Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.5e-203 712.6 354 100.0
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.1e-145 517.7 331 78.5
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.6e-144 516.5 331 78.2
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 8.6e-143 510.8 335 76.4
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 9.6e-134 480.7 352 70.2
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 5.2e-132 474.9 353 67.4
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.2e-131 473.8 362 68.8
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 3.4e-131 472.2 353 68.3
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 4.4e-131 471.9 352 69.0
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.1e-129 467.2 352 70.2
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.4e-129 466.8 352 67.3
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 3.2e-129 465.7 345 69.3
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.2e-129 465.7 353 67.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 9.3e-129 464.2 352 66.8
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 7.8e-128 461.1 351 67.2
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.9e-127 458.8 353 66.3
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 6.6e-127 458.0 352 65.9
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 2.6e-123 446.0 356 63.8
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 4.5e-123 445.3 352 64.5
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 5.8e-123 444.9 351 64.7
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 5.8e-123 444.9 351 64.7
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.3e-122 443.7 351 63.8
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.9e-122 442.6 352 64.2
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 4.9e-122 441.8 354 65.3
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 8.4e-122 441.0 331 68.3
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 5.4e-121 438.3 351 63.5
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.2e-120 437.2 311 70.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.3e-119 433.0 353 62.9
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.9e-119 432.2 333 66.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.9e-118 429.9 352 63.4
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 6.2e-117 424.9 326 65.6
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.5e-115 418.7 353 60.1
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.7e-114 416.8 352 62.5
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 3.8e-114 415.6 351 62.4
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 7.1e-113 411.4 357 60.2
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 1.2e-112 410.6 379 57.0
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.6e-112 410.2 350 62.0
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 2.1e-112 409.8 351 59.8
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.1e-112 409.8 352 60.8
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 2.1e-112 409.8 354 59.6
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.0e-111 407.5 351 59.8
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 2.3e-111 406.4 352 59.7
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 6.7e-111 404.8 351 60.4
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 4.8e-109 398.7 378 56.6
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 2.0e-107 393.3 352 57.7
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.9e-106 389.4 354 58.2
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 3.8e-106 389.0 352 58.0
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.5e-105 386.3 350 56.9
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 5.5e-105 385.2 349 59.3
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 5.5e-105 385.2 354 57.6
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 9.3e-105 384.4 355 57.7
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.2e-104 384.0 355 57.7
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 1.2e-104 384.0 351 59.8
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.1e-104 383.3 352 57.1
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 2.7e-104 382.9 355 58.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 8.7e-103 377.9 352 57.7
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 1.5e-102 377.1 369 55.0
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.9e-102 376.7 350 54.9
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 3.3e-102 375.9 350 56.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 4.3e-102 375.6 358 57.3
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 7.4e-102 374.8 375 53.3
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.8e-101 372.9 354 55.9
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.1e-100 370.9 354 55.4
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.8e-100 370.2 376 53.5
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 5.3e-100 368.6 354 55.9
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 5.3e-100 368.6 332 57.8
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 5.3e-100 368.6 351 56.1
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 6.9e-100 368.2 336 57.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 2.0e-99 366.7 331 58.6
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.7e-98 363.6 350 56.3
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.8e-98 362.5 310 59.0
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.5e-98 361.7 335 57.0
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.1e-97 360.9 351 53.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 4.2e-97 359.0 351 55.6
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 5.5e-97 358.6 354 55.1
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 5.5e-97 358.6 354 55.1
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.5e-97 358.6 328 58.5
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.2e-97 358.2 310 61.0
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.2e-96 357.5 354 54.2
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.2e-96 357.5 316 60.8
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.0e-95 354.4 351 55.0
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.8e-95 353.6 354 53.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.8e-95 353.6 311 57.2
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.3e-95 353.2 310 60.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 6.7e-95 351.7 350 52.0
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.2e-93 346.7 359 51.0
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 3.7e-93 345.9 351 54.7
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.1e-92 342.8 350 53.4
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.3e-90 337.4 366 50.3
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.3e-90 337.4 353 51.8
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 7.9e-88 328.2 297 57.9
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 3.7e-85 319.3 349 50.1
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 7.0e-84 315.1 369 47.4
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.0e-83 313.5 361 47.9
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.0e-82 311.2 360 50.3
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.3e-82 310.8 345 51.3
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.9e-82 309.7 297 56.6
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 8.5e-82 308.1 350 47.7
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 3.6e-80 302.8 366 48.6
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 3.6e-80 302.8 350 48.6
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.4e-79 300.8 353 47.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 3.0e-79 299.7 350 49.1
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.0e-71 274.6 328 49.1
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.1e-65 254.6 268 48.5
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 4.2e-65 252.7 191 66.5
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.2e-61 240.4 350 39.4
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 7.0e-60 235.3 171 69.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.6e-56 224.2 415 37.3
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 3.6e-48 196.4 162 63.0
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 8.9e-47 191.8 242 42.1
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 5.8e-46 189.1 223 48.9
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.4e-38 163.3 118 67.8
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 3.7e-37 159.8 220 42.7
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.4e-36 157.1 111 68.5
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 9.2e-28 128.6 109 52.3
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 3.9e-26 123.2 107 48.6
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.5e-25 118.6 128 55.5
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 4.6e-19 99.8 102 47.1
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 2.4e-12 77.4 64 62.5
MD10G1121100 Malus domestica HOM05D006341 ORTHO05D000377 4.0e-07 60.1 41 68.3
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 4.5e-06 56.6 50 52.0


User provided reference genes

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