Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 3.7e-213 744.6 373 100.0
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 9.7e-153 543.9 373 76.7
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 3.6e-147 525.4 378 73.8
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 3.7e-128 462.2 353 65.2
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 3.5e-126 455.7 353 63.7
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.5e-124 450.3 383 62.7
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 5.5e-124 448.4 369 63.7
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 8.0e-123 444.5 380 62.9
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.8e-122 443.4 374 62.8
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 3.0e-122 442.6 381 63.3
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 5.2e-122 441.8 377 62.3
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 6.8e-122 441.4 376 63.6
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 1.2e-121 440.7 381 62.7
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.5e-121 440.3 378 62.4
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 7.5e-121 438.0 380 62.4
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 4.1e-119 432.2 383 61.1
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 5.4e-119 431.8 376 61.2
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 2.0e-118 429.9 383 60.8
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 2.7e-118 429.5 321 66.4
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 5.0e-117 425.2 381 58.3
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 6.6e-117 424.9 290 70.0
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 6.6e-117 424.9 368 60.6
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.9e-116 423.3 382 58.9
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.9e-116 423.3 370 60.0
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.5e-116 422.9 373 59.2
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 3.3e-116 422.5 383 60.3
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 1.4e-114 417.2 295 69.5
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.4e-114 417.2 376 58.2
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.8e-114 416.8 384 58.1
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 2.3e-114 416.4 375 58.1
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.4e-113 412.5 344 61.9
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.4e-111 407.1 383 56.7
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 2.4e-111 406.4 364 56.6
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 9.2e-111 404.4 275 69.8
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 1.2e-110 404.1 300 67.0
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 2.0e-110 403.3 295 66.8
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 4.6e-110 402.1 299 66.9
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 3.9e-109 399.1 299 64.5
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 1.5e-108 397.1 295 65.4
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 5.6e-108 395.2 281 66.9
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 9.5e-108 394.4 298 66.4
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.2e-107 394.0 326 59.2
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 1.2e-107 394.0 298 65.8
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.2e-107 394.0 327 61.2
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 3.6e-107 392.5 374 54.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 3.6e-107 392.5 390 53.8
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.1e-106 391.0 274 68.2
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 3.1e-106 389.4 380 55.5
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 4.0e-106 389.0 336 60.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 5.2e-106 388.7 382 53.7
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 5.2e-106 388.7 313 59.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 2.9e-104 382.9 376 55.1
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 8.3e-104 381.3 285 64.6
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 1.9e-103 380.2 344 55.5
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 5.4e-103 378.6 326 58.9
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 7.0e-103 378.3 323 58.2
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 7.0e-103 378.3 347 55.6
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 1.6e-102 377.1 365 54.5
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 3.5e-102 375.9 365 54.5
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 1.0e-101 374.4 326 57.4
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 3.0e-101 372.9 362 54.1
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 6.6e-101 371.7 307 59.9
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 3.3e-100 369.4 336 59.5
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 2.1e-99 366.7 385 52.5
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 2.8e-99 366.3 326 57.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.8e-99 366.3 293 61.1
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 6.2e-99 365.2 367 51.8
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 1.8e-98 363.6 348 54.9
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.0e-98 362.5 283 65.4
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 9.9e-97 357.8 331 55.3
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 2.2e-96 356.7 354 52.8
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 3.7e-96 355.9 355 53.0
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 4.9e-96 355.5 325 54.2
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 4.9e-96 355.5 371 51.8
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 8.3e-96 354.8 358 55.9
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 5.4e-95 352.1 300 58.0
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 5.4e-95 352.1 300 58.0
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 7.1e-95 351.7 339 55.2
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.3e-93 346.7 338 54.7
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.9e-92 343.6 381 52.8
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 5.6e-92 342.0 346 52.9
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 4.7e-91 339.0 260 65.4
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 8.9e-90 334.7 423 49.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 2.6e-89 333.2 238 68.5
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 4.4e-89 332.4 275 62.2
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 3.8e-88 329.3 335 52.5
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 5.4e-87 325.5 245 64.5
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 3.3e-84 316.2 335 49.0
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.4e-82 310.1 293 56.7
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.1e-74 284.6 284 51.1
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 8.4e-72 275.0 352 43.8
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 4.3e-60 236.1 163 71.2
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 2.1e-59 233.8 392 37.2
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 2.2e-56 223.8 312 39.7
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 7.1e-55 218.8 312 41.7
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.0e-54 215.7 158 65.8
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 8.2e-51 205.3 171 61.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 7.9e-46 188.7 228 45.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.1e-44 184.9 305 36.7
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 6.5e-40 169.1 291 34.0
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.4e-37 161.4 187 50.3
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.0e-37 160.2 135 62.2
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 2.6e-33 147.1 104 68.3
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 2.7e-30 137.1 84 73.8
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 7.4e-28 129.0 129 54.3
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.9e-24 117.1 79 69.6
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 1.8e-21 107.8 313 29.7
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 2.0e-17 94.4 276 26.8
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.2e-06 58.5 75 49.3


User provided reference genes

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