Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 0.0e+00 1462.6 812 100.0
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 0.0e+00 1135.2 810 78.6
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 3.2e-302 1041.6 822 72.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 7.9e-301 1036.9 812 71.6
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 2.0e-299 1032.3 862 70.2
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 7.7e-296 1020.4 833 67.8
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.2e-294 1015.0 813 73.7
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.4e-292 1009.6 813 73.7
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.8e-292 1009.2 812 73.5
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.3e-292 1008.8 806 70.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 1.1e-291 1006.5 809 73.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 7.0e-289 997.3 822 71.9
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 3.2e-286 988.4 835 65.6
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.4e-284 983.0 831 69.3
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 5.7e-283 977.6 824 68.7
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 9.8e-283 976.9 825 67.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 4.8e-282 974.5 824 68.0
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 4.1e-281 971.5 842 66.4
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.1e-281 971.5 810 69.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 4.1e-281 971.5 822 69.3
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 4.1e-281 971.5 849 68.4
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 4.5e-280 968.0 826 68.3
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.7e-279 966.1 829 66.9
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 2.9e-279 965.3 810 68.9
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.2e-277 959.9 790 67.7
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.0e-276 955.3 824 69.7
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 2.0e-275 952.6 834 66.1
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 8.3e-274 947.2 823 68.9
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 8.3e-274 947.2 816 67.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 5.4e-273 944.5 820 67.4
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.2e-272 943.3 812 69.0
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 3.5e-272 941.8 807 69.3
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 3.8e-271 938.3 805 64.3
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 3.0e-268 928.7 804 65.0
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.3e-266 923.3 813 63.6
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 1.3e-266 923.3 818 65.3
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 1.7e-266 922.9 812 66.5
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.7e-266 921.8 832 61.9
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 4.9e-266 921.4 850 66.1
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.4e-266 921.0 819 65.1
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 1.1e-265 920.2 816 64.8
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 1.1e-265 920.2 811 67.3
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.4e-265 919.8 816 63.5
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.8e-265 919.5 834 62.7
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 5.4e-265 917.9 816 66.7
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 9.2e-265 917.1 834 63.4
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 2.7e-264 915.6 824 64.3
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 7.8e-264 914.1 836 64.5
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.3e-263 913.3 801 64.3
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.5e-262 909.1 812 64.7
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.3e-262 908.3 802 64.8
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 7.3e-262 907.5 806 62.5
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.2e-261 906.7 815 63.9
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 3.6e-261 905.2 816 64.5
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.8e-260 901.0 812 65.3
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 2.2e-258 896.0 825 62.4
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.9e-258 895.6 813 62.2
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 4.9e-258 894.8 814 61.7
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.2e-256 890.2 815 64.5
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 1.6e-256 889.8 820 63.4
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 1.6e-256 889.8 824 63.3
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 6.0e-256 887.9 832 63.5
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.3e-255 886.7 837 60.6
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 6.6e-255 884.4 822 64.0
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 2.5e-254 882.5 821 63.1
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 9.5e-254 880.6 837 60.5
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.8e-253 879.0 817 62.8
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.4e-252 876.7 820 64.3
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 3.7e-250 868.6 796 63.4
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 4.6e-248 861.7 818 62.5
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.7e-247 859.8 787 62.9
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.5e-246 855.9 879 60.9
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.1e-244 850.5 784 61.5
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 8.9e-244 847.4 828 59.3
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 2.7e-240 835.9 822 62.3
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.3e-239 832.8 816 60.2
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 1.5e-238 830.1 818 61.1
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 1.9e-238 829.7 820 61.2
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 4.0e-236 822.0 814 58.8
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 5.2e-236 821.6 820 58.3
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 6.8e-236 821.2 836 60.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-232 810.4 814 57.6
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.5e-230 803.5 816 58.9
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 2.5e-230 802.7 687 69.3
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 6.4e-226 788.1 766 58.9
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 7.4e-222 774.6 658 70.5
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.7e-218 763.5 814 55.9
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 9.6e-214 747.7 837 55.8
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 4.8e-213 745.3 815 55.8
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 2.4e-212 743.0 838 52.5
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 5.8e-211 738.4 789 54.5
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.4e-209 733.8 819 56.8
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 2.5e-209 733.0 838 54.9
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 7.1e-209 731.5 819 56.7
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 1.4e-204 717.2 833 52.9
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.4e-203 712.6 814 53.4
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 2.9e-202 709.5 819 54.2
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 7.9e-200 701.4 821 53.0
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.9e-200 701.4 817 55.3
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.3e-197 691.8 808 51.0
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 9.0e-196 688.0 829 51.5
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 6.5e-194 681.8 812 53.6
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 2.5e-193 679.9 916 50.5
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.2e-186 656.8 799 49.4
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 9.4e-185 651.4 799 49.2
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.0e-183 647.9 808 49.0
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.4e-180 636.7 818 47.9
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 3.5e-179 632.9 814 48.3
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.5e-174 617.5 850 46.6
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.2e-170 603.6 768 49.7
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 3.6e-168 596.3 585 65.3
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.8e-167 594.0 439 69.2
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 3.8e-162 576.2 561 65.4
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 5.2e-159 565.8 636 59.6
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 5.6e-153 545.8 712 50.0
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 8.0e-152 542.0 693 48.6
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 1.2e-144 518.1 738 48.2
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 4.4e-142 509.6 466 62.9
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.6e-134 483.8 477 63.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 9.8e-134 481.9 854 43.8
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 1.2e-131 474.9 884 40.6
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 2.3e-127 460.7 536 52.6
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 6.8e-127 459.1 313 75.4
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 7.8e-123 445.7 423 69.7
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 1.3e-122 444.9 348 66.4
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 3.9e-122 443.4 530 55.5
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 2.4e-103 380.9 833 38.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.1e-103 380.6 277 71.1
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 4.0e-103 380.2 456 49.1
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 8.7e-98 362.5 526 44.1
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 8.7e-90 335.9 901 32.6
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 5.7e-89 333.2 516 40.1
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.7e-85 321.6 654 38.2
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 9.3e-84 315.8 449 44.8
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.2e-83 315.5 791 31.7
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 6.3e-64 250.0 362 48.9
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.2e-62 245.7 390 51.5
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 4.4e-57 227.3 333 54.4
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.7e-56 225.3 202 67.3
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-56 225.3 408 41.4
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 3.7e-56 224.2 805 28.1
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.8e-45 187.6 328 41.5
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.5e-44 183.0 309 43.0
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 1.2e-38 166.0 134 61.2
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 2.8e-35 154.8 135 63.7
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 1.4e-31 142.5 137 56.2
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.3e-28 130.2 142 54.2
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 6.2e-27 127.1 130 57.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-24 117.9 350 33.7
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.7e-24 117.9 303 34.3
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.9e-24 117.5 214 39.7
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 2.1e-22 112.1 110 53.6
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.6e-22 110.9 126 54.0
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 4.6e-22 110.9 96 60.4
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-21 108.6 595 23.9
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 3.0e-21 108.2 220 38.6
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.3e-20 104.8 85 61.2
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.5e-20 103.2 120 48.3
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 6.2e-19 100.5 80 62.5
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.2e-19 100.5 146 45.9
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.2e-18 97.4 256 32.4
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-15 89.7 70 70.0
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 3.5e-14 84.7 71 67.6
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 4.6e-14 84.3 180 37.2
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.9e-13 81.3 80 58.8
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.5e-12 79.3 72 55.6
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-12 79.3 345 29.6
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.9e-12 79.0 155 39.4
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 1.6e-11 75.9 65 69.2
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 1.1e-10 73.2 79 53.2
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.4e-10 72.8 67 52.2
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 1.4e-10 72.8 124 40.3
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 5.8e-09 67.4 51 70.6
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.8e-09 67.4 65 53.8
HPP92_028492 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.9e-08 65.1 142 35.2
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 6.4e-08 63.9 115 40.9
HPP92_006544 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.4e-08 63.5 154 37.0
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.4e-07 62.8 57 57.9
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 1.9e-07 62.4 81 46.9
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 2.4e-07 62.0 71 45.1
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-07 61.2 38 81.6
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 1.2e-06 59.7 41 68.3
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 4.6e-06 57.8 117 35.9
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 4.6e-06 57.8 74 52.7


User provided reference genes

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