Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.7e-293 1010.7 491 100.0
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 1.1e-233 813.1 483 80.7
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.4e-230 801.2 465 82.4
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.2e-222 776.5 482 78.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 2.6e-222 775.4 482 78.2
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 9.0e-207 723.8 460 76.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.0e-197 693.7 478 72.4
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 6.7e-186 654.4 487 68.8
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.8e-184 649.0 486 65.0
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.1e-183 647.1 493 64.7
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 5.9e-174 614.8 506 63.6
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 5.5e-172 608.2 453 68.4
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 3.3e-169 599.0 487 64.9
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 5.7e-169 598.2 490 61.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.7e-169 597.4 487 64.5
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.7e-168 595.5 487 64.7
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-167 594.0 487 63.7
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.1e-164 583.9 456 64.5
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.9e-164 583.2 482 63.1
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 4.2e-164 582.0 482 62.9
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 8.8e-162 574.3 499 58.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.6e-158 563.5 490 58.4
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.6e-158 563.5 490 58.4
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.5e-158 562.4 466 63.5
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.9e-157 559.3 494 56.9
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.5e-156 556.2 445 63.4
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 2.3e-154 549.7 498 57.6
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.2e-153 547.4 482 59.1
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.5e-153 547.0 498 56.6
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 2.8e-152 542.7 437 60.6
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 1.4e-151 540.4 421 64.4
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.7e-150 536.2 499 55.5
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 2.7e-150 536.2 430 60.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 3.5e-150 535.8 493 54.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 4.5e-150 535.4 494 56.7
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 7.7e-150 534.6 443 60.3
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.8e-149 532.3 498 56.0
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 1.1e-148 530.8 512 55.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 2.5e-148 529.6 431 60.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.5e-148 529.6 439 59.0
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 4.2e-148 528.9 429 60.8
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.2e-147 527.3 493 56.8
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 1.6e-147 526.9 435 59.5
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 6.1e-147 525.0 504 55.6
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.1e-147 525.0 498 54.6
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.0e-146 524.2 455 58.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 1.8e-146 523.5 480 56.9
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 3.0e-146 522.7 447 57.0
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 3.0e-146 522.7 504 55.6
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 5.7e-145 518.5 440 57.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-144 516.9 494 54.3
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 3.7e-144 515.8 434 57.1
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 6.3e-144 515.0 498 55.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 6.3e-144 515.0 499 54.3
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.4e-143 513.8 485 55.7
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.4e-143 513.1 496 54.4
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.4e-143 513.1 440 57.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.6e-142 510.4 454 55.1
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 7.8e-142 508.1 458 55.5
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 6.6e-141 505.0 494 53.6
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 7.3e-140 501.5 432 58.3
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 1.6e-139 500.4 376 61.4
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 2.8e-139 499.6 376 61.7
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 8.9e-138 494.6 471 53.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 4.4e-137 492.3 361 66.2
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 2.2e-136 490.0 432 57.4
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 3.7e-136 489.2 481 52.0
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.4e-136 488.4 390 61.8
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-134 484.2 441 57.8
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.5e-132 476.5 441 56.5
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 3.3e-132 476.1 427 55.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 6.2e-131 471.9 429 55.7
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 2.3e-130 469.9 450 54.9
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.1e-130 469.5 373 60.9
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 8.9e-130 468.0 436 54.6
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 1.7e-128 463.8 468 52.6
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 8.3e-128 461.5 441 54.2
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.1e-127 461.1 433 55.7
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.2e-127 459.5 430 53.5
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.1e-127 459.1 450 53.3
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 7.1e-127 458.4 426 52.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.6e-126 457.2 379 58.3
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.1e-126 456.8 471 51.8
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 2.7e-126 456.4 379 58.8
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 7.3e-124 448.4 379 58.3
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 1.2e-123 447.6 429 54.1
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.6e-123 447.2 429 54.1
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 6.2e-123 445.3 388 57.7
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 6.2e-123 445.3 388 57.7
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 6.2e-123 445.3 388 57.7
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 4.0e-122 442.6 417 54.4
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 5.2e-122 442.2 384 57.6
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.1e-119 434.5 483 49.7
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 1.6e-118 430.6 491 48.5
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.7e-117 427.2 434 49.3
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 6.6e-117 425.2 437 53.1
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.5e-116 423.3 448 51.6
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.5e-113 414.1 415 52.0
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.5e-100 370.2 454 44.1
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.5e-92 343.6 492 42.3
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 2.5e-84 317.0 294 57.8
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 3.8e-80 303.1 361 46.3
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 9.0e-74 282.0 385 42.6
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.7e-72 277.7 261 54.0
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 5.5e-71 272.7 257 53.7
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.3e-69 267.3 205 60.0
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 1.0e-64 251.9 510 34.9
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 1.5e-60 238.0 487 34.1
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 4.1e-58 229.9 310 42.9
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 1.8e-50 204.5 399 34.3
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.5e-39 168.3 222 44.6
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.2e-33 148.7 110 66.4
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.0e-33 147.9 377 31.8
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 2.7e-33 147.5 377 30.8
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 3.6e-30 137.1 382 29.8
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 5.2e-29 133.3 132 53.8
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 8.9e-29 132.5 129 53.5
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.6e-28 131.0 481 30.1
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.2e-26 122.5 331 32.9
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.8e-22 110.9 226 36.3
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 5.4e-18 96.7 52 80.8
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.4e-12 77.4 219 30.6
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 8.6e-08 62.8 46 58.7


User provided reference genes

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