HOM05D003925 ORTHO05D004832 3.2e-140 502.7 490 66.9
FvH4_5g28340 Fragaria vesca HOM05D003925 ORTHO05D004832 4.2e-140 502.3 470 62.3
Aqoxy5G03033 Aquilegia oxysepala HOM05D003925 ORTHO05D004832 9.3e-140 501.1 484 58.1
Nitab4.5_0000948g0030 Nicotiana tabacum HOM05D003925 ORTHO05D004832 1.2e-139 500.7 477 63.9
Solyc01g103680.3 Solanum lycopersicum HOM05D003925 ORTHO05D004832 2.1e-139 500.0 478 61.3
CARHR231760 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.7e-139 499.6 462 61.3
C01p19670 Brassica napus HOM05D003925 ORTHO05D004832 3.5e-139 499.2 477 67.9
BolC1t01894H Brassica oleracea HOM05D003925 ORTHO05D004832 3.5e-139 499.2 477 67.9
Sopen01g046090 Solanum pennellii HOM05D003925 ORTHO05D004832 4.6e-139 498.8 478 62.3
AT4G24330 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 6.0e-139 498.4 481 65.1
Migut.N00826 Erythranthe guttata HOM05D003925 ORTHO05D004832 6.0e-139 498.4 491 59.9
Oeu023407.1 Olea europaea HOM05D003925 ORTHO05D004832 6.0e-139 498.4 490 61.0
Eucgr.L02024 Eucalyptus grandis HOM05D003925 ORTHO05D004832 1.3e-138 497.3 385 71.9
A01p15700 Brassica napus HOM05D003925 ORTHO05D004832 3.0e-138 496.1 476 68.9
BraA01t01508Z Brassica rapa HOM05D003925 ORTHO05D004832 3.0e-138 496.1 477 67.9
Lj6g0026503 Lotus japonicus HOM05D003925 ORTHO05D004832 3.9e-138 495.7 453 64.5
TPR.G2147 Trifolium pratense HOM05D003925 ORTHO05D004832 3.9e-138 495.7 473 59.8
RcHm_v2.0_Chr7g0220701 Rosa chinensis HOM05D003925 ORTHO05D004832 5.1e-138 495.4 477 65.4
arahy.Tifrunner.gnm1.ann1.0HG9JC Arachis hypogaea HOM05D003925 ORTHO05D004832 1.1e-137 494.2 477 68.1
Lalb_Chr15g0090731 Lupinus albus HOM05D003925 ORTHO05D004832 2.5e-137 493.0 472 63.8
EL10Ac6g14144 Beta vulgaris HOM05D003925 ORTHO05D004832 4.3e-137 492.3 475 63.2
Peaxi162Scf00011g00941 Petunia axillaris HOM05D003925 ORTHO05D004832 1.3e-136 490.7 480 62.5
Glyma.16G003600 Glycine max HOM05D003925 ORTHO05D004832 1.6e-136 490.3 479 58.7
Sc07g0004570 Simmondsia chinensis HOM05D003925 ORTHO05D004832 2.8e-136 489.6 478 59.6
Oeu000132.1 Olea europaea HOM05D003925 ORTHO05D004832 3.7e-136 489.2 491 57.0
HanXRQChr07g0187361 Helianthus annuus HOM05D003925 ORTHO05D004832 6.2e-136 488.4 483 56.5
MSTRG.16495 Avicennia marina HOM05D003925 ORTHO05D004832 1.1e-135 487.6 489 58.3
FAN18G2864 Fragaria x ananassa HOM05D003925 ORTHO05D004832 1.1e-135 487.6 485 59.8
Lsat_1_v5_gn_9_121141 Lactuca sativa HOM05D003925 ORTHO05D004832 3.1e-135 486.1 495 56.0
HanXRQChr06g0181341 Helianthus annuus HOM05D003925 ORTHO05D004832 4.0e-135 485.7 475 58.7
ATR0584G077 Amborella trichopoda HOM05D003925 ORTHO05D004832 9.0e-135 484.6 482 60.2
Ah.03g136840 Amaranthus hybridus HOM05D003925 ORTHO05D004832 2.6e-134 483.0 475 62.5
Carub.0008s0983 Capsella rubella HOM05D003925 ORTHO05D004832 2.6e-134 483.0 464 64.7
C07p53570 Brassica napus HOM05D003925 ORTHO05D004832 4.5e-134 482.3 482 63.7
PSO170G6240 Papaver somniferum HOM05D003925 ORTHO05D004832 4.5e-134 482.3 488 61.1
ECA240G1679 Erigeron canadensis HOM05D003925 ORTHO05D004832 7.6e-134 481.5 492 56.9
Sp6g11590 Schrenkiella parvula HOM05D003925 ORTHO05D004832 1.0e-133 481.1 460 60.9
A03p55280 Brassica napus HOM05D003925 ORTHO05D004832 1.7e-133 480.3 486 64.2
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 1.7e-133 480.3 491 57.4
AT5G49945 Arabidopsis thaliana HOM05D003925 ORTHO05D004832 2.2e-133 479.9 464 64.7
AL8G23900 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.4e-132 477.2 468 64.1
arahy.Tifrunner.gnm1.ann1.D6FTCL Arachis hypogaea HOM05D003925 ORTHO05D004832 2.5e-132 476.5 489 65.0
AUR62040618 Chenopodium quinoa HOM05D003925 ORTHO05D004832 2.5e-132 476.5 453 59.6
Aa31LG3G6740 Aethionema arabicum HOM05D003925 ORTHO05D004832 3.2e-132 476.1 481 62.4
CDE08G0951 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 5.5e-132 475.3 481 56.1
BraA03t11971Z Brassica rapa HOM05D003925 ORTHO05D004832 7.1e-132 474.9 467 61.0
MBI09_g03430_MAGBIO Magnolia biondii HOM05D003925 ORTHO05D004832 1.6e-131 473.8 472 62.7
BcaNung05636 Brassica carinata HOM05D003925 ORTHO05D004832 2.1e-131 473.4 482 62.9
BolC7t45848H Brassica oleracea HOM05D003925 ORTHO05D004832 2.1e-131 473.4 480 64.0
CSS0020156 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 2.7e-131 473.0 405 63.5
BcaC01g04841 Brassica carinata HOM05D003925 ORTHO05D004832 3.5e-131 472.6 459 64.3
AUR62041951 Chenopodium quinoa HOM05D003925 ORTHO05D004832 6.1e-131 471.9 401 64.6
BcaB01g02930 Brassica carinata HOM05D003925 ORTHO05D004832 6.7e-130 468.4 452 67.9
Thhalv10013427m.g Eutrema salsugineum HOM05D003925 ORTHO05D004832 1.1e-129 467.6 459 64.3
BolC3t15651H Brassica oleracea HOM05D003925 ORTHO05D004832 2.5e-129 466.5 467 63.0
PSO782G4904 Papaver somniferum HOM05D003925 ORTHO05D004832 3.3e-129 466.1 488 58.6
Rhsim11G0124300 Rhododendron simsii HOM05D003925 ORTHO05D004832 3.3e-129 466.1 499 55.9
C03p33290 Brassica napus HOM05D003925 ORTHO05D004832 5.7e-129 465.3 467 62.7
CARHR258770 Cardamine hirsuta HOM05D003925 ORTHO05D004832 2.2e-128 463.4 453 63.4
A03p27580 Brassica napus HOM05D003925 ORTHO05D004832 1.1e-127 461.1 454 62.3
BcaC06g32885 Brassica carinata HOM05D003925 ORTHO05D004832 1.8e-127 460.3 483 62.7
HanXRQChr16g0509421 Helianthus annuus HOM05D003925 ORTHO05D004832 6.9e-127 458.4 487 54.2
CSS0030901 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.0e-127 458.0 395 65.3
BraA03t14587Z Brassica rapa HOM05D003925 ORTHO05D004832 1.2e-126 457.6 479 64.3
Ca_00045_v3 Cicer arietinum L. HOM05D003925 ORTHO05D004832 3.4e-126 456.1 444 63.3
SEGI_07809 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 1.2e-123 447.6 482 50.6
Zm00001eb289240 Zea mays HOM05D003925 ORTHO05D004832 2.1e-123 446.8 470 56.0
Eucgr.L02026 Eucalyptus grandis HOM05D003925 ORTHO05D004832 4.3e-121 439.1 318 72.0
vmacro01723 Vaccinium macrocarpon HOM05D003925 ORTHO05D004832 4.3e-121 439.1 470 54.3
CDE06G0202 Ceratophyllum demersum HOM05D003925 ORTHO05D004832 2.4e-119 433.3 419 58.2
HPP92_013757 Vanilla planifolia HOM05D003925 ORTHO05D004832 6.9e-119 431.8 493 54.4
Zm00001eb348650 Zea mays HOM05D003925 ORTHO05D004832 2.9e-117 426.4 475 53.1
Os05g0432400 Oryza sativa ssp. japonica HOM05D003925 ORTHO05D004832 5.0e-117 425.6 381 65.6
Lj9C300G1 Lonicera japonica HOM05D003925 ORTHO05D004832 1.2e-115 421.0 427 56.2
SGA_v2.0_scaffold8G04435 Striga asiatica HOM05D003925 ORTHO05D004832 7.0e-111 405.2 421 59.1
CARHR231750 Cardamine hirsuta HOM05D003925 ORTHO05D004832 1.0e-109 401.4 267 75.3
Mapoly0037s0012 Marchantia polymorpha HOM05D003925 ORTHO05D004832 1.1e-100 371.3 490 45.7
SMO356G0110 Selaginella moellendorffii HOM05D003925 ORTHO05D004832 2.8e-96 356.7 380 52.4
BcaC09g50878 Brassica carinata HOM05D003925 ORTHO05D004832 5.9e-94 349.0 271 78.6
Pp3c5_6620 Physcomitrium patens HOM05D003925 ORTHO05D004832 4.2e-84 316.2 385 43.9
ECA236G3450 Erigeron canadensis HOM05D003925 ORTHO05D004832 3.0e-82 310.1 469 45.0
SEGI_11230 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 8.9e-82 308.5 336 50.3
GSVIVG01023266001 Vitis vinifera HOM05D003925 ORTHO05D004832 1.9e-60 237.7 195 82.1
Cc02_g23030 Coffea canephora HOM05D003925 ORTHO05D004832 4.7e-59 233.0 193 66.8
AagrBONN_evm.TU.Sc2ySwM_362.431 Anthoceros agrestis HOM05D003925 ORTHO05D004832 1.1e-58 231.9 354 42.1
SHI34757 Sapria himalayana HOM05D003925 ORTHO05D004832 3.3e-52 210.3 201 56.7
CBR_g4722 Chara braunii HOM05D003925 ORTHO05D004832 8.9e-50 202.2 362 35.4
BcaC01g04842 Brassica carinata HOM05D003925 ORTHO05D004832 5.6e-44 183.0 327 45.6
CAN.G697.8 Capsicum annuum HOM05D003925 ORTHO05D004832 1.3e-40 171.8 118 70.3
CSS0013131 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 9.6e-36 155.6 137 71.5
Cre02.g106300 Chlamydomonas reinhardtii HOM05D003925 ORTHO05D004832 6.9e-34 149.4 340 33.8
Migut.B00784 Erythranthe guttata HOM05D003925 ORTHO05D004832 5.8e-33 146.4 129 68.2
SEGI_10393 Sequoiadendron giganteum HOM05D003925 ORTHO05D004832 2.2e-32 144.4 147 51.0
Haze_10058 Corylus avellana HOM05D003925 ORTHO05D004832 3.8e-32 143.7 145 58.6
CSS0019842 Camellia sinensis var. sinensis HOM05D003925 ORTHO05D004832 4.9e-32 143.3 129 70.5
Lalb_Chr20g0123671 Lupinus albus HOM05D003925 ORTHO05D004832 6.4e-32 142.9 100 70.0
Lj6g0024462 Lotus japonicus HOM05D003925 ORTHO05D004832 9.6e-28 129.0 317 33.8
CARHR216310 Cardamine hirsuta HOM05D003925 ORTHO05D004832 4.0e-26 123.6 100 65.0
Cfa000173 Carpinus fangiana HOM05D000321 ORTHO05D000204 5.8e-25 119.8 140 67.1
Zm00001eb254380 Zea mays HOM05D002934 ORTHO05D004560 1.0e-21 109.0 137 41.6
Zm00001eb276420 Zea mays HOM05D002934 ORTHO05D004560 1.0e-21 109.0 137 41.6
MCO13G620 Micromonas commoda HOM05D003925 ORTHO05D004832 1.5e-20 105.1 273 29.3
AL3G33580 Arabidopsis lyrata HOM05D003925 ORTHO05D004832 1.5e-17 95.1 307 32.9
CAN.G386.33 Capsicum annuum HOM05D003925 ORTHO05D004832 1.3e-16 92.0 71 56.3
CAN.G963.3 Capsicum annuum HOM05D003925 ORTHO05D004832 3.1e-10 70.9 48 70.8
BolC8t48574H Brassica oleracea HOM05D003925 ORTHO05D004832 3.2e-07 60.8 127 37.0
Thecc.02G021600 Theobroma cacao HOM05D003925 ORTHO05D004832 7.9e-06 56.2 45 62.2


User provided reference genes

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